Protein–RNA interactions for Protein: Q9BWF2

TRAIP, E3 ubiquitin-protein ligase TRAIP, humanhuman

Predictions only

Length 469 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIPQ9BWF2 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC6.43□□□□□ -1.38
TRAIPQ9BWF2 RPL7P57-201ENST00000423238 740 ntBASIC6.43□□□□□ -1.38
TRAIPQ9BWF2 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC6.43□□□□□ -1.38
TRAIPQ9BWF2 AL121871.1-201ENST00000443413 436 ntBASIC6.43□□□□□ -1.38
TRAIPQ9BWF2 RPL36AP39-201ENST00000445859 318 ntBASIC6.43□□□□□ -1.38
TRAIPQ9BWF2 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC6.43□□□□□ -1.38
TRAIPQ9BWF2 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC6.43□□□□□ -1.38
TRAIPQ9BWF2 AL136038.1-201ENST00000497246 351 ntBASIC6.43□□□□□ -1.38
TRAIPQ9BWF2 AC093824.1-201ENST00000508796 343 ntBASIC6.43□□□□□ -1.38
TRAIPQ9BWF2 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC6.43□□□□□ -1.38
TRAIPQ9BWF2 SCARNA21.2-201ENST00000516600 166 ntBASIC6.43□□□□□ -1.38
TRAIPQ9BWF2 RNU6-798P-201ENST00000516912 103 ntBASIC6.43□□□□□ -1.38
TRAIPQ9BWF2 AC008694.2-201ENST00000517591 306 ntBASIC6.43□□□□□ -1.38
TRAIPQ9BWF2 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC6.43□□□□□ -1.38
TRAIPQ9BWF2 AC105233.3-201ENST00000531125 744 ntBASIC6.43□□□□□ -1.38
TRAIPQ9BWF2 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC6.43□□□□□ -1.38
TRAIPQ9BWF2 MYL6-213ENST00000549017 502 ntTSL 3 BASIC6.43□□□□□ -1.38
TRAIPQ9BWF2 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC6.43□□□□□ -1.38
TRAIPQ9BWF2 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC6.43□□□□□ -1.38
TRAIPQ9BWF2 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC6.43□□□□□ -1.38
TRAIPQ9BWF2 AC068135.2-201ENST00000569293 1028 ntBASIC6.43□□□□□ -1.38
TRAIPQ9BWF2 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC6.43□□□□□ -1.38
TRAIPQ9BWF2 AC006272.2-201ENST00000594725 163 ntBASIC6.43□□□□□ -1.38
TRAIPQ9BWF2 FAM27E4-201ENST00000605259 342 ntBASIC6.43□□□□□ -1.38
TRAIPQ9BWF2 AC007038.2-201ENST00000608095 740 ntBASIC6.43□□□□□ -1.38
TRAIPQ9BWF2 MLECP1-201ENST00000615893 709 ntBASIC6.43□□□□□ -1.38
TRAIPQ9BWF2 AC012150.2-201ENST00000621300 544 ntBASIC6.43□□□□□ -1.38
TRAIPQ9BWF2 AL356585.4-201ENST00000623078 1229 ntBASIC6.43□□□□□ -1.38
TRAIPQ9BWF2 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC6.43□□□□□ -1.38
TRAIPQ9BWF2 MIR6715B-201ENST00000637172 77 ntBASIC6.43□□□□□ -1.38
TRAIPQ9BWF2 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
TRAIPQ9BWF2 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC6.43□□□□□ -1.38
TRAIPQ9BWF2 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC6.43□□□□□ -1.38
TRAIPQ9BWF2 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
TRAIPQ9BWF2 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
TRAIPQ9BWF2 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC6.43□□□□□ -1.38
TRAIPQ9BWF2 AC100757.1-201ENST00000616872 1835 ntBASIC6.43□□□□□ -1.38
TRAIPQ9BWF2 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
TRAIPQ9BWF2 AC144833.1-201ENST00000567953 4089 ntBASIC6.43□□□□□ -1.38
TRAIPQ9BWF2 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC6.43□□□□□ -1.38
TRAIPQ9BWF2 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC6.43□□□□□ -1.38
TRAIPQ9BWF2 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC6.43□□□□□ -1.38
TRAIPQ9BWF2 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
TRAIPQ9BWF2 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
TRAIPQ9BWF2 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
TRAIPQ9BWF2 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
TRAIPQ9BWF2 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC6.42□□□□□ -1.38
TRAIPQ9BWF2 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC6.42□□□□□ -1.38
TRAIPQ9BWF2 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
TRAIPQ9BWF2 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
TRAIPQ9BWF2 RNA5SP46-201ENST00000362370 120 ntBASIC6.42□□□□□ -1.38
TRAIPQ9BWF2 RNU6-181P-201ENST00000363225 107 ntBASIC6.42□□□□□ -1.38
TRAIPQ9BWF2 U3.25-201ENST00000391209 220 ntBASIC6.42□□□□□ -1.38
TRAIPQ9BWF2 FGFR1OP2P1-201ENST00000395943 500 ntBASIC6.42□□□□□ -1.38
TRAIPQ9BWF2 RN7SKP285-201ENST00000410137 318 ntBASIC6.42□□□□□ -1.38
TRAIPQ9BWF2 AL137014.1-201ENST00000420490 1226 ntBASIC6.42□□□□□ -1.38
TRAIPQ9BWF2 CHIAP3-201ENST00000423668 1133 ntBASIC6.42□□□□□ -1.38
TRAIPQ9BWF2 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC6.42□□□□□ -1.38
TRAIPQ9BWF2 BRWD1P3-201ENST00000428816 390 ntBASIC6.42□□□□□ -1.38
TRAIPQ9BWF2 AC126120.1-201ENST00000431082 470 ntBASIC6.42□□□□□ -1.38
TRAIPQ9BWF2 AC016712.1-201ENST00000431088 378 ntBASIC6.42□□□□□ -1.38
TRAIPQ9BWF2 AC007556.1-201ENST00000432133 307 ntTSL 2 BASIC6.42□□□□□ -1.38
TRAIPQ9BWF2 RPL35AP22-201ENST00000436855 335 ntBASIC6.42□□□□□ -1.38
TRAIPQ9BWF2 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC6.42□□□□□ -1.38
TRAIPQ9BWF2 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC6.42□□□□□ -1.38
TRAIPQ9BWF2 MTCO3P38-201ENST00000468910 766 ntBASIC6.42□□□□□ -1.38
TRAIPQ9BWF2 RPL31P58-201ENST00000469001 379 ntBASIC6.42□□□□□ -1.38
TRAIPQ9BWF2 AC090686.1-201ENST00000481577 749 ntBASIC6.42□□□□□ -1.38
TRAIPQ9BWF2 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC6.42□□□□□ -1.38
TRAIPQ9BWF2 RPL35P6-201ENST00000490024 372 ntBASIC6.42□□□□□ -1.38
TRAIPQ9BWF2 RPL15P21-201ENST00000495592 567 ntBASIC6.42□□□□□ -1.38
TRAIPQ9BWF2 AC108145.1-201ENST00000503770 153 ntBASIC6.42□□□□□ -1.38
TRAIPQ9BWF2 MYL12BP2-201ENST00000503948 512 ntBASIC6.42□□□□□ -1.38
TRAIPQ9BWF2 RNU6-528P-201ENST00000516926 100 ntBASIC6.42□□□□□ -1.38
TRAIPQ9BWF2 RNU6-445P-201ENST00000516949 107 ntBASIC6.42□□□□□ -1.38
TRAIPQ9BWF2 AC107934.1-201ENST00000522215 217 ntBASIC6.42□□□□□ -1.38
TRAIPQ9BWF2 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC6.42□□□□□ -1.38
TRAIPQ9BWF2 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC6.42□□□□□ -1.38
TRAIPQ9BWF2 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC6.42□□□□□ -1.38
TRAIPQ9BWF2 PDCD5P1-201ENST00000543528 309 ntBASIC6.42□□□□□ -1.38
TRAIPQ9BWF2 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC6.42□□□□□ -1.38
TRAIPQ9BWF2 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC6.42□□□□□ -1.38
TRAIPQ9BWF2 AC090022.1-201ENST00000546569 311 ntBASIC6.42□□□□□ -1.38
TRAIPQ9BWF2 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC6.42□□□□□ -1.38
TRAIPQ9BWF2 AC022404.1-201ENST00000555320 273 ntBASIC6.42□□□□□ -1.38
TRAIPQ9BWF2 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC6.42□□□□□ -1.38
TRAIPQ9BWF2 HMGB3P26-201ENST00000560051 582 ntBASIC6.42□□□□□ -1.38
TRAIPQ9BWF2 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC6.42□□□□□ -1.38
TRAIPQ9BWF2 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC6.42□□□□□ -1.38
TRAIPQ9BWF2 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC6.42□□□□□ -1.38
TRAIPQ9BWF2 SNORD95-201ENST00000579879 68 ntBASIC6.42□□□□□ -1.38
TRAIPQ9BWF2 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC6.42□□□□□ -1.38
TRAIPQ9BWF2 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
TRAIPQ9BWF2 AC025857.2-201ENST00000602711 238 ntBASIC6.42□□□□□ -1.38
TRAIPQ9BWF2 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC6.42□□□□□ -1.38
TRAIPQ9BWF2 AC008277.2-201ENST00000605196 797 ntBASIC6.42□□□□□ -1.38
TRAIPQ9BWF2 AC022467.1-201ENST00000614738 749 ntBASIC6.42□□□□□ -1.38
TRAIPQ9BWF2 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC6.42□□□□□ -1.38
TRAIPQ9BWF2 BMS1P21-201ENST00000634565 365 ntBASIC6.42□□□□□ -1.38
TRAIPQ9BWF2 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 89.3 ms