Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 RNU6-249P-201ENST00000363016 102 ntBASIC4.31□□□□□ -1.72
ABCA3Q99758 SNORD74.4-201ENST00000364129 80 ntBASIC4.31□□□□□ -1.72
ABCA3Q99758 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC4.31□□□□□ -1.72
ABCA3Q99758 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC4.31□□□□□ -1.72
ABCA3Q99758 AC006989.1-201ENST00000427212 131 ntBASIC4.31□□□□□ -1.72
ABCA3Q99758 RPS26P47-201ENST00000427219 348 ntBASIC4.31□□□□□ -1.72
ABCA3Q99758 IFNNP1-201ENST00000429219 553 ntBASIC4.31□□□□□ -1.72
ABCA3Q99758 RPS26P3-201ENST00000470205 348 ntBASIC4.31□□□□□ -1.72
ABCA3Q99758 AC004057.1-201ENST00000485827 348 ntBASIC4.31□□□□□ -1.72
ABCA3Q99758 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC4.31□□□□□ -1.72
ABCA3Q99758 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC4.31□□□□□ -1.72
ABCA3Q99758 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC4.31□□□□□ -1.72
ABCA3Q99758 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC4.31□□□□□ -1.72
ABCA3Q99758 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC4.31□□□□□ -1.72
ABCA3Q99758 AL596275.2-204ENST00000641628 552 ntBASIC4.31□□□□□ -1.72
ABCA3Q99758 AL596275.2-206ENST00000641957 626 ntBASIC4.31□□□□□ -1.72
ABCA3Q99758 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC4.31□□□□□ -1.72
ABCA3Q99758 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC4.31□□□□□ -1.72
ABCA3Q99758 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
ABCA3Q99758 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.31□□□□□ -1.72
ABCA3Q99758 BCLAF1P1-201ENST00000505813 2752 ntBASIC4.31□□□□□ -1.72
ABCA3Q99758 AL359693.1-201ENST00000614959 2407 ntBASIC4.31□□□□□ -1.72
ABCA3Q99758 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC4.3□□□□□ -1.72
ABCA3Q99758 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
ABCA3Q99758 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
ABCA3Q99758 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
ABCA3Q99758 AC002524.1-201ENST00000411687 547 ntBASIC4.3□□□□□ -1.72
ABCA3Q99758 AC012065.2-201ENST00000421295 375 ntBASIC4.3□□□□□ -1.72
ABCA3Q99758 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC4.3□□□□□ -1.72
ABCA3Q99758 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC4.3□□□□□ -1.72
ABCA3Q99758 AF228730.2-201ENST00000438784 848 ntBASIC4.3□□□□□ -1.72
ABCA3Q99758 RPS24P13-201ENST00000442520 397 ntBASIC4.3□□□□□ -1.72
ABCA3Q99758 FCF1P3-201ENST00000496394 590 ntBASIC4.3□□□□□ -1.72
ABCA3Q99758 AC093755.1-201ENST00000512950 1023 ntBASIC4.3□□□□□ -1.72
ABCA3Q99758 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC4.3□□□□□ -1.72
ABCA3Q99758 AC067852.4-201ENST00000590314 478 ntBASIC4.3□□□□□ -1.72
ABCA3Q99758 AP003485.2-201ENST00000623636 610 ntBASIC4.3□□□□□ -1.72
ABCA3Q99758 AL451142.2-201ENST00000429076 2090 ntBASIC4.3□□□□□ -1.72
ABCA3Q99758 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
ABCA3Q99758 AC139713.2-215ENST00000641428 5037 ntBASIC4.3□□□□□ -1.72
ABCA3Q99758 AC083843.2-201ENST00000568248 6253 ntBASIC4.3□□□□□ -1.72
ABCA3Q99758 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC4.3□□□□□ -1.72
ABCA3Q99758 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
ABCA3Q99758 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
ABCA3Q99758 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
ABCA3Q99758 AC108206.1-201ENST00000570186 4159 ntBASIC4.3□□□□□ -1.72
ABCA3Q99758 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
ABCA3Q99758 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC4.29□□□□□ -1.72
ABCA3Q99758 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC4.29□□□□□ -1.72
ABCA3Q99758 RNU6-283P-201ENST00000364788 107 ntBASIC4.29□□□□□ -1.72
ABCA3Q99758 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
ABCA3Q99758 RNA5SP184-201ENST00000411071 108 ntBASIC4.29□□□□□ -1.72
ABCA3Q99758 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC4.29□□□□□ -1.72
ABCA3Q99758 AC011242.1-201ENST00000433596 1158 ntBASIC4.29□□□□□ -1.72
ABCA3Q99758 AC108734.1-201ENST00000439549 399 ntBASIC4.29□□□□□ -1.72
ABCA3Q99758 AC005229.2-201ENST00000456995 399 ntBASIC4.29□□□□□ -1.72
ABCA3Q99758 TTC26-205ENST00000474035 1193 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
ABCA3Q99758 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
ABCA3Q99758 AL157394.1-201ENST00000562983 1224 ntBASIC4.29□□□□□ -1.72
ABCA3Q99758 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
ABCA3Q99758 AL136360.1-201ENST00000503377 1900 ntBASIC4.29□□□□□ -1.72
ABCA3Q99758 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC4.29□□□□□ -1.72
ABCA3Q99758 AC073073.2-201ENST00000609827 2578 ntBASIC4.29□□□□□ -1.72
ABCA3Q99758 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
ABCA3Q99758 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
ABCA3Q99758 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
ABCA3Q99758 C3orf49-201ENST00000295896 1292 ntAPPRIS P5 TSL 2 BASIC4.29□□□□□ -1.72
ABCA3Q99758 RN7SKP222-201ENST00000410651 315 ntBASIC4.29□□□□□ -1.72
ABCA3Q99758 AC007899.1-201ENST00000412776 775 ntBASIC4.29□□□□□ -1.72
ABCA3Q99758 OR2X1P-201ENST00000421144 687 ntBASIC4.29□□□□□ -1.72
ABCA3Q99758 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC4.29□□□□□ -1.72
ABCA3Q99758 AL109933.2-201ENST00000452651 260 ntBASIC4.29□□□□□ -1.72
ABCA3Q99758 RPS4XP13-201ENST00000483219 789 ntBASIC4.29□□□□□ -1.72
ABCA3Q99758 RFPL4AP5-201ENST00000514977 504 ntBASIC4.29□□□□□ -1.72
ABCA3Q99758 TWF1-207ENST00000548315 1170 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
ABCA3Q99758 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC4.29□□□□□ -1.72
ABCA3Q99758 AL137790.1-201ENST00000634283 177 ntBASIC4.29□□□□□ -1.72
ABCA3Q99758 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
ABCA3Q99758 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC4.29□□□□□ -1.72
ABCA3Q99758 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC4.29□□□□□ -1.72
ABCA3Q99758 MAPK6PS3-201ENST00000403865 2162 ntBASIC4.29□□□□□ -1.72
ABCA3Q99758 AC096644.4-201ENST00000563417 2912 ntBASIC4.29□□□□□ -1.72
ABCA3Q99758 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
ABCA3Q99758 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC4.28□□□□□ -1.72
ABCA3Q99758 RMST-202ENST00000541282 2099 ntTSL 2 BASIC4.28□□□□□ -1.72
ABCA3Q99758 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
ABCA3Q99758 IFI16-205ENST00000368132 2704 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
ABCA3Q99758 CEP170P1-201ENST00000502249 4587 ntBASIC4.28□□□□□ -1.72
ABCA3Q99758 OR5J1P-201ENST00000313544 939 ntBASIC4.28□□□□□ -1.72
ABCA3Q99758 OR56A5-201ENST00000340110 738 ntBASIC4.28□□□□□ -1.72
ABCA3Q99758 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC4.28□□□□□ -1.72
ABCA3Q99758 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC4.28□□□□□ -1.72
ABCA3Q99758 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC4.28□□□□□ -1.72
ABCA3Q99758 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC4.28□□□□□ -1.72
ABCA3Q99758 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC4.28□□□□□ -1.72
ABCA3Q99758 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC4.28□□□□□ -1.72
ABCA3Q99758 AC018371.1-201ENST00000584560 640 ntTSL 3 BASIC4.28□□□□□ -1.72
ABCA3Q99758 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC4.28□□□□□ -1.72
ABCA3Q99758 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
ABCA3Q99758 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 106.2 ms