Protein–RNA interactions for Protein: Q96QK1

VPS35, Vacuolar protein sorting-associated protein 35, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS35Q96QK1 RPL37P6-202ENST00000464216 403 ntBASIC3.91□□□□□ -1.78
VPS35Q96QK1 PPIAP15-201ENST00000479662 484 ntBASIC3.91□□□□□ -1.78
VPS35Q96QK1 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC3.91□□□□□ -1.78
VPS35Q96QK1 AC073522.1-201ENST00000483312 377 ntBASIC3.91□□□□□ -1.78
VPS35Q96QK1 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC3.91□□□□□ -1.78
VPS35Q96QK1 PDLIM1P4-201ENST00000504327 1006 ntBASIC3.91□□□□□ -1.78
VPS35Q96QK1 AP000462.1-201ENST00000535704 818 ntTSL 3 BASIC3.91□□□□□ -1.78
VPS35Q96QK1 AC138393.1-206ENST00000540997 1886 ntBASIC3.91□□□□□ -1.78
VPS35Q96QK1 AC009396.1-201ENST00000553628 1079 ntTSL 2 BASIC3.91□□□□□ -1.78
VPS35Q96QK1 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC3.91□□□□□ -1.78
VPS35Q96QK1 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC3.91□□□□□ -1.78
VPS35Q96QK1 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC3.91□□□□□ -1.78
VPS35Q96QK1 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC3.91□□□□□ -1.78
VPS35Q96QK1 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC3.91□□□□□ -1.78
VPS35Q96QK1 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC3.91□□□□□ -1.78
VPS35Q96QK1 AC120057.2-201ENST00000571520 271 ntBASIC3.91□□□□□ -1.78
VPS35Q96QK1 AC022916.3-201ENST00000592961 742 ntBASIC3.91□□□□□ -1.78
VPS35Q96QK1 VN1R85P-201ENST00000601587 426 ntBASIC3.91□□□□□ -1.78
VPS35Q96QK1 AC128687.2-201ENST00000609657 566 ntBASIC3.91□□□□□ -1.78
VPS35Q96QK1 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC3.91□□□□□ -1.78
VPS35Q96QK1 RNU6-156P-201ENST00000621869 107 ntBASIC3.91□□□□□ -1.78
VPS35Q96QK1 AC097460.3-201ENST00000623099 442 ntBASIC3.91□□□□□ -1.78
VPS35Q96QK1 AC073592.7-201ENST00000623659 507 ntBASIC3.91□□□□□ -1.78
VPS35Q96QK1 AL590396.2-201ENST00000636511 1041 ntBASIC3.91□□□□□ -1.78
VPS35Q96QK1 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
VPS35Q96QK1 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC3.91□□□□□ -1.78
VPS35Q96QK1 AP002001.2-201ENST00000529025 1469 ntBASIC3.91□□□□□ -1.78
VPS35Q96QK1 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
VPS35Q96QK1 AC008432.1-201ENST00000615912 1320 ntBASIC3.91□□□□□ -1.78
VPS35Q96QK1 MFSD8-213ENST00000641134 1327 ntBASIC3.91□□□□□ -1.78
VPS35Q96QK1 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
VPS35Q96QK1 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC3.9□□□□□ -1.78
VPS35Q96QK1 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC3.9□□□□□ -1.78
VPS35Q96QK1 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.9□□□□□ -1.78
VPS35Q96QK1 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC3.9□□□□□ -1.78
VPS35Q96QK1 ACEA_U3.1-201ENST00000363057 217 ntBASIC3.9□□□□□ -1.79
VPS35Q96QK1 SNORD56.4-201ENST00000363883 71 ntBASIC3.9□□□□□ -1.79
VPS35Q96QK1 ARV1-202ENST00000366658 1170 ntTSL 5 BASIC3.9□□□□□ -1.79
VPS35Q96QK1 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
VPS35Q96QK1 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC3.9□□□□□ -1.79
VPS35Q96QK1 RNU6-213P-201ENST00000384051 104 ntBASIC3.9□□□□□ -1.79
VPS35Q96QK1 ZNF736P2Y-201ENST00000416040 1279 ntBASIC3.9□□□□□ -1.79
VPS35Q96QK1 AC114814.2-201ENST00000419195 485 ntBASIC3.9□□□□□ -1.79
VPS35Q96QK1 AL159169.1-201ENST00000421119 127 ntBASIC3.9□□□□□ -1.79
VPS35Q96QK1 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
VPS35Q96QK1 AC008065.1-201ENST00000428525 348 ntBASIC3.9□□□□□ -1.79
VPS35Q96QK1 FTH1P6-201ENST00000430768 320 ntBASIC3.9□□□□□ -1.79
VPS35Q96QK1 AL365396.1-201ENST00000430854 671 ntBASIC3.9□□□□□ -1.79
VPS35Q96QK1 AC011742.1-201ENST00000431448 434 ntBASIC3.9□□□□□ -1.79
VPS35Q96QK1 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC3.9□□□□□ -1.79
VPS35Q96QK1 TPTE2P3-201ENST00000441562 1189 ntBASIC3.9□□□□□ -1.79
VPS35Q96QK1 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC3.9□□□□□ -1.79
VPS35Q96QK1 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC3.9□□□□□ -1.79
VPS35Q96QK1 SNRPGP5-201ENST00000456003 220 ntBASIC3.9□□□□□ -1.79
VPS35Q96QK1 RPL21P11-201ENST00000461458 483 ntBASIC3.9□□□□□ -1.79
VPS35Q96QK1 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC3.9□□□□□ -1.79
VPS35Q96QK1 AP000926.1-201ENST00000479573 241 ntBASIC3.9□□□□□ -1.79
VPS35Q96QK1 RPS3AP6-201ENST00000484430 795 ntBASIC3.9□□□□□ -1.79
VPS35Q96QK1 VN1R105P-201ENST00000486595 910 ntBASIC3.9□□□□□ -1.79
VPS35Q96QK1 AC005351.1-201ENST00000511152 786 ntBASIC3.9□□□□□ -1.79
VPS35Q96QK1 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC3.9□□□□□ -1.79
VPS35Q96QK1 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.79
VPS35Q96QK1 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC3.9□□□□□ -1.79
VPS35Q96QK1 LINC02404-201ENST00000546710 1188 ntTSL 5 BASIC3.9□□□□□ -1.79
VPS35Q96QK1 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC3.9□□□□□ -1.79
VPS35Q96QK1 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC3.9□□□□□ -1.79
VPS35Q96QK1 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC3.9□□□□□ -1.79
VPS35Q96QK1 ATP5F1P7-201ENST00000567330 760 ntBASIC3.9□□□□□ -1.79
VPS35Q96QK1 EIF1P6-201ENST00000600054 334 ntBASIC3.9□□□□□ -1.79
VPS35Q96QK1 AL606490.9-201ENST00000603331 271 ntBASIC3.9□□□□□ -1.79
VPS35Q96QK1 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC3.9□□□□□ -1.79
VPS35Q96QK1 AC024941.1-201ENST00000612250 334 ntBASIC3.9□□□□□ -1.79
VPS35Q96QK1 MIR6875-201ENST00000617506 72 ntBASIC3.9□□□□□ -1.79
VPS35Q96QK1 AL136964.1-201ENST00000622038 2990 ntBASIC3.9□□□□□ -1.79
VPS35Q96QK1 AL356094.1-201ENST00000624663 1212 ntBASIC3.9□□□□□ -1.79
VPS35Q96QK1 AP003400.6-201ENST00000624698 740 ntBASIC3.9□□□□□ -1.79
VPS35Q96QK1 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.9□□□□□ -1.79
VPS35Q96QK1 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.9□□□□□ -1.79
VPS35Q96QK1 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC3.89□□□□□ -1.79
VPS35Q96QK1 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC3.89□□□□□ -1.79
VPS35Q96QK1 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC3.89□□□□□ -1.79
VPS35Q96QK1 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
VPS35Q96QK1 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC3.89□□□□□ -1.79
VPS35Q96QK1 RNA5SP479-201ENST00000364858 117 ntBASIC3.89□□□□□ -1.79
VPS35Q96QK1 U3.15-201ENST00000365398 212 ntBASIC3.89□□□□□ -1.79
VPS35Q96QK1 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
VPS35Q96QK1 MIR1193-201ENST00000408109 78 ntBASIC3.89□□□□□ -1.79
VPS35Q96QK1 RN7SKP177-201ENST00000410567 355 ntBASIC3.89□□□□□ -1.79
VPS35Q96QK1 Z97055.1-201ENST00000419730 712 ntBASIC3.89□□□□□ -1.79
VPS35Q96QK1 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC3.89□□□□□ -1.79
VPS35Q96QK1 ELOCP6-201ENST00000429066 328 ntBASIC3.89□□□□□ -1.79
VPS35Q96QK1 AC074367.1-201ENST00000438685 1125 ntBASIC3.89□□□□□ -1.79
VPS35Q96QK1 ELOCP12-201ENST00000458706 328 ntBASIC3.89□□□□□ -1.79
VPS35Q96QK1 RNU7-170P-201ENST00000459303 61 ntBASIC3.89□□□□□ -1.79
VPS35Q96QK1 RPS20P21-201ENST00000466859 343 ntBASIC3.89□□□□□ -1.79
VPS35Q96QK1 RPL7L1P8-201ENST00000469911 741 ntBASIC3.89□□□□□ -1.79
VPS35Q96QK1 AC007537.2-201ENST00000472093 511 ntBASIC3.89□□□□□ -1.79
VPS35Q96QK1 AC126121.1-201ENST00000482313 553 ntBASIC3.89□□□□□ -1.79
VPS35Q96QK1 RPL21P47-201ENST00000483696 477 ntBASIC3.89□□□□□ -1.79
VPS35Q96QK1 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC3.89□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 127.3 ms