Protein–RNA interactions for Protein: Q96K76

USP47, Ubiquitin carboxyl-terminal hydrolase 47, humanhuman

Predictions only

Length 1,375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP47Q96K76 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC4.68□□□□□ -1.66
USP47Q96K76 AL355596.1-201ENST00000565399 3996 ntBASIC4.68□□□□□ -1.66
USP47Q96K76 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
USP47Q96K76 RNASE6-201ENST00000304677 1061 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
USP47Q96K76 BMS1P3-201ENST00000372011 932 ntBASIC4.68□□□□□ -1.66
USP47Q96K76 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC4.68□□□□□ -1.66
USP47Q96K76 RPL7P44-201ENST00000424827 742 ntBASIC4.68□□□□□ -1.66
USP47Q96K76 AC006994.1-201ENST00000438212 839 ntBASIC4.68□□□□□ -1.66
USP47Q96K76 Z75741.1-201ENST00000446793 314 ntBASIC4.68□□□□□ -1.66
USP47Q96K76 FGF7P3-201ENST00000454645 303 ntBASIC4.68□□□□□ -1.66
USP47Q96K76 BTF3P5-201ENST00000457252 467 ntBASIC4.68□□□□□ -1.66
USP47Q96K76 RPL23AP67-201ENST00000465341 474 ntBASIC4.68□□□□□ -1.66
USP47Q96K76 RPL7P23-201ENST00000493874 747 ntBASIC4.68□□□□□ -1.66
USP47Q96K76 LINC00632-202ENST00000498732 746 ntTSL 3 BASIC4.68□□□□□ -1.66
USP47Q96K76 AC020893.1-201ENST00000502452 580 ntBASIC4.68□□□□□ -1.66
USP47Q96K76 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC4.68□□□□□ -1.66
USP47Q96K76 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC4.68□□□□□ -1.66
USP47Q96K76 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC4.68□□□□□ -1.66
USP47Q96K76 AC018442.3-201ENST00000523025 183 ntBASIC4.68□□□□□ -1.66
USP47Q96K76 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC4.68□□□□□ -1.66
USP47Q96K76 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC4.68□□□□□ -1.66
USP47Q96K76 SNORD39.4-201ENST00000620099 78 ntBASIC4.68□□□□□ -1.66
USP47Q96K76 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
USP47Q96K76 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC4.68□□□□□ -1.66
USP47Q96K76 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
USP47Q96K76 MTCO1P22-201ENST00000604619 1360 ntBASIC4.68□□□□□ -1.66
USP47Q96K76 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
USP47Q96K76 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC4.67□□□□□ -1.66
USP47Q96K76 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
USP47Q96K76 OR13C3-201ENST00000374781 1108 ntBASIC4.67□□□□□ -1.66
USP47Q96K76 RHEBP3-201ENST00000411920 351 ntBASIC4.67□□□□□ -1.66
USP47Q96K76 OR1AA1P-201ENST00000419597 916 ntBASIC4.67□□□□□ -1.66
USP47Q96K76 AL365396.1-201ENST00000430854 671 ntBASIC4.67□□□□□ -1.66
USP47Q96K76 MTCO1P45-201ENST00000431457 267 ntBASIC4.67□□□□□ -1.66
USP47Q96K76 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC4.67□□□□□ -1.66
USP47Q96K76 RPS26P40-201ENST00000435209 294 ntBASIC4.67□□□□□ -1.66
USP47Q96K76 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC4.67□□□□□ -1.66
USP47Q96K76 RPL7P47-201ENST00000497299 556 ntBASIC4.67□□□□□ -1.66
USP47Q96K76 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC4.67□□□□□ -1.66
USP47Q96K76 AC012613.1-201ENST00000522685 387 ntTSL 2 BASIC4.67□□□□□ -1.66
USP47Q96K76 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC4.67□□□□□ -1.66
USP47Q96K76 MIR4513-201ENST00000581077 86 ntBASIC4.67□□□□□ -1.66
USP47Q96K76 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC4.67□□□□□ -1.66
USP47Q96K76 AC010615.3-201ENST00000597319 394 ntBASIC4.67□□□□□ -1.66
USP47Q96K76 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC4.67□□□□□ -1.66
USP47Q96K76 AC135507.2-201ENST00000612443 309 ntBASIC4.67□□□□□ -1.66
USP47Q96K76 AC009464.1-201ENST00000615731 469 ntBASIC4.67□□□□□ -1.66
USP47Q96K76 MIR7112-201ENST00000616126 65 ntBASIC4.67□□□□□ -1.66
USP47Q96K76 AC110801.1-201ENST00000623590 212 ntBASIC4.67□□□□□ -1.66
USP47Q96K76 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
USP47Q96K76 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
USP47Q96K76 AC017071.1-201ENST00000564407 2204 ntBASIC4.67□□□□□ -1.66
USP47Q96K76 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
USP47Q96K76 RNU6-729P-201ENST00000384399 107 ntBASIC4.66□□□□□ -1.66
USP47Q96K76 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
USP47Q96K76 AC104297.1-201ENST00000393779 870 ntBASIC4.66□□□□□ -1.66
USP47Q96K76 AL357075.1-201ENST00000404107 726 ntBASIC4.66□□□□□ -1.66
USP47Q96K76 RNU6-55P-201ENST00000411092 107 ntBASIC4.66□□□□□ -1.66
USP47Q96K76 RNU6-954P-201ENST00000411355 107 ntBASIC4.66□□□□□ -1.66
USP47Q96K76 AL356968.1-201ENST00000416622 474 ntBASIC4.66□□□□□ -1.66
USP47Q96K76 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC4.66□□□□□ -1.66
USP47Q96K76 UBE2V1P1-201ENST00000430836 445 ntBASIC4.66□□□□□ -1.66
USP47Q96K76 AL138787.1-202ENST00000437804 898 ntBASIC4.66□□□□□ -1.66
USP47Q96K76 AL591623.2-201ENST00000449978 222 ntBASIC4.66□□□□□ -1.66
USP47Q96K76 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC4.66□□□□□ -1.66
USP47Q96K76 AC107015.1-201ENST00000466902 747 ntBASIC4.66□□□□□ -1.66
USP47Q96K76 AC021678.1-201ENST00000505195 936 ntBASIC4.66□□□□□ -1.66
USP47Q96K76 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC4.66□□□□□ -1.66
USP47Q96K76 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC4.66□□□□□ -1.66
USP47Q96K76 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC4.66□□□□□ -1.66
USP47Q96K76 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC4.66□□□□□ -1.66
USP47Q96K76 LINC02446-201ENST00000544591 868 ntTSL 2 BASIC4.66□□□□□ -1.66
USP47Q96K76 TGIF1P1-201ENST00000558095 802 ntBASIC4.66□□□□□ -1.66
USP47Q96K76 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC4.66□□□□□ -1.66
USP47Q96K76 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC4.66□□□□□ -1.66
USP47Q96K76 AL034351.1-201ENST00000605288 668 ntBASIC4.66□□□□□ -1.66
USP47Q96K76 AC073657.2-201ENST00000605661 303 ntBASIC4.66□□□□□ -1.66
USP47Q96K76 RMST_8.1-201ENST00000610287 165 ntBASIC4.66□□□□□ -1.66
USP47Q96K76 AP005212.4-201ENST00000614206 710 ntBASIC4.66□□□□□ -1.66
USP47Q96K76 AC006840.1-201ENST00000623069 542 ntBASIC4.66□□□□□ -1.66
USP47Q96K76 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC4.66□□□□□ -1.66
USP47Q96K76 AC123767.1-201ENST00000519537 1439 ntTSL 5 BASIC4.66□□□□□ -1.66
USP47Q96K76 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
USP47Q96K76 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.66□□□□□ -1.66
USP47Q96K76 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
USP47Q96K76 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC4.66□□□□□ -1.66
USP47Q96K76 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
USP47Q96K76 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC4.66□□□□□ -1.66
USP47Q96K76 Z83843.1-201ENST00000604070 3685 ntBASIC4.66□□□□□ -1.66
USP47Q96K76 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC4.65□□□□□ -1.66
USP47Q96K76 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC4.65□□□□□ -1.66
USP47Q96K76 U3.26-201ENST00000391236 204 ntBASIC4.65□□□□□ -1.66
USP47Q96K76 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.66
USP47Q96K76 AC236972.1-201ENST00000433225 199 ntBASIC4.65□□□□□ -1.66
USP47Q96K76 AC010285.3-201ENST00000511668 676 ntBASIC4.65□□□□□ -1.66
USP47Q96K76 FTH1P9-201ENST00000513251 355 ntBASIC4.65□□□□□ -1.66
USP47Q96K76 APOOP4-201ENST00000513530 597 ntBASIC4.65□□□□□ -1.66
USP47Q96K76 SCARNA20.6-201ENST00000517251 106 ntBASIC4.65□□□□□ -1.66
USP47Q96K76 NPM1P52-201ENST00000518264 846 ntBASIC4.65□□□□□ -1.66
USP47Q96K76 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC4.65□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 106.7 ms