Protein–RNA interactions for Protein: Q96CF2

CHMP4C, Charged multivesicular body protein 4c, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4CQ96CF2 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC5.54□□□□□ -1.52
CHMP4CQ96CF2 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC5.54□□□□□ -1.52
CHMP4CQ96CF2 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC5.54□□□□□ -1.52
CHMP4CQ96CF2 RNU6-1261P-201ENST00000517194 104 ntBASIC5.54□□□□□ -1.52
CHMP4CQ96CF2 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC5.54□□□□□ -1.52
CHMP4CQ96CF2 IGHVIII-2-1-201ENST00000518843 291 ntBASIC5.54□□□□□ -1.52
CHMP4CQ96CF2 RAB9BP1-201ENST00000519581 626 ntBASIC5.54□□□□□ -1.52
CHMP4CQ96CF2 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC5.54□□□□□ -1.52
CHMP4CQ96CF2 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC5.54□□□□□ -1.52
CHMP4CQ96CF2 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC5.54□□□□□ -1.52
CHMP4CQ96CF2 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC5.54□□□□□ -1.52
CHMP4CQ96CF2 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC5.54□□□□□ -1.52
CHMP4CQ96CF2 AC011477.5-201ENST00000586571 259 ntBASIC5.54□□□□□ -1.52
CHMP4CQ96CF2 AL592221.1-201ENST00000605266 382 ntBASIC5.54□□□□□ -1.52
CHMP4CQ96CF2 MIR6780A-201ENST00000615089 68 ntBASIC5.54□□□□□ -1.52
CHMP4CQ96CF2 AC140113.4-201ENST00000622087 222 ntBASIC5.54□□□□□ -1.52
CHMP4CQ96CF2 OR8B1P-202ENST00000641132 1178 ntBASIC5.54□□□□□ -1.52
CHMP4CQ96CF2 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
CHMP4CQ96CF2 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CHMP4CQ96CF2 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CHMP4CQ96CF2 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CHMP4CQ96CF2 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CHMP4CQ96CF2 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC5.54□□□□□ -1.52
CHMP4CQ96CF2 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC5.54□□□□□ -1.52
CHMP4CQ96CF2 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC5.54□□□□□ -1.52
CHMP4CQ96CF2 MFSD8-216ENST00000641147 4009 ntBASIC5.53□□□□□ -1.52
CHMP4CQ96CF2 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC5.53□□□□□ -1.52
CHMP4CQ96CF2 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CHMP4CQ96CF2 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CHMP4CQ96CF2 CARF-203ENST00000414439 2099 ntTSL 2 BASIC5.53□□□□□ -1.52
CHMP4CQ96CF2 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CHMP4CQ96CF2 RNU5A-2P-201ENST00000384337 116 ntBASIC5.53□□□□□ -1.52
CHMP4CQ96CF2 U3.22-201ENST00000391120 215 ntBASIC5.53□□□□□ -1.52
CHMP4CQ96CF2 RSL24D1P4-201ENST00000400938 484 ntBASIC5.53□□□□□ -1.52
CHMP4CQ96CF2 AL591848.1-201ENST00000413092 322 ntBASIC5.53□□□□□ -1.52
CHMP4CQ96CF2 LUZP4P1-201ENST00000415420 344 ntBASIC5.53□□□□□ -1.52
CHMP4CQ96CF2 AC234781.2-201ENST00000426370 994 ntBASIC5.53□□□□□ -1.52
CHMP4CQ96CF2 AL365396.1-201ENST00000430854 671 ntBASIC5.53□□□□□ -1.52
CHMP4CQ96CF2 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC5.53□□□□□ -1.52
CHMP4CQ96CF2 MTND5P2-201ENST00000442927 1142 ntBASIC5.53□□□□□ -1.52
CHMP4CQ96CF2 GEMIN8P3-201ENST00000445417 720 ntBASIC5.53□□□□□ -1.52
CHMP4CQ96CF2 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC5.53□□□□□ -1.52
CHMP4CQ96CF2 LINC00888-204ENST00000487386 421 ntBASIC5.53□□□□□ -1.52
CHMP4CQ96CF2 ARL4AP1-201ENST00000503220 705 ntBASIC5.53□□□□□ -1.52
CHMP4CQ96CF2 AC010486.3-201ENST00000511602 785 ntBASIC5.53□□□□□ -1.52
CHMP4CQ96CF2 AC110760.1-201ENST00000513770 590 ntTSL 3 BASIC5.53□□□□□ -1.52
CHMP4CQ96CF2 MTCO1P47-201ENST00000523889 1271 ntBASIC5.53□□□□□ -1.52
CHMP4CQ96CF2 CARD16-203ENST00000525374 503 ntTSL 3 BASIC5.53□□□□□ -1.52
CHMP4CQ96CF2 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC5.53□□□□□ -1.52
CHMP4CQ96CF2 AC022882.1-201ENST00000532142 501 ntBASIC5.53□□□□□ -1.52
CHMP4CQ96CF2 AC107918.3-201ENST00000533272 382 ntBASIC5.53□□□□□ -1.52
CHMP4CQ96CF2 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC5.53□□□□□ -1.52
CHMP4CQ96CF2 RPL21P7-201ENST00000557463 483 ntBASIC5.53□□□□□ -1.52
CHMP4CQ96CF2 AC021351.1-201ENST00000560886 652 ntTSL 5 BASIC5.53□□□□□ -1.52
CHMP4CQ96CF2 ATP5J2P6-201ENST00000565203 266 ntBASIC5.53□□□□□ -1.52
CHMP4CQ96CF2 MIR4716-201ENST00000579628 84 ntBASIC5.53□□□□□ -1.52
CHMP4CQ96CF2 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC5.53□□□□□ -1.52
CHMP4CQ96CF2 MIR6810-201ENST00000622701 70 ntBASIC5.53□□□□□ -1.52
CHMP4CQ96CF2 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CHMP4CQ96CF2 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC5.53□□□□□ -1.52
CHMP4CQ96CF2 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
CHMP4CQ96CF2 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CHMP4CQ96CF2 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC5.53□□□□□ -1.52
CHMP4CQ96CF2 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
CHMP4CQ96CF2 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
CHMP4CQ96CF2 MFSD8-242ENST00000641690 4199 ntBASIC5.52□□□□□ -1.53
CHMP4CQ96CF2 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
CHMP4CQ96CF2 SALL4P2-201ENST00000423288 2910 ntBASIC5.52□□□□□ -1.53
CHMP4CQ96CF2 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC5.52□□□□□ -1.53
CHMP4CQ96CF2 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
CHMP4CQ96CF2 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC5.52□□□□□ -1.53
CHMP4CQ96CF2 ST7-212ENST00000422922 1887 ntTSL 5 BASIC5.52□□□□□ -1.53
CHMP4CQ96CF2 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
CHMP4CQ96CF2 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC5.52□□□□□ -1.53
CHMP4CQ96CF2 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
CHMP4CQ96CF2 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
CHMP4CQ96CF2 RNU1-32P-201ENST00000363937 159 ntBASIC5.52□□□□□ -1.53
CHMP4CQ96CF2 RNU6-621P-201ENST00000364752 109 ntBASIC5.52□□□□□ -1.53
CHMP4CQ96CF2 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC5.52□□□□□ -1.53
CHMP4CQ96CF2 RPEP3-201ENST00000425462 676 ntBASIC5.52□□□□□ -1.53
CHMP4CQ96CF2 AC068287.1-201ENST00000430283 295 ntBASIC5.52□□□□□ -1.53
CHMP4CQ96CF2 AC005345.1-201ENST00000431868 217 ntBASIC5.52□□□□□ -1.53
CHMP4CQ96CF2 B3GNT2P1-201ENST00000434960 952 ntBASIC5.52□□□□□ -1.53
CHMP4CQ96CF2 AC016831.4-201ENST00000438302 307 ntBASIC5.52□□□□□ -1.53
CHMP4CQ96CF2 TDGF1P1-201ENST00000445734 527 ntBASIC5.52□□□□□ -1.53
CHMP4CQ96CF2 AC108463.1-201ENST00000450258 347 ntBASIC5.52□□□□□ -1.53
CHMP4CQ96CF2 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC5.52□□□□□ -1.53
CHMP4CQ96CF2 ANK3-207ENST00000460468 677 ntTSL 3 BASIC5.52□□□□□ -1.53
CHMP4CQ96CF2 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC5.52□□□□□ -1.53
CHMP4CQ96CF2 BET1P1-201ENST00000482276 359 ntBASIC5.52□□□□□ -1.53
CHMP4CQ96CF2 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
CHMP4CQ96CF2 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC5.52□□□□□ -1.53
CHMP4CQ96CF2 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
CHMP4CQ96CF2 RN7SKP92-201ENST00000517266 244 ntBASIC5.52□□□□□ -1.53
CHMP4CQ96CF2 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC5.52□□□□□ -1.53
CHMP4CQ96CF2 CYCSP28-201ENST00000534284 321 ntBASIC5.52□□□□□ -1.53
CHMP4CQ96CF2 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC5.52□□□□□ -1.53
CHMP4CQ96CF2 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC5.52□□□□□ -1.53
CHMP4CQ96CF2 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC5.52□□□□□ -1.53
CHMP4CQ96CF2 TRAV15-201ENST00000556680 249 ntBASIC5.52□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 79.4 ms