Protein–RNA interactions for Protein: Q8WYN0

ATG4A, Cysteine protease ATG4A, humanhuman

Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4AQ8WYN0 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
ATG4AQ8WYN0 RN7SKP213-201ENST00000410746 298 ntBASIC4.79□□□□□ -1.64
ATG4AQ8WYN0 AL663109.1-201ENST00000411498 844 ntBASIC4.79□□□□□ -1.64
ATG4AQ8WYN0 DPPA2P3-201ENST00000411853 655 ntBASIC4.79□□□□□ -1.64
ATG4AQ8WYN0 USP9YP33-201ENST00000412220 421 ntBASIC4.79□□□□□ -1.64
ATG4AQ8WYN0 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC4.79□□□□□ -1.64
ATG4AQ8WYN0 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
ATG4AQ8WYN0 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC4.79□□□□□ -1.64
ATG4AQ8WYN0 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC4.79□□□□□ -1.64
ATG4AQ8WYN0 PRELID3BP10-201ENST00000431957 584 ntBASIC4.79□□□□□ -1.64
ATG4AQ8WYN0 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC4.79□□□□□ -1.64
ATG4AQ8WYN0 RPS26P40-201ENST00000435209 294 ntBASIC4.79□□□□□ -1.64
ATG4AQ8WYN0 USP9YP35-201ENST00000435696 412 ntBASIC4.79□□□□□ -1.64
ATG4AQ8WYN0 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC4.79□□□□□ -1.64
ATG4AQ8WYN0 RPS24P1-201ENST00000438550 371 ntBASIC4.79□□□□□ -1.64
ATG4AQ8WYN0 ACTR3P2-201ENST00000439585 1257 ntBASIC4.79□□□□□ -1.64
ATG4AQ8WYN0 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC4.79□□□□□ -1.64
ATG4AQ8WYN0 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC4.79□□□□□ -1.64
ATG4AQ8WYN0 RAB11AP1-201ENST00000442978 646 ntBASIC4.79□□□□□ -1.64
ATG4AQ8WYN0 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC4.79□□□□□ -1.64
ATG4AQ8WYN0 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
ATG4AQ8WYN0 AC005008.1-201ENST00000456151 612 ntBASIC4.79□□□□□ -1.64
ATG4AQ8WYN0 UBA52P3-201ENST00000491303 382 ntBASIC4.79□□□□□ -1.64
ATG4AQ8WYN0 AC006499.5-201ENST00000505037 514 ntBASIC4.79□□□□□ -1.64
ATG4AQ8WYN0 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC4.79□□□□□ -1.64
ATG4AQ8WYN0 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC4.79□□□□□ -1.64
ATG4AQ8WYN0 AC025674.1-201ENST00000507074 324 ntBASIC4.79□□□□□ -1.64
ATG4AQ8WYN0 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC4.79□□□□□ -1.64
ATG4AQ8WYN0 RPL7L1P13-201ENST00000511702 739 ntBASIC4.79□□□□□ -1.64
ATG4AQ8WYN0 SNORA48.10-201ENST00000516965 160 ntBASIC4.79□□□□□ -1.64
ATG4AQ8WYN0 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC4.79□□□□□ -1.64
ATG4AQ8WYN0 IGLV2-28-201ENST00000520681 304 ntBASIC4.79□□□□□ -1.64
ATG4AQ8WYN0 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC4.79□□□□□ -1.64
ATG4AQ8WYN0 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
ATG4AQ8WYN0 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC4.79□□□□□ -1.64
ATG4AQ8WYN0 AP002963.1-201ENST00000530590 184 ntBASIC4.79□□□□□ -1.64
ATG4AQ8WYN0 OR10G5P-201ENST00000532733 358 ntBASIC4.79□□□□□ -1.64
ATG4AQ8WYN0 AP001880.2-201ENST00000538233 448 ntBASIC4.79□□□□□ -1.64
ATG4AQ8WYN0 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC4.79□□□□□ -1.64
ATG4AQ8WYN0 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC4.79□□□□□ -1.64
ATG4AQ8WYN0 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC4.79□□□□□ -1.64
ATG4AQ8WYN0 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC4.79□□□□□ -1.64
ATG4AQ8WYN0 AC068714.1-201ENST00000559623 800 ntBASIC4.79□□□□□ -1.64
ATG4AQ8WYN0 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC4.79□□□□□ -1.64
ATG4AQ8WYN0 AC016180.1-201ENST00000567945 403 ntBASIC4.79□□□□□ -1.64
ATG4AQ8WYN0 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC4.79□□□□□ -1.64
ATG4AQ8WYN0 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC4.79□□□□□ -1.64
ATG4AQ8WYN0 AC020914.6-201ENST00000594327 272 ntBASIC4.79□□□□□ -1.64
ATG4AQ8WYN0 AC087763.1-201ENST00000603391 286 ntBASIC4.79□□□□□ -1.64
ATG4AQ8WYN0 AL445222.1-201ENST00000607259 628 ntBASIC4.79□□□□□ -1.64
ATG4AQ8WYN0 AC091979.2-201ENST00000607514 214 ntBASIC4.79□□□□□ -1.64
ATG4AQ8WYN0 DLEU2_1.1-201ENST00000612089 120 ntBASIC4.79□□□□□ -1.64
ATG4AQ8WYN0 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC4.79□□□□□ -1.64
ATG4AQ8WYN0 DLEU2_1.2-201ENST00000614667 120 ntBASIC4.79□□□□□ -1.64
ATG4AQ8WYN0 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
ATG4AQ8WYN0 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
ATG4AQ8WYN0 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC4.79□□□□□ -1.64
ATG4AQ8WYN0 AC009509.4-201ENST00000619202 509 ntBASIC4.79□□□□□ -1.64
ATG4AQ8WYN0 AC092650.2-201ENST00000619984 902 ntBASIC4.79□□□□□ -1.64
ATG4AQ8WYN0 AC120349.2-201ENST00000625002 298 ntBASIC4.79□□□□□ -1.64
ATG4AQ8WYN0 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
ATG4AQ8WYN0 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
ATG4AQ8WYN0 AC007342.5-201ENST00000571340 2142 ntBASIC4.79□□□□□ -1.64
ATG4AQ8WYN0 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
ATG4AQ8WYN0 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
ATG4AQ8WYN0 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
ATG4AQ8WYN0 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
ATG4AQ8WYN0 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
ATG4AQ8WYN0 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC4.78□□□□□ -1.64
ATG4AQ8WYN0 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
ATG4AQ8WYN0 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
ATG4AQ8WYN0 NEAT1-202ENST00000501122 22743 ntBASIC4.78□□□□□ -1.64
ATG4AQ8WYN0 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.78□□□□□ -1.64
ATG4AQ8WYN0 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.78□□□□□ -1.64
ATG4AQ8WYN0 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC4.78□□□□□ -1.64
ATG4AQ8WYN0 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
ATG4AQ8WYN0 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
ATG4AQ8WYN0 AL121657.1-201ENST00000327215 531 ntBASIC4.78□□□□□ -1.64
ATG4AQ8WYN0 Y_RNA.25-201ENST00000362528 102 ntBASIC4.78□□□□□ -1.64
ATG4AQ8WYN0 RPL23AP29-201ENST00000397284 453 ntBASIC4.78□□□□□ -1.64
ATG4AQ8WYN0 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC4.78□□□□□ -1.64
ATG4AQ8WYN0 AC079760.2-203ENST00000418395 489 ntTSL 3 BASIC4.78□□□□□ -1.64
ATG4AQ8WYN0 MTCO3P1-205ENST00000422088 832 ntBASIC4.78□□□□□ -1.64
ATG4AQ8WYN0 AC004448.2-201ENST00000422360 586 ntBASIC4.78□□□□□ -1.64
ATG4AQ8WYN0 OR5BE1P-201ENST00000425977 939 ntBASIC4.78□□□□□ -1.64
ATG4AQ8WYN0 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC4.78□□□□□ -1.64
ATG4AQ8WYN0 RPL21P91-201ENST00000429231 479 ntBASIC4.78□□□□□ -1.64
ATG4AQ8WYN0 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC4.78□□□□□ -1.64
ATG4AQ8WYN0 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC4.78□□□□□ -1.64
ATG4AQ8WYN0 TRIM60P18-201ENST00000441518 828 ntBASIC4.78□□□□□ -1.64
ATG4AQ8WYN0 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC4.78□□□□□ -1.64
ATG4AQ8WYN0 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC4.78□□□□□ -1.64
ATG4AQ8WYN0 NDUFA5P7-201ENST00000452914 242 ntBASIC4.78□□□□□ -1.64
ATG4AQ8WYN0 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC4.78□□□□□ -1.64
ATG4AQ8WYN0 RN7SL591P-201ENST00000496150 292 ntBASIC4.78□□□□□ -1.64
ATG4AQ8WYN0 HMGB1P28-201ENST00000507778 552 ntBASIC4.78□□□□□ -1.64
ATG4AQ8WYN0 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC4.78□□□□□ -1.64
ATG4AQ8WYN0 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC4.78□□□□□ -1.64
ATG4AQ8WYN0 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC4.78□□□□□ -1.64
ATG4AQ8WYN0 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC4.78□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 96.2 ms