Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 NMD3P1-201ENST00000439704 1488 ntBASIC3.49□□□□□ -1.85
SHROOM3Q8TF72 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
SHROOM3Q8TF72 RNU6-249P-201ENST00000363016 102 ntBASIC3.49□□□□□ -1.85
SHROOM3Q8TF72 RN7SKP111-201ENST00000410349 271 ntBASIC3.49□□□□□ -1.85
SHROOM3Q8TF72 RPS12P5-201ENST00000423449 371 ntBASIC3.49□□□□□ -1.85
SHROOM3Q8TF72 RPS26P40-201ENST00000435209 294 ntBASIC3.49□□□□□ -1.85
SHROOM3Q8TF72 SEPT7P3-201ENST00000455017 621 ntBASIC3.49□□□□□ -1.85
SHROOM3Q8TF72 AC112198.1-201ENST00000505369 1220 ntBASIC3.49□□□□□ -1.85
SHROOM3Q8TF72 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC3.49□□□□□ -1.85
SHROOM3Q8TF72 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.49□□□□□ -1.85
SHROOM3Q8TF72 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC3.49□□□□□ -1.85
SHROOM3Q8TF72 AC011611.1-201ENST00000552179 197 ntBASIC3.49□□□□□ -1.85
SHROOM3Q8TF72 MIR4769-201ENST00000584126 77 ntBASIC3.49□□□□□ -1.85
SHROOM3Q8TF72 DAOA-AS1_1.1-201ENST00000613021 201 ntBASIC3.49□□□□□ -1.85
SHROOM3Q8TF72 AL162274.2-201ENST00000614406 332 ntBASIC3.49□□□□□ -1.85
SHROOM3Q8TF72 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC3.49□□□□□ -1.85
SHROOM3Q8TF72 AL353743.1-202ENST00000431724 1695 ntBASIC3.48□□□□□ -1.85
SHROOM3Q8TF72 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC3.48□□□□□ -1.85
SHROOM3Q8TF72 AC012020.1-201ENST00000624541 1728 ntBASIC3.48□□□□□ -1.85
SHROOM3Q8TF72 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC3.48□□□□□ -1.85
SHROOM3Q8TF72 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.48□□□□□ -1.85
SHROOM3Q8TF72 AL132656.3-201ENST00000606384 1595 ntBASIC3.48□□□□□ -1.85
SHROOM3Q8TF72 IL36B-201ENST00000259213 1186 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
SHROOM3Q8TF72 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC3.48□□□□□ -1.85
SHROOM3Q8TF72 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC3.48□□□□□ -1.85
SHROOM3Q8TF72 ARF4P3-201ENST00000397387 509 ntBASIC3.48□□□□□ -1.85
SHROOM3Q8TF72 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC3.48□□□□□ -1.85
SHROOM3Q8TF72 OSTCP5-201ENST00000425293 453 ntBASIC3.48□□□□□ -1.85
SHROOM3Q8TF72 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC3.48□□□□□ -1.85
SHROOM3Q8TF72 AL365396.1-201ENST00000430854 671 ntBASIC3.48□□□□□ -1.85
SHROOM3Q8TF72 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC3.48□□□□□ -1.85
SHROOM3Q8TF72 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.48□□□□□ -1.85
SHROOM3Q8TF72 RPL7P38-201ENST00000488396 739 ntBASIC3.48□□□□□ -1.85
SHROOM3Q8TF72 AC096576.1-201ENST00000489014 359 ntBASIC3.48□□□□□ -1.85
SHROOM3Q8TF72 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
SHROOM3Q8TF72 FCF1P8-201ENST00000510322 597 ntBASIC3.48□□□□□ -1.85
SHROOM3Q8TF72 MIR4738-201ENST00000579134 87 ntBASIC3.48□□□□□ -1.85
SHROOM3Q8TF72 MIR4425-201ENST00000580572 84 ntBASIC3.48□□□□□ -1.85
SHROOM3Q8TF72 MIR4276-201ENST00000584832 70 ntBASIC3.48□□□□□ -1.85
SHROOM3Q8TF72 AC092111.2-201ENST00000611627 1414 ntBASIC3.48□□□□□ -1.85
SHROOM3Q8TF72 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
SHROOM3Q8TF72 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.48□□□□□ -1.85
SHROOM3Q8TF72 AC116096.1-201ENST00000566804 2314 ntBASIC3.48□□□□□ -1.85
SHROOM3Q8TF72 GJA9-202ENST00000360786 1901 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
SHROOM3Q8TF72 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC3.48□□□□□ -1.85
SHROOM3Q8TF72 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC3.47□□□□□ -1.85
SHROOM3Q8TF72 RNU6-55P-201ENST00000411092 107 ntBASIC3.47□□□□□ -1.85
SHROOM3Q8TF72 RNU6-954P-201ENST00000411355 107 ntBASIC3.47□□□□□ -1.85
SHROOM3Q8TF72 FAR1P1-201ENST00000427163 934 ntBASIC3.47□□□□□ -1.85
SHROOM3Q8TF72 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC3.47□□□□□ -1.85
SHROOM3Q8TF72 MTCO3P17-201ENST00000443775 513 ntBASIC3.47□□□□□ -1.85
SHROOM3Q8TF72 NANOGNBP1-201ENST00000448444 480 ntBASIC3.47□□□□□ -1.85
SHROOM3Q8TF72 U3.44-201ENST00000458938 192 ntBASIC3.47□□□□□ -1.85
SHROOM3Q8TF72 RPL7P47-201ENST00000497299 556 ntBASIC3.47□□□□□ -1.85
SHROOM3Q8TF72 AC100801.1-201ENST00000517368 517 ntTSL 3 BASIC3.47□□□□□ -1.85
SHROOM3Q8TF72 AC016993.1-201ENST00000547033 1258 ntTSL 3 BASIC3.47□□□□□ -1.85
SHROOM3Q8TF72 AC107032.2-201ENST00000551082 386 ntTSL 3 BASIC3.47□□□□□ -1.85
SHROOM3Q8TF72 AL121594.4-201ENST00000556211 1196 ntBASIC3.47□□□□□ -1.85
SHROOM3Q8TF72 AC079328.3-201ENST00000558905 691 ntTSL 3 BASIC3.47□□□□□ -1.85
SHROOM3Q8TF72 AC034105.3-201ENST00000565294 442 ntBASIC3.47□□□□□ -1.85
SHROOM3Q8TF72 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC3.47□□□□□ -1.85
SHROOM3Q8TF72 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.47□□□□□ -1.85
SHROOM3Q8TF72 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.47□□□□□ -1.85
SHROOM3Q8TF72 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
SHROOM3Q8TF72 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC3.47□□□□□ -1.85
SHROOM3Q8TF72 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
SHROOM3Q8TF72 SRP72P2-201ENST00000344851 1979 ntBASIC3.47□□□□□ -1.85
SHROOM3Q8TF72 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.47□□□□□ -1.85
SHROOM3Q8TF72 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
SHROOM3Q8TF72 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC3.47□□□□□ -1.85
SHROOM3Q8TF72 SAMD13-204ENST00000370671 724 ntTSL 3 BASIC3.47□□□□□ -1.85
SHROOM3Q8TF72 TXN-201ENST00000374515 635 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
SHROOM3Q8TF72 AC244033.1-201ENST00000426826 870 ntBASIC3.47□□□□□ -1.85
SHROOM3Q8TF72 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC3.47□□□□□ -1.85
SHROOM3Q8TF72 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC3.47□□□□□ -1.85
SHROOM3Q8TF72 AC239809.1-201ENST00000450470 217 ntBASIC3.47□□□□□ -1.85
SHROOM3Q8TF72 DNAJC19P1-201ENST00000455312 319 ntBASIC3.47□□□□□ -1.85
SHROOM3Q8TF72 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC3.47□□□□□ -1.85
SHROOM3Q8TF72 Y_RNA.638-201ENST00000459374 113 ntBASIC3.47□□□□□ -1.85
SHROOM3Q8TF72 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC3.47□□□□□ -1.85
SHROOM3Q8TF72 RPL7L1P13-201ENST00000511702 739 ntBASIC3.47□□□□□ -1.85
SHROOM3Q8TF72 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC3.47□□□□□ -1.85
SHROOM3Q8TF72 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC3.47□□□□□ -1.85
SHROOM3Q8TF72 DNAJC10-209ENST00000613960 1010 ntTSL 5 BASIC3.47□□□□□ -1.85
SHROOM3Q8TF72 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
SHROOM3Q8TF72 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.47□□□□□ -1.85
SHROOM3Q8TF72 AC099811.1-201ENST00000597755 1496 ntTSL 3 BASIC3.47□□□□□ -1.85
SHROOM3Q8TF72 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
SHROOM3Q8TF72 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.85
SHROOM3Q8TF72 DST-220ENST00000518935 3547 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
SHROOM3Q8TF72 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
SHROOM3Q8TF72 MIR1183-201ENST00000408856 89 ntBASIC3.46□□□□□ -1.86
SHROOM3Q8TF72 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
SHROOM3Q8TF72 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
SHROOM3Q8TF72 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC3.46□□□□□ -1.86
SHROOM3Q8TF72 DNAJC19P8-201ENST00000452887 259 ntBASIC3.46□□□□□ -1.86
SHROOM3Q8TF72 MTCO3P20-201ENST00000454926 688 ntBASIC3.46□□□□□ -1.86
SHROOM3Q8TF72 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC3.46□□□□□ -1.86
SHROOM3Q8TF72 RNVU1-4-201ENST00000612985 164 ntBASIC3.46□□□□□ -1.86
SHROOM3Q8TF72 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC3.46□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 91.9 ms