Protein–RNA interactions for Protein: Q8NHS4

CLHC1, Clathrin heavy chain linker domain-containing protein 1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1Q8NHS4 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC3.58□□□□□ -1.84
CLHC1Q8NHS4 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.58□□□□□ -1.84
CLHC1Q8NHS4 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC3.58□□□□□ -1.84
CLHC1Q8NHS4 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC3.58□□□□□ -1.84
CLHC1Q8NHS4 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
CLHC1Q8NHS4 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
CLHC1Q8NHS4 RNU6-600P-201ENST00000362524 99 ntBASIC3.57□□□□□ -1.84
CLHC1Q8NHS4 SNORA51.2-201ENST00000364595 132 ntBASIC3.57□□□□□ -1.84
CLHC1Q8NHS4 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
CLHC1Q8NHS4 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
CLHC1Q8NHS4 RNU4-31P-201ENST00000384211 141 ntBASIC3.57□□□□□ -1.84
CLHC1Q8NHS4 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
CLHC1Q8NHS4 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC3.57□□□□□ -1.84
CLHC1Q8NHS4 MTCO1P8-201ENST00000416914 1523 ntBASIC3.57□□□□□ -1.84
CLHC1Q8NHS4 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC3.57□□□□□ -1.84
CLHC1Q8NHS4 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
CLHC1Q8NHS4 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC3.57□□□□□ -1.84
CLHC1Q8NHS4 PSMA2P3-201ENST00000429685 675 ntBASIC3.57□□□□□ -1.84
CLHC1Q8NHS4 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC3.57□□□□□ -1.84
CLHC1Q8NHS4 LINC00972-202ENST00000438065 788 ntTSL 3 BASIC3.57□□□□□ -1.84
CLHC1Q8NHS4 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC3.57□□□□□ -1.84
CLHC1Q8NHS4 AC114755.5-201ENST00000447760 831 ntBASIC3.57□□□□□ -1.84
CLHC1Q8NHS4 MORF4L1P4-201ENST00000450245 976 ntBASIC3.57□□□□□ -1.84
CLHC1Q8NHS4 MTCO3P20-201ENST00000454926 688 ntBASIC3.57□□□□□ -1.84
CLHC1Q8NHS4 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC3.57□□□□□ -1.84
CLHC1Q8NHS4 U3.44-201ENST00000458938 192 ntBASIC3.57□□□□□ -1.84
CLHC1Q8NHS4 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC3.57□□□□□ -1.84
CLHC1Q8NHS4 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.57□□□□□ -1.84
CLHC1Q8NHS4 AC135457.1-201ENST00000503553 664 ntTSL 3 BASIC3.57□□□□□ -1.84
CLHC1Q8NHS4 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC3.57□□□□□ -1.84
CLHC1Q8NHS4 MTCO3P42-201ENST00000509488 518 ntBASIC3.57□□□□□ -1.84
CLHC1Q8NHS4 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC3.57□□□□□ -1.84
CLHC1Q8NHS4 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC3.57□□□□□ -1.84
CLHC1Q8NHS4 MTCO3P39-201ENST00000514812 518 ntBASIC3.57□□□□□ -1.84
CLHC1Q8NHS4 SNORA26.10-201ENST00000516427 141 ntBASIC3.57□□□□□ -1.84
CLHC1Q8NHS4 RN7SKP277-201ENST00000516895 283 ntBASIC3.57□□□□□ -1.84
CLHC1Q8NHS4 SCARNA14-201ENST00000516903 136 ntBASIC3.57□□□□□ -1.84
CLHC1Q8NHS4 OR4V1P-201ENST00000525394 1140 ntBASIC3.57□□□□□ -1.84
CLHC1Q8NHS4 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC3.57□□□□□ -1.84
CLHC1Q8NHS4 OR5AP1P-201ENST00000529730 940 ntBASIC3.57□□□□□ -1.84
CLHC1Q8NHS4 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
CLHC1Q8NHS4 AP002812.4-201ENST00000532139 286 ntBASIC3.57□□□□□ -1.84
CLHC1Q8NHS4 PDCL2P2-201ENST00000533651 189 ntBASIC3.57□□□□□ -1.84
CLHC1Q8NHS4 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC3.57□□□□□ -1.84
CLHC1Q8NHS4 AL121576.1-201ENST00000556055 276 ntBASIC3.57□□□□□ -1.84
CLHC1Q8NHS4 AC135803.1-201ENST00000608748 565 ntBASIC3.57□□□□□ -1.84
CLHC1Q8NHS4 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC3.57□□□□□ -1.84
CLHC1Q8NHS4 FP236240.3-201ENST00000623061 327 ntBASIC3.57□□□□□ -1.84
CLHC1Q8NHS4 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC3.57□□□□□ -1.84
CLHC1Q8NHS4 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
CLHC1Q8NHS4 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC3.57□□□□□ -1.84
CLHC1Q8NHS4 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
CLHC1Q8NHS4 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.56□□□□□ -1.84
CLHC1Q8NHS4 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC3.56□□□□□ -1.84
CLHC1Q8NHS4 MGP-203ENST00000539261 1405 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
CLHC1Q8NHS4 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
CLHC1Q8NHS4 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.56□□□□□ -1.84
CLHC1Q8NHS4 AC022031.1-201ENST00000585985 2593 ntBASIC3.56□□□□□ -1.84
CLHC1Q8NHS4 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC3.56□□□□□ -1.84
CLHC1Q8NHS4 OR5M3-201ENST00000312240 1051 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
CLHC1Q8NHS4 RNA5SP283-201ENST00000365604 119 ntBASIC3.56□□□□□ -1.84
CLHC1Q8NHS4 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC3.56□□□□□ -1.84
CLHC1Q8NHS4 RNU6-452P-201ENST00000384406 107 ntBASIC3.56□□□□□ -1.84
CLHC1Q8NHS4 EI24P2-201ENST00000397776 1076 ntBASIC3.56□□□□□ -1.84
CLHC1Q8NHS4 AL355379.1-201ENST00000405542 640 ntBASIC3.56□□□□□ -1.84
CLHC1Q8NHS4 CASKP1-201ENST00000412870 582 ntBASIC3.56□□□□□ -1.84
CLHC1Q8NHS4 HMGB3P20-201ENST00000417997 600 ntBASIC3.56□□□□□ -1.84
CLHC1Q8NHS4 AL691447.1-201ENST00000419456 387 ntBASIC3.56□□□□□ -1.84
CLHC1Q8NHS4 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC3.56□□□□□ -1.84
CLHC1Q8NHS4 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC3.56□□□□□ -1.84
CLHC1Q8NHS4 AL121584.1-201ENST00000453972 519 ntTSL 3 BASIC3.56□□□□□ -1.84
CLHC1Q8NHS4 RN7SL323P-201ENST00000494712 295 ntBASIC3.56□□□□□ -1.84
CLHC1Q8NHS4 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC3.56□□□□□ -1.84
CLHC1Q8NHS4 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC3.56□□□□□ -1.84
CLHC1Q8NHS4 AC108064.1-201ENST00000513791 460 ntBASIC3.56□□□□□ -1.84
CLHC1Q8NHS4 MTCO1P35-201ENST00000515270 228 ntBASIC3.56□□□□□ -1.84
CLHC1Q8NHS4 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC3.56□□□□□ -1.84
CLHC1Q8NHS4 SYF2P1-201ENST00000550658 413 ntBASIC3.56□□□□□ -1.84
CLHC1Q8NHS4 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC3.56□□□□□ -1.84
CLHC1Q8NHS4 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC3.56□□□□□ -1.84
CLHC1Q8NHS4 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC3.56□□□□□ -1.84
CLHC1Q8NHS4 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC3.56□□□□□ -1.84
CLHC1Q8NHS4 AC015727.1-201ENST00000572792 512 ntTSL 5 BASIC3.56□□□□□ -1.84
CLHC1Q8NHS4 AC090616.5-202ENST00000582111 297 ntBASIC3.56□□□□□ -1.84
CLHC1Q8NHS4 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC3.56□□□□□ -1.84
CLHC1Q8NHS4 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC3.56□□□□□ -1.84
CLHC1Q8NHS4 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.56□□□□□ -1.84
CLHC1Q8NHS4 AC092628.2-201ENST00000622492 339 ntBASIC3.56□□□□□ -1.84
CLHC1Q8NHS4 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC3.56□□□□□ -1.84
CLHC1Q8NHS4 FAM157B-203ENST00000639350 358 ntBASIC3.56□□□□□ -1.84
CLHC1Q8NHS4 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
CLHC1Q8NHS4 AC026951.1-201ENST00000559530 2459 ntBASIC3.56□□□□□ -1.84
CLHC1Q8NHS4 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.56□□□□□ -1.84
CLHC1Q8NHS4 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
CLHC1Q8NHS4 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.56□□□□□ -1.84
CLHC1Q8NHS4 AC005183.1-201ENST00000603687 1979 ntBASIC3.56□□□□□ -1.84
CLHC1Q8NHS4 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
CLHC1Q8NHS4 MTCO1P24-201ENST00000515438 1558 ntBASIC3.55□□□□□ -1.84
CLHC1Q8NHS4 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
CLHC1Q8NHS4 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC3.55□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 121 ms