Protein–RNA interactions for Protein: Q8NF91

SYNE1, Nesprin-1, humanhuman

Known RBP Predictions only

Length 8,797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1Q8NF91 MTND4P22-201ENST00000413116 1169 ntBASIC1.06□□□□□ -2.24
SYNE1Q8NF91 BMS1P22-201ENST00000414726 313 ntBASIC1.06□□□□□ -2.24
SYNE1Q8NF91 AC009963.1-201ENST00000417265 157 ntBASIC1.06□□□□□ -2.24
SYNE1Q8NF91 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC1.06□□□□□ -2.24
SYNE1Q8NF91 CCRL1P1-201ENST00000449542 1053 ntBASIC1.06□□□□□ -2.24
SYNE1Q8NF91 AC073522.1-201ENST00000483312 377 ntBASIC1.06□□□□□ -2.24
SYNE1Q8NF91 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC1.06□□□□□ -2.24
SYNE1Q8NF91 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC1.06□□□□□ -2.24
SYNE1Q8NF91 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC1.06□□□□□ -2.24
SYNE1Q8NF91 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC1.06□□□□□ -2.24
SYNE1Q8NF91 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC1.06□□□□□ -2.24
SYNE1Q8NF91 CFL2-206ENST00000556161 546 ntTSL 4 BASIC1.06□□□□□ -2.24
SYNE1Q8NF91 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC1.06□□□□□ -2.24
SYNE1Q8NF91 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC1.06□□□□□ -2.24
SYNE1Q8NF91 AC007998.5-201ENST00000622938 237 ntBASIC1.06□□□□□ -2.24
SYNE1Q8NF91 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC1.06□□□□□ -2.24
SYNE1Q8NF91 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC1.06□□□□□ -2.24
SYNE1Q8NF91 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC1.06□□□□□ -2.24
SYNE1Q8NF91 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC1.06□□□□□ -2.24
SYNE1Q8NF91 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC1.06□□□□□ -2.24
SYNE1Q8NF91 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC1.06□□□□□ -2.24
SYNE1Q8NF91 HMGN1P24-201ENST00000412282 298 ntBASIC1.06□□□□□ -2.24
SYNE1Q8NF91 AL139281.1-201ENST00000422120 335 ntBASIC1.06□□□□□ -2.24
SYNE1Q8NF91 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC1.06□□□□□ -2.24
SYNE1Q8NF91 AC010095.1-201ENST00000443543 144 ntBASIC1.06□□□□□ -2.24
SYNE1Q8NF91 AC239809.1-201ENST00000450470 217 ntBASIC1.06□□□□□ -2.24
SYNE1Q8NF91 AC023141.12-201ENST00000512399 199 ntBASIC1.06□□□□□ -2.24
SYNE1Q8NF91 GS1-279B7.1-203ENST00000565520 609 ntTSL 5 BASIC1.06□□□□□ -2.24
SYNE1Q8NF91 MIR7843-201ENST00000622274 79 ntBASIC1.06□□□□□ -2.24
SYNE1Q8NF91 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC1.06□□□□□ -2.24
SYNE1Q8NF91 IPO8P1-201ENST00000455509 3109 ntBASIC1.06□□□□□ -2.24
SYNE1Q8NF91 GCNT6-201ENST00000379591 934 ntBASIC1.06□□□□□ -2.24
SYNE1Q8NF91 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC1.06□□□□□ -2.24
SYNE1Q8NF91 AC004552.1-201ENST00000419089 348 ntBASIC1.06□□□□□ -2.24
SYNE1Q8NF91 IFNNP1-201ENST00000429219 553 ntBASIC1.06□□□□□ -2.24
SYNE1Q8NF91 ELOCP8-201ENST00000439309 332 ntBASIC1.06□□□□□ -2.24
SYNE1Q8NF91 ELOCP15-201ENST00000442090 332 ntBASIC1.06□□□□□ -2.24
SYNE1Q8NF91 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC1.06□□□□□ -2.24
SYNE1Q8NF91 RPS26P3-201ENST00000470205 348 ntBASIC1.06□□□□□ -2.24
SYNE1Q8NF91 AC090543.2-201ENST00000483963 348 ntBASIC1.06□□□□□ -2.24
SYNE1Q8NF91 AC004057.1-201ENST00000485827 348 ntBASIC1.06□□□□□ -2.24
SYNE1Q8NF91 AC025445.1-201ENST00000502728 300 ntBASIC1.06□□□□□ -2.24
SYNE1Q8NF91 PRELID3BP7-201ENST00000503606 469 ntBASIC1.06□□□□□ -2.24
SYNE1Q8NF91 SUMO2P4-201ENST00000504193 276 ntBASIC1.06□□□□□ -2.24
SYNE1Q8NF91 AC087276.1-201ENST00000529659 480 ntBASIC1.06□□□□□ -2.24
SYNE1Q8NF91 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC1.06□□□□□ -2.24
SYNE1Q8NF91 AC090877.1-201ENST00000561418 344 ntBASIC1.06□□□□□ -2.24
SYNE1Q8NF91 OR7A8P-201ENST00000595427 913 ntBASIC1.06□□□□□ -2.24
SYNE1Q8NF91 AC015922.4-201ENST00000612568 690 ntBASIC1.06□□□□□ -2.24
SYNE1Q8NF91 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC1.06□□□□□ -2.24
SYNE1Q8NF91 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC1.06□□□□□ -2.24
SYNE1Q8NF91 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC1.06□□□□□ -2.24
SYNE1Q8NF91 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC1.06□□□□□ -2.24
SYNE1Q8NF91 AC093719.1-202ENST00000392735 373 ntBASIC1.06□□□□□ -2.24
SYNE1Q8NF91 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC1.06□□□□□ -2.24
SYNE1Q8NF91 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC1.06□□□□□ -2.24
SYNE1Q8NF91 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC1.06□□□□□ -2.24
SYNE1Q8NF91 AF228730.2-201ENST00000438784 848 ntBASIC1.06□□□□□ -2.24
SYNE1Q8NF91 MTND2P25-201ENST00000449028 610 ntBASIC1.06□□□□□ -2.24
SYNE1Q8NF91 RFPL1S-203ENST00000539579 330 ntBASIC1.06□□□□□ -2.24
SYNE1Q8NF91 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC1.06□□□□□ -2.24
SYNE1Q8NF91 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC1.06□□□□□ -2.24
SYNE1Q8NF91 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC1.06□□□□□ -2.24
SYNE1Q8NF91 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC1.06□□□□□ -2.24
SYNE1Q8NF91 BDP1P-201ENST00000582658 1990 ntBASIC1.06□□□□□ -2.24
SYNE1Q8NF91 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC1.06□□□□□ -2.24
SYNE1Q8NF91 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC1.05□□□□□ -2.24
SYNE1Q8NF91 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC1.05□□□□□ -2.24
SYNE1Q8NF91 AL691447.1-201ENST00000419456 387 ntBASIC1.05□□□□□ -2.24
SYNE1Q8NF91 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC1.05□□□□□ -2.24
SYNE1Q8NF91 AL133477.1-201ENST00000457472 514 ntBASIC1.05□□□□□ -2.24
SYNE1Q8NF91 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC1.05□□□□□ -2.24
SYNE1Q8NF91 AC141257.3-201ENST00000572906 215 ntBASIC1.05□□□□□ -2.24
SYNE1Q8NF91 RPL12P50-201ENST00000603116 116 ntBASIC1.05□□□□□ -2.24
SYNE1Q8NF91 AC006023.1-201ENST00000603944 259 ntBASIC1.05□□□□□ -2.24
SYNE1Q8NF91 AL163642.2-201ENST00000604722 1019 ntBASIC1.05□□□□□ -2.24
SYNE1Q8NF91 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC1.05□□□□□ -2.24
SYNE1Q8NF91 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC1.05□□□□□ -2.24
SYNE1Q8NF91 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC1.05□□□□□ -2.24
SYNE1Q8NF91 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC1.05□□□□□ -2.24
SYNE1Q8NF91 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC1.05□□□□□ -2.24
SYNE1Q8NF91 AC006011.1-201ENST00000442758 349 ntBASIC1.05□□□□□ -2.24
SYNE1Q8NF91 AC104058.1-201ENST00000448028 297 ntBASIC1.05□□□□□ -2.24
SYNE1Q8NF91 AC069499.1-201ENST00000489433 509 ntBASIC1.05□□□□□ -2.24
SYNE1Q8NF91 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC1.05□□□□□ -2.24
SYNE1Q8NF91 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC1.05□□□□□ -2.24
SYNE1Q8NF91 AC012493.2-201ENST00000595083 291 ntBASIC1.05□□□□□ -2.24
SYNE1Q8NF91 AC104763.2-201ENST00000604179 382 ntBASIC1.05□□□□□ -2.24
SYNE1Q8NF91 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC1.05□□□□□ -2.24
SYNE1Q8NF91 AC091905.1-201ENST00000624400 311 ntBASIC1.05□□□□□ -2.24
SYNE1Q8NF91 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC1.05□□□□□ -2.24
SYNE1Q8NF91 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC1.05□□□□□ -2.24
SYNE1Q8NF91 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC1.05□□□□□ -2.24
SYNE1Q8NF91 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC1.05□□□□□ -2.24
SYNE1Q8NF91 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC1.05□□□□□ -2.24
SYNE1Q8NF91 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC1.05□□□□□ -2.24
SYNE1Q8NF91 AC007899.1-201ENST00000412776 775 ntBASIC1.05□□□□□ -2.24
SYNE1Q8NF91 RPL30P2-201ENST00000414021 291 ntBASIC1.05□□□□□ -2.24
SYNE1Q8NF91 TRGV5P-201ENST00000419915 354 ntBASIC1.05□□□□□ -2.24
SYNE1Q8NF91 PPIAP17-201ENST00000438507 471 ntBASIC1.05□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 97.6 ms