Protein–RNA interactions for Protein: Q8NEF3

CCDC112, Coiled-coil domain-containing protein 112, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC112Q8NEF3 SNORA70.19-201ENST00000516717 90 ntBASIC3.89□□□□□ -1.79
CCDC112Q8NEF3 AC083923.2-202ENST00000517773 498 ntTSL 3 BASIC3.89□□□□□ -1.79
CCDC112Q8NEF3 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC3.89□□□□□ -1.79
CCDC112Q8NEF3 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
CCDC112Q8NEF3 CYCSP30-201ENST00000546447 172 ntBASIC3.89□□□□□ -1.79
CCDC112Q8NEF3 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC3.89□□□□□ -1.79
CCDC112Q8NEF3 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC3.89□□□□□ -1.79
CCDC112Q8NEF3 MIR4458-201ENST00000578872 75 ntBASIC3.89□□□□□ -1.79
CCDC112Q8NEF3 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC3.89□□□□□ -1.79
CCDC112Q8NEF3 MIR3944-201ENST00000581277 108 ntBASIC3.89□□□□□ -1.79
CCDC112Q8NEF3 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC3.89□□□□□ -1.79
CCDC112Q8NEF3 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC3.89□□□□□ -1.79
CCDC112Q8NEF3 AL096803.3-201ENST00000609032 532 ntBASIC3.89□□□□□ -1.79
CCDC112Q8NEF3 AL354798.1-201ENST00000622505 329 ntBASIC3.89□□□□□ -1.79
CCDC112Q8NEF3 BANCR-201ENST00000624238 473 ntTSL 2 BASIC3.89□□□□□ -1.79
CCDC112Q8NEF3 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC3.89□□□□□ -1.79
CCDC112Q8NEF3 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.89□□□□□ -1.79
CCDC112Q8NEF3 MTND5P27-201ENST00000428871 1720 ntBASIC3.89□□□□□ -1.79
CCDC112Q8NEF3 AC007823.1-201ENST00000569932 1566 ntBASIC3.89□□□□□ -1.79
CCDC112Q8NEF3 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
CCDC112Q8NEF3 SNORA3.3-201ENST00000408712 125 ntBASIC3.88□□□□□ -1.79
CCDC112Q8NEF3 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC3.88□□□□□ -1.79
CCDC112Q8NEF3 AC048351.1-201ENST00000420064 602 ntBASIC3.88□□□□□ -1.79
CCDC112Q8NEF3 Z99289.1-206ENST00000425503 393 ntTSL 3 BASIC3.88□□□□□ -1.79
CCDC112Q8NEF3 MTCO3P21-201ENST00000430791 643 ntBASIC3.88□□□□□ -1.79
CCDC112Q8NEF3 B3GNT2P1-201ENST00000434960 952 ntBASIC3.88□□□□□ -1.79
CCDC112Q8NEF3 VN1R96P-201ENST00000446052 858 ntBASIC3.88□□□□□ -1.79
CCDC112Q8NEF3 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC3.88□□□□□ -1.79
CCDC112Q8NEF3 AL157400.3-201ENST00000449882 1298 ntTSL 5 BASIC3.88□□□□□ -1.79
CCDC112Q8NEF3 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC3.88□□□□□ -1.79
CCDC112Q8NEF3 SEPT7P6-201ENST00000469999 1143 ntBASIC3.88□□□□□ -1.79
CCDC112Q8NEF3 AC023598.1-201ENST00000472521 361 ntBASIC3.88□□□□□ -1.79
CCDC112Q8NEF3 AC005912.1-201ENST00000495392 255 ntBASIC3.88□□□□□ -1.79
CCDC112Q8NEF3 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
CCDC112Q8NEF3 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC3.88□□□□□ -1.79
CCDC112Q8NEF3 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC3.88□□□□□ -1.79
CCDC112Q8NEF3 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC3.88□□□□□ -1.79
CCDC112Q8NEF3 RN7SKP141-201ENST00000516167 338 ntBASIC3.88□□□□□ -1.79
CCDC112Q8NEF3 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC3.88□□□□□ -1.79
CCDC112Q8NEF3 NAT2-202ENST00000520116 716 ntTSL 3 BASIC3.88□□□□□ -1.79
CCDC112Q8NEF3 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC3.88□□□□□ -1.79
CCDC112Q8NEF3 AC104027.1-201ENST00000521887 300 ntBASIC3.88□□□□□ -1.79
CCDC112Q8NEF3 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC3.88□□□□□ -1.79
CCDC112Q8NEF3 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC3.88□□□□□ -1.79
CCDC112Q8NEF3 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC3.88□□□□□ -1.79
CCDC112Q8NEF3 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC3.88□□□□□ -1.79
CCDC112Q8NEF3 AL355922.5-201ENST00000553534 351 ntTSL 3 BASIC3.88□□□□□ -1.79
CCDC112Q8NEF3 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC3.88□□□□□ -1.79
CCDC112Q8NEF3 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.88□□□□□ -1.79
CCDC112Q8NEF3 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC3.88□□□□□ -1.79
CCDC112Q8NEF3 ABI1P1-201ENST00000603375 1120 ntBASIC3.88□□□□□ -1.79
CCDC112Q8NEF3 CR392039.5-201ENST00000623201 510 ntBASIC3.88□□□□□ -1.79
CCDC112Q8NEF3 AL592494.2-201ENST00000425455 1548 ntBASIC3.88□□□□□ -1.79
CCDC112Q8NEF3 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
CCDC112Q8NEF3 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC3.88□□□□□ -1.79
CCDC112Q8NEF3 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
CCDC112Q8NEF3 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
CCDC112Q8NEF3 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
CCDC112Q8NEF3 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
CCDC112Q8NEF3 AC024560.2-201ENST00000507981 1497 ntBASIC3.87□□□□□ -1.79
CCDC112Q8NEF3 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
CCDC112Q8NEF3 CD2-201ENST00000369477 478 ntTSL 2 BASIC3.87□□□□□ -1.79
CCDC112Q8NEF3 AL034374.1-201ENST00000406329 351 ntBASIC3.87□□□□□ -1.79
CCDC112Q8NEF3 RPL23AP82-202ENST00000427528 469 ntBASIC3.87□□□□□ -1.79
CCDC112Q8NEF3 AC105402.2-201ENST00000438503 358 ntBASIC3.87□□□□□ -1.79
CCDC112Q8NEF3 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC3.87□□□□□ -1.79
CCDC112Q8NEF3 AC007967.1-201ENST00000455422 1159 ntBASIC3.87□□□□□ -1.79
CCDC112Q8NEF3 HMGN2P7-201ENST00000456186 273 ntBASIC3.87□□□□□ -1.79
CCDC112Q8NEF3 UBDP1-202ENST00000457888 382 ntBASIC3.87□□□□□ -1.79
CCDC112Q8NEF3 CENPBD1P1-201ENST00000464061 469 ntBASIC3.87□□□□□ -1.79
CCDC112Q8NEF3 RPL23AP67-201ENST00000465341 474 ntBASIC3.87□□□□□ -1.79
CCDC112Q8NEF3 AC018635.1-201ENST00000468292 1030 ntBASIC3.87□□□□□ -1.79
CCDC112Q8NEF3 SCARNA14-201ENST00000516903 136 ntBASIC3.87□□□□□ -1.79
CCDC112Q8NEF3 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC3.87□□□□□ -1.79
CCDC112Q8NEF3 C1GALT1P1-201ENST00000548895 1089 ntBASIC3.87□□□□□ -1.79
CCDC112Q8NEF3 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC3.87□□□□□ -1.79
CCDC112Q8NEF3 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC3.87□□□□□ -1.79
CCDC112Q8NEF3 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC3.87□□□□□ -1.79
CCDC112Q8NEF3 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC3.87□□□□□ -1.79
CCDC112Q8NEF3 AC097376.2-202ENST00000608345 433 ntTSL 3 BASIC3.87□□□□□ -1.79
CCDC112Q8NEF3 AC107294.3-201ENST00000609211 526 ntBASIC3.87□□□□□ -1.79
CCDC112Q8NEF3 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC3.87□□□□□ -1.79
CCDC112Q8NEF3 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC3.87□□□□□ -1.79
CCDC112Q8NEF3 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.87□□□□□ -1.79
CCDC112Q8NEF3 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.87□□□□□ -1.79
CCDC112Q8NEF3 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.87□□□□□ -1.79
CCDC112Q8NEF3 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
CCDC112Q8NEF3 MFSD8-233ENST00000641482 4860 ntBASIC3.86□□□□□ -1.79
CCDC112Q8NEF3 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.86□□□□□ -1.79
CCDC112Q8NEF3 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
CCDC112Q8NEF3 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
CCDC112Q8NEF3 MIR148B-201ENST00000362252 99 ntBASIC3.86□□□□□ -1.79
CCDC112Q8NEF3 SNORD56.3-201ENST00000363507 71 ntBASIC3.86□□□□□ -1.79
CCDC112Q8NEF3 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
CCDC112Q8NEF3 MIR449B-201ENST00000384995 97 ntBASIC3.86□□□□□ -1.79
CCDC112Q8NEF3 RNA5SP171-201ENST00000391071 115 ntBASIC3.86□□□□□ -1.79
CCDC112Q8NEF3 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.86□□□□□ -1.79
CCDC112Q8NEF3 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
CCDC112Q8NEF3 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC3.86□□□□□ -1.79
CCDC112Q8NEF3 AL358232.1-201ENST00000448030 501 ntBASIC3.86□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 97.1 ms