Protein–RNA interactions for Protein: Q8N9Z2

CCDC71L, Coiled-coil domain-containing protein 71L, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71LQ8N9Z2 ASAH1-263ENST00000637872 886 ntTSL 5 BASIC3.35□□□□□ -1.87
CCDC71LQ8N9Z2 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
CCDC71LQ8N9Z2 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC3.35□□□□□ -1.87
CCDC71LQ8N9Z2 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
CCDC71LQ8N9Z2 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC3.35□□□□□ -1.87
CCDC71LQ8N9Z2 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.35□□□□□ -1.87
CCDC71LQ8N9Z2 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.34□□□□□ -1.87
CCDC71LQ8N9Z2 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
CCDC71LQ8N9Z2 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
CCDC71LQ8N9Z2 AC116667.1-201ENST00000604855 2072 ntBASIC3.34□□□□□ -1.87
CCDC71LQ8N9Z2 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
CCDC71LQ8N9Z2 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.34□□□□□ -1.87
CCDC71LQ8N9Z2 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.34□□□□□ -1.87
CCDC71LQ8N9Z2 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC3.34□□□□□ -1.87
CCDC71LQ8N9Z2 NSRP1P1-201ENST00000444067 1693 ntBASIC3.34□□□□□ -1.87
CCDC71LQ8N9Z2 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
CCDC71LQ8N9Z2 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC3.34□□□□□ -1.87
CCDC71LQ8N9Z2 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
CCDC71LQ8N9Z2 RNU1-18P-201ENST00000363062 164 ntBASIC3.34□□□□□ -1.87
CCDC71LQ8N9Z2 U6.112-201ENST00000384129 70 ntBASIC3.34□□□□□ -1.87
CCDC71LQ8N9Z2 MIR105-2-201ENST00000385083 81 ntBASIC3.34□□□□□ -1.87
CCDC71LQ8N9Z2 MIR620-201ENST00000385232 95 ntBASIC3.34□□□□□ -1.87
CCDC71LQ8N9Z2 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
CCDC71LQ8N9Z2 RHEBP3-201ENST00000411920 351 ntBASIC3.34□□□□□ -1.87
CCDC71LQ8N9Z2 AL024507.1-201ENST00000412741 274 ntBASIC3.34□□□□□ -1.87
CCDC71LQ8N9Z2 RPL7AP73-201ENST00000413490 353 ntBASIC3.34□□□□□ -1.87
CCDC71LQ8N9Z2 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC3.34□□□□□ -1.87
CCDC71LQ8N9Z2 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC3.34□□□□□ -1.87
CCDC71LQ8N9Z2 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC3.34□□□□□ -1.87
CCDC71LQ8N9Z2 AC007394.1-201ENST00000421941 531 ntBASIC3.34□□□□□ -1.87
CCDC71LQ8N9Z2 AL354692.1-201ENST00000423044 315 ntBASIC3.34□□□□□ -1.87
CCDC71LQ8N9Z2 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
CCDC71LQ8N9Z2 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC3.34□□□□□ -1.87
CCDC71LQ8N9Z2 MTND1P33-201ENST00000446251 917 ntBASIC3.34□□□□□ -1.87
CCDC71LQ8N9Z2 AL929288.2-201ENST00000446368 407 ntBASIC3.34□□□□□ -1.87
CCDC71LQ8N9Z2 AC233982.1-201ENST00000451247 436 ntBASIC3.34□□□□□ -1.87
CCDC71LQ8N9Z2 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC3.34□□□□□ -1.87
CCDC71LQ8N9Z2 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC3.34□□□□□ -1.87
CCDC71LQ8N9Z2 AC008280.2-201ENST00000455473 307 ntBASIC3.34□□□□□ -1.87
CCDC71LQ8N9Z2 RN7SL330P-201ENST00000469709 307 ntBASIC3.34□□□□□ -1.87
CCDC71LQ8N9Z2 RPS17P11-201ENST00000474297 293 ntBASIC3.34□□□□□ -1.87
CCDC71LQ8N9Z2 AC079910.1-201ENST00000477099 749 ntTSL 3 BASIC3.34□□□□□ -1.87
CCDC71LQ8N9Z2 AC015724.1-201ENST00000478577 156 ntBASIC3.34□□□□□ -1.87
CCDC71LQ8N9Z2 AC004453.1-201ENST00000487895 408 ntBASIC3.34□□□□□ -1.87
CCDC71LQ8N9Z2 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC3.34□□□□□ -1.87
CCDC71LQ8N9Z2 AC008638.1-201ENST00000506035 866 ntBASIC3.34□□□□□ -1.87
CCDC71LQ8N9Z2 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC3.34□□□□□ -1.87
CCDC71LQ8N9Z2 AC010374.2-201ENST00000512933 535 ntBASIC3.34□□□□□ -1.87
CCDC71LQ8N9Z2 LINC02234-202ENST00000513288 705 ntTSL 5 BASIC3.34□□□□□ -1.87
CCDC71LQ8N9Z2 CARD8-211ENST00000519332 500 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
CCDC71LQ8N9Z2 AC090150.2-201ENST00000521869 815 ntTSL 3 BASIC3.34□□□□□ -1.87
CCDC71LQ8N9Z2 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC3.34□□□□□ -1.87
CCDC71LQ8N9Z2 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC3.34□□□□□ -1.87
CCDC71LQ8N9Z2 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
CCDC71LQ8N9Z2 AL133457.1-201ENST00000564251 987 ntBASIC3.34□□□□□ -1.87
CCDC71LQ8N9Z2 AC090666.1-201ENST00000578241 445 ntBASIC3.34□□□□□ -1.87
CCDC71LQ8N9Z2 OR7E18P-201ENST00000592589 702 ntBASIC3.34□□□□□ -1.87
CCDC71LQ8N9Z2 AC008687.2-201ENST00000597865 520 ntBASIC3.34□□□□□ -1.87
CCDC71LQ8N9Z2 AC006254.3-201ENST00000603353 884 ntBASIC3.34□□□□□ -1.87
CCDC71LQ8N9Z2 AC112503.1-201ENST00000608436 391 ntBASIC3.34□□□□□ -1.87
CCDC71LQ8N9Z2 AC010872.1-201ENST00000624225 675 ntBASIC3.34□□□□□ -1.87
CCDC71LQ8N9Z2 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC3.34□□□□□ -1.87
CCDC71LQ8N9Z2 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC3.34□□□□□ -1.88
CCDC71LQ8N9Z2 MTND4P8-201ENST00000514997 1362 ntBASIC3.34□□□□□ -1.88
CCDC71LQ8N9Z2 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.34□□□□□ -1.88
CCDC71LQ8N9Z2 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
CCDC71LQ8N9Z2 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
CCDC71LQ8N9Z2 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
CCDC71LQ8N9Z2 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.34□□□□□ -1.88
CCDC71LQ8N9Z2 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
CCDC71LQ8N9Z2 AL158163.1-201ENST00000603915 1649 ntBASIC3.33□□□□□ -1.88
CCDC71LQ8N9Z2 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC3.33□□□□□ -1.88
CCDC71LQ8N9Z2 ASNSP1-204ENST00000641977 1664 ntBASIC3.33□□□□□ -1.88
CCDC71LQ8N9Z2 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
CCDC71LQ8N9Z2 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
CCDC71LQ8N9Z2 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
CCDC71LQ8N9Z2 SNORA31-201ENST00000362607 130 ntBASIC3.33□□□□□ -1.88
CCDC71LQ8N9Z2 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
CCDC71LQ8N9Z2 RNU6-468P-201ENST00000384003 109 ntBASIC3.33□□□□□ -1.88
CCDC71LQ8N9Z2 HLFP1-201ENST00000402375 499 ntBASIC3.33□□□□□ -1.88
CCDC71LQ8N9Z2 HMGB3P19-201ENST00000403971 560 ntBASIC3.33□□□□□ -1.88
CCDC71LQ8N9Z2 RNU4-25P-201ENST00000410569 230 ntBASIC3.33□□□□□ -1.88
CCDC71LQ8N9Z2 RN7SKP182-201ENST00000410772 298 ntBASIC3.33□□□□□ -1.88
CCDC71LQ8N9Z2 RNU6-272P-201ENST00000411028 104 ntBASIC3.33□□□□□ -1.88
CCDC71LQ8N9Z2 TRIM60P5Y-201ENST00000413946 574 ntBASIC3.33□□□□□ -1.88
CCDC71LQ8N9Z2 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC3.33□□□□□ -1.88
CCDC71LQ8N9Z2 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC3.33□□□□□ -1.88
CCDC71LQ8N9Z2 HSFY7P-201ENST00000432672 318 ntBASIC3.33□□□□□ -1.88
CCDC71LQ8N9Z2 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC3.33□□□□□ -1.88
CCDC71LQ8N9Z2 VN1R54P-201ENST00000435210 1049 ntBASIC3.33□□□□□ -1.88
CCDC71LQ8N9Z2 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC3.33□□□□□ -1.88
CCDC71LQ8N9Z2 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC3.33□□□□□ -1.88
CCDC71LQ8N9Z2 AL627308.1-201ENST00000435693 821 ntBASIC3.33□□□□□ -1.88
CCDC71LQ8N9Z2 HSFY8P-201ENST00000437934 318 ntBASIC3.33□□□□□ -1.88
CCDC71LQ8N9Z2 FABP5P3-201ENST00000437960 408 ntBASIC3.33□□□□□ -1.88
CCDC71LQ8N9Z2 HMGB1P37-201ENST00000439613 609 ntBASIC3.33□□□□□ -1.88
CCDC71LQ8N9Z2 AC006011.1-201ENST00000442758 349 ntBASIC3.33□□□□□ -1.88
CCDC71LQ8N9Z2 RPL36AP15-201ENST00000444514 266 ntBASIC3.33□□□□□ -1.88
CCDC71LQ8N9Z2 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC3.33□□□□□ -1.88
CCDC71LQ8N9Z2 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.33□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 95.7 ms