Protein–RNA interactions for Protein: Q8N3C7

CLIP4, CAP-Gly domain-containing linker protein 4, humanhuman

Predictions only

Length 705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4Q8N3C7 Y_RNA.194-201ENST00000363985 102 ntBASIC4.23□□□□□ -1.73
CLIP4Q8N3C7 MIR16-1-201ENST00000385271 89 ntBASIC4.23□□□□□ -1.73
CLIP4Q8N3C7 TANK-203ENST00000402568 878 ntTSL 5 BASIC4.23□□□□□ -1.73
CLIP4Q8N3C7 LINC01442-201ENST00000414201 704 ntTSL 2 BASIC4.23□□□□□ -1.73
CLIP4Q8N3C7 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC4.23□□□□□ -1.73
CLIP4Q8N3C7 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC4.23□□□□□ -1.73
CLIP4Q8N3C7 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC4.23□□□□□ -1.73
CLIP4Q8N3C7 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC4.23□□□□□ -1.73
CLIP4Q8N3C7 DYNLL1P7-201ENST00000429273 258 ntBASIC4.23□□□□□ -1.73
CLIP4Q8N3C7 RPS24P8-201ENST00000431490 402 ntBASIC4.23□□□□□ -1.73
CLIP4Q8N3C7 RPL21P110-201ENST00000433345 446 ntBASIC4.23□□□□□ -1.73
CLIP4Q8N3C7 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC4.23□□□□□ -1.73
CLIP4Q8N3C7 MTND1P34-201ENST00000438556 671 ntBASIC4.23□□□□□ -1.73
CLIP4Q8N3C7 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC4.23□□□□□ -1.73
CLIP4Q8N3C7 UBE2V1P5-201ENST00000440070 405 ntBASIC4.23□□□□□ -1.73
CLIP4Q8N3C7 TAF9P1-201ENST00000445421 515 ntBASIC4.23□□□□□ -1.73
CLIP4Q8N3C7 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC4.23□□□□□ -1.73
CLIP4Q8N3C7 MTND2P19-201ENST00000449129 1012 ntBASIC4.23□□□□□ -1.73
CLIP4Q8N3C7 RFC5P1-201ENST00000454419 874 ntBASIC4.23□□□□□ -1.73
CLIP4Q8N3C7 TAF9P2-201ENST00000454958 515 ntBASIC4.23□□□□□ -1.73
CLIP4Q8N3C7 RNU6-1218P-201ENST00000458990 108 ntBASIC4.23□□□□□ -1.73
CLIP4Q8N3C7 RPL5P24-201ENST00000463742 885 ntBASIC4.23□□□□□ -1.73
CLIP4Q8N3C7 CREM-226ENST00000469949 721 ntTSL 3 BASIC4.23□□□□□ -1.73
CLIP4Q8N3C7 AL161747.1-201ENST00000480068 358 ntBASIC4.23□□□□□ -1.73
CLIP4Q8N3C7 VPS26AP1-201ENST00000483197 979 ntBASIC4.23□□□□□ -1.73
CLIP4Q8N3C7 AC092045.1-201ENST00000495716 1231 ntBASIC4.23□□□□□ -1.73
CLIP4Q8N3C7 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
CLIP4Q8N3C7 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
CLIP4Q8N3C7 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC4.23□□□□□ -1.73
CLIP4Q8N3C7 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
CLIP4Q8N3C7 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC4.23□□□□□ -1.73
CLIP4Q8N3C7 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
CLIP4Q8N3C7 MTCO3P7-201ENST00000510008 774 ntBASIC4.23□□□□□ -1.73
CLIP4Q8N3C7 PPBPP1-201ENST00000510807 373 ntBASIC4.23□□□□□ -1.73
CLIP4Q8N3C7 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
CLIP4Q8N3C7 AC087808.1-201ENST00000520501 361 ntBASIC4.23□□□□□ -1.73
CLIP4Q8N3C7 MAL2-201ENST00000522112 573 ntTSL 4 BASIC4.23□□□□□ -1.73
CLIP4Q8N3C7 AC100770.1-201ENST00000532310 322 ntBASIC4.23□□□□□ -1.73
CLIP4Q8N3C7 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC4.23□□□□□ -1.73
CLIP4Q8N3C7 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC4.23□□□□□ -1.73
CLIP4Q8N3C7 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC4.23□□□□□ -1.73
CLIP4Q8N3C7 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC4.23□□□□□ -1.73
CLIP4Q8N3C7 AL121766.1-201ENST00000547436 487 ntBASIC4.23□□□□□ -1.73
CLIP4Q8N3C7 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC4.23□□□□□ -1.73
CLIP4Q8N3C7 AL110118.1-201ENST00000553543 400 ntBASIC4.23□□□□□ -1.73
CLIP4Q8N3C7 EDDM3DP-201ENST00000554692 434 ntBASIC4.23□□□□□ -1.73
CLIP4Q8N3C7 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC4.23□□□□□ -1.73
CLIP4Q8N3C7 AC044860.2-201ENST00000561005 179 ntBASIC4.23□□□□□ -1.73
CLIP4Q8N3C7 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC4.23□□□□□ -1.73
CLIP4Q8N3C7 OR1F2P-201ENST00000570470 933 ntBASIC4.23□□□□□ -1.73
CLIP4Q8N3C7 BPTFP1-201ENST00000579209 492 ntBASIC4.23□□□□□ -1.73
CLIP4Q8N3C7 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC4.23□□□□□ -1.73
CLIP4Q8N3C7 AL031985.2-201ENST00000600955 480 ntBASIC4.23□□□□□ -1.73
CLIP4Q8N3C7 AL512782.1-201ENST00000603093 364 ntBASIC4.23□□□□□ -1.73
CLIP4Q8N3C7 AC009220.3-201ENST00000604318 586 ntBASIC4.23□□□□□ -1.73
CLIP4Q8N3C7 AL592221.1-201ENST00000605266 382 ntBASIC4.23□□□□□ -1.73
CLIP4Q8N3C7 AC008966.2-201ENST00000606157 453 ntBASIC4.23□□□□□ -1.73
CLIP4Q8N3C7 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC4.23□□□□□ -1.73
CLIP4Q8N3C7 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC4.23□□□□□ -1.73
CLIP4Q8N3C7 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC4.23□□□□□ -1.73
CLIP4Q8N3C7 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC4.23□□□□□ -1.73
CLIP4Q8N3C7 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
CLIP4Q8N3C7 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
CLIP4Q8N3C7 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CLIP4Q8N3C7 AC096656.1-201ENST00000623826 1364 ntBASIC4.23□□□□□ -1.73
CLIP4Q8N3C7 MAPK10-304ENST00000641341 3984 ntBASIC4.23□□□□□ -1.73
CLIP4Q8N3C7 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC4.23□□□□□ -1.73
CLIP4Q8N3C7 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CLIP4Q8N3C7 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
CLIP4Q8N3C7 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC4.23□□□□□ -1.73
CLIP4Q8N3C7 AL390237.1-201ENST00000404226 1415 ntBASIC4.22□□□□□ -1.73
CLIP4Q8N3C7 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CLIP4Q8N3C7 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4.22□□□□□ -1.73
CLIP4Q8N3C7 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CLIP4Q8N3C7 KARSP3-201ENST00000571212 1504 ntBASIC4.22□□□□□ -1.73
CLIP4Q8N3C7 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CLIP4Q8N3C7 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
CLIP4Q8N3C7 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CLIP4Q8N3C7 AL391994.1-201ENST00000254724 282 ntBASIC4.22□□□□□ -1.73
CLIP4Q8N3C7 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
CLIP4Q8N3C7 AL590240.1-201ENST00000334118 313 ntBASIC4.22□□□□□ -1.73
CLIP4Q8N3C7 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CLIP4Q8N3C7 SNORA68.2-201ENST00000391263 128 ntBASIC4.22□□□□□ -1.73
CLIP4Q8N3C7 AL031577.2-201ENST00000404133 280 ntBASIC4.22□□□□□ -1.73
CLIP4Q8N3C7 RPL23AP48-201ENST00000406913 488 ntBASIC4.22□□□□□ -1.73
CLIP4Q8N3C7 AL161449.1-201ENST00000414531 1199 ntBASIC4.22□□□□□ -1.73
CLIP4Q8N3C7 TRBV24OR9-2-201ENST00000416632 435 ntBASIC4.22□□□□□ -1.73
CLIP4Q8N3C7 BX510359.2-201ENST00000417920 305 ntBASIC4.22□□□□□ -1.73
CLIP4Q8N3C7 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC4.22□□□□□ -1.73
CLIP4Q8N3C7 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CLIP4Q8N3C7 IFNNP1-201ENST00000429219 553 ntBASIC4.22□□□□□ -1.73
CLIP4Q8N3C7 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CLIP4Q8N3C7 AC016831.4-201ENST00000438302 307 ntBASIC4.22□□□□□ -1.73
CLIP4Q8N3C7 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC4.22□□□□□ -1.73
CLIP4Q8N3C7 AL138878.2-201ENST00000440581 1241 ntBASIC4.22□□□□□ -1.73
CLIP4Q8N3C7 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC4.22□□□□□ -1.73
CLIP4Q8N3C7 AC104763.1-201ENST00000475274 360 ntBASIC4.22□□□□□ -1.73
CLIP4Q8N3C7 AC008638.1-201ENST00000506035 866 ntBASIC4.22□□□□□ -1.73
CLIP4Q8N3C7 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC4.22□□□□□ -1.73
CLIP4Q8N3C7 AC007016.1-201ENST00000512110 244 ntBASIC4.22□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 120.3 ms