Protein–RNA interactions for Protein: Q8N205

SYNE4, Nesprin-4, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4Q8N205 HMGB3P31-201ENST00000413333 595 ntBASIC5.46□□□□□ -1.54
SYNE4Q8N205 OR4K6P-201ENST00000416478 897 ntBASIC5.46□□□□□ -1.54
SYNE4Q8N205 AL049610.1-201ENST00000423374 372 ntBASIC5.46□□□□□ -1.54
SYNE4Q8N205 RPL21P91-201ENST00000429231 479 ntBASIC5.46□□□□□ -1.54
SYNE4Q8N205 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC5.46□□□□□ -1.54
SYNE4Q8N205 NEK4P1-201ENST00000433383 879 ntBASIC5.46□□□□□ -1.54
SYNE4Q8N205 AL353572.1-201ENST00000442490 417 ntBASIC5.46□□□□□ -1.54
SYNE4Q8N205 AC097499.1-201ENST00000444277 208 ntBASIC5.46□□□□□ -1.54
SYNE4Q8N205 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC5.46□□□□□ -1.54
SYNE4Q8N205 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
SYNE4Q8N205 AC023050.1-201ENST00000498198 304 ntBASIC5.46□□□□□ -1.54
SYNE4Q8N205 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC5.46□□□□□ -1.54
SYNE4Q8N205 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC5.46□□□□□ -1.54
SYNE4Q8N205 HMGB3P16-201ENST00000508037 287 ntBASIC5.46□□□□□ -1.54
SYNE4Q8N205 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
SYNE4Q8N205 AC108064.1-201ENST00000513791 460 ntBASIC5.46□□□□□ -1.54
SYNE4Q8N205 RNA5SP519-201ENST00000516480 119 ntBASIC5.46□□□□□ -1.54
SYNE4Q8N205 NDUFA5P2-201ENST00000519723 344 ntBASIC5.46□□□□□ -1.54
SYNE4Q8N205 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC5.46□□□□□ -1.54
SYNE4Q8N205 AC060788.1-201ENST00000521318 469 ntBASIC5.46□□□□□ -1.54
SYNE4Q8N205 AC010198.2-201ENST00000550612 259 ntBASIC5.46□□□□□ -1.54
SYNE4Q8N205 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC5.46□□□□□ -1.54
SYNE4Q8N205 HYKK-203ENST00000563233 734 ntTSL 2 BASIC5.46□□□□□ -1.54
SYNE4Q8N205 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC5.46□□□□□ -1.54
SYNE4Q8N205 AL121834.1-201ENST00000572284 509 ntBASIC5.46□□□□□ -1.54
SYNE4Q8N205 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC5.46□□□□□ -1.54
SYNE4Q8N205 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC5.46□□□□□ -1.54
SYNE4Q8N205 AC073544.2-201ENST00000601155 540 ntBASIC5.46□□□□□ -1.54
SYNE4Q8N205 IMMP1LP1-201ENST00000605170 488 ntBASIC5.46□□□□□ -1.54
SYNE4Q8N205 OR2BH1P-201ENST00000608850 864 ntBASIC5.46□□□□□ -1.54
SYNE4Q8N205 AC105227.2-201ENST00000615075 605 ntBASIC5.46□□□□□ -1.54
SYNE4Q8N205 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC5.46□□□□□ -1.54
SYNE4Q8N205 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC5.46□□□□□ -1.54
SYNE4Q8N205 FP325313.1-201ENST00000638228 703 ntBASIC5.46□□□□□ -1.54
SYNE4Q8N205 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC5.46□□□□□ -1.54
SYNE4Q8N205 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC5.46□□□□□ -1.54
SYNE4Q8N205 MTCO1P18-201ENST00000455518 1419 ntBASIC5.46□□□□□ -1.54
SYNE4Q8N205 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC5.46□□□□□ -1.54
SYNE4Q8N205 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC5.46□□□□□ -1.54
SYNE4Q8N205 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC5.46□□□□□ -1.54
SYNE4Q8N205 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
SYNE4Q8N205 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC5.45□□□□□ -1.54
SYNE4Q8N205 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
SYNE4Q8N205 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
SYNE4Q8N205 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC5.45□□□□□ -1.54
SYNE4Q8N205 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC5.45□□□□□ -1.54
SYNE4Q8N205 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
SYNE4Q8N205 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
SYNE4Q8N205 SNORA71.3-201ENST00000362582 128 ntBASIC5.45□□□□□ -1.54
SYNE4Q8N205 RNU6-1283P-201ENST00000365314 105 ntBASIC5.45□□□□□ -1.54
SYNE4Q8N205 Y_RNA.516-201ENST00000384541 124 ntBASIC5.45□□□□□ -1.54
SYNE4Q8N205 RNA5SP372-201ENST00000390836 115 ntBASIC5.45□□□□□ -1.54
SYNE4Q8N205 RAP1BP3-201ENST00000407180 549 ntBASIC5.45□□□□□ -1.54
SYNE4Q8N205 RN7SKP235-201ENST00000410662 305 ntBASIC5.45□□□□□ -1.54
SYNE4Q8N205 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC5.45□□□□□ -1.54
SYNE4Q8N205 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC5.45□□□□□ -1.54
SYNE4Q8N205 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
SYNE4Q8N205 OR2AH1P-201ENST00000425717 928 ntBASIC5.45□□□□□ -1.54
SYNE4Q8N205 AL157831.1-201ENST00000426134 473 ntBASIC5.45□□□□□ -1.54
SYNE4Q8N205 FO393419.3-201ENST00000428741 282 ntBASIC5.45□□□□□ -1.54
SYNE4Q8N205 GCA-203ENST00000429691 824 ntTSL 3 BASIC5.45□□□□□ -1.54
SYNE4Q8N205 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
SYNE4Q8N205 TCEA1P3-201ENST00000443005 880 ntBASIC5.45□□□□□ -1.54
SYNE4Q8N205 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC5.45□□□□□ -1.54
SYNE4Q8N205 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC5.45□□□□□ -1.54
SYNE4Q8N205 AC011825.1-201ENST00000484967 388 ntBASIC5.45□□□□□ -1.54
SYNE4Q8N205 LINC00888-204ENST00000487386 421 ntBASIC5.45□□□□□ -1.54
SYNE4Q8N205 RPL35P6-201ENST00000490024 372 ntBASIC5.45□□□□□ -1.54
SYNE4Q8N205 MTND4LP26-201ENST00000518144 282 ntBASIC5.45□□□□□ -1.54
SYNE4Q8N205 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC5.45□□□□□ -1.54
SYNE4Q8N205 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC5.45□□□□□ -1.54
SYNE4Q8N205 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC5.45□□□□□ -1.54
SYNE4Q8N205 AKIRIN1P1-201ENST00000547384 544 ntBASIC5.45□□□□□ -1.54
SYNE4Q8N205 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC5.45□□□□□ -1.54
SYNE4Q8N205 TVP23BP1-201ENST00000557500 617 ntBASIC5.45□□□□□ -1.54
SYNE4Q8N205 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC5.45□□□□□ -1.54
SYNE4Q8N205 AC087465.1-201ENST00000560574 245 ntBASIC5.45□□□□□ -1.54
SYNE4Q8N205 CASC16-202ENST00000563844 610 ntTSL 3 BASIC5.45□□□□□ -1.54
SYNE4Q8N205 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC5.45□□□□□ -1.54
SYNE4Q8N205 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC5.45□□□□□ -1.54
SYNE4Q8N205 MIR3611-201ENST00000584484 83 ntBASIC5.45□□□□□ -1.54
SYNE4Q8N205 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC5.45□□□□□ -1.54
SYNE4Q8N205 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC5.45□□□□□ -1.54
SYNE4Q8N205 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
SYNE4Q8N205 AC139769.3-201ENST00000618383 175 ntBASIC5.45□□□□□ -1.54
SYNE4Q8N205 AC007546.1-201ENST00000619452 559 ntBASIC5.45□□□□□ -1.54
SYNE4Q8N205 AL590240.3-201ENST00000621416 943 ntBASIC5.45□□□□□ -1.54
SYNE4Q8N205 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC5.45□□□□□ -1.54
SYNE4Q8N205 PHACTR2P1-201ENST00000605639 1414 ntBASIC5.45□□□□□ -1.54
SYNE4Q8N205 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC5.45□□□□□ -1.54
SYNE4Q8N205 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
SYNE4Q8N205 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC5.45□□□□□ -1.54
SYNE4Q8N205 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
SYNE4Q8N205 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC5.45□□□□□ -1.54
SYNE4Q8N205 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC5.45□□□□□ -1.54
SYNE4Q8N205 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC5.45□□□□□ -1.54
SYNE4Q8N205 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
SYNE4Q8N205 AC068870.3-201ENST00000625077 2536 ntBASIC5.44□□□□□ -1.54
SYNE4Q8N205 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
SYNE4Q8N205 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 84.7 ms