Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 AL669831.4-202ENST00000590817 238 ntBASIC6□□□□□ -1.45
RNF43Q68DV7 AC009597.2-201ENST00000604659 592 ntBASIC6□□□□□ -1.45
RNF43Q68DV7 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC6□□□□□ -1.45
RNF43Q68DV7 AC097468.3-201ENST00000607956 456 ntBASIC6□□□□□ -1.45
RNF43Q68DV7 AC104237.2-201ENST00000612456 443 ntBASIC6□□□□□ -1.45
RNF43Q68DV7 DISC2.1-201ENST00000612827 205 ntBASIC6□□□□□ -1.45
RNF43Q68DV7 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC6□□□□□ -1.45
RNF43Q68DV7 CCL14-204ENST00000622526 472 ntTSL 3 BASIC6□□□□□ -1.45
RNF43Q68DV7 AP006248.2-201ENST00000623309 592 ntBASIC6□□□□□ -1.45
RNF43Q68DV7 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC6□□□□□ -1.45
RNF43Q68DV7 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
RNF43Q68DV7 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC6□□□□□ -1.45
RNF43Q68DV7 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC6□□□□□ -1.45
RNF43Q68DV7 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC6□□□□□ -1.45
RNF43Q68DV7 LINC01963-201ENST00000562038 3148 ntBASIC6□□□□□ -1.45
RNF43Q68DV7 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC6□□□□□ -1.45
RNF43Q68DV7 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
RNF43Q68DV7 SPAG6-209ENST00000538630 2376 ntTSL 5 BASIC6□□□□□ -1.45
RNF43Q68DV7 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC6□□□□□ -1.45
RNF43Q68DV7 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
RNF43Q68DV7 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
RNF43Q68DV7 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC5.99□□□□□ -1.45
RNF43Q68DV7 DCX-211ENST00000637570 6162 ntAPPRIS ALT1 TSL 5 BASIC5.99□□□□□ -1.45
RNF43Q68DV7 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC5.99□□□□□ -1.45
RNF43Q68DV7 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC5.99□□□□□ -1.45
RNF43Q68DV7 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
RNF43Q68DV7 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC5.99□□□□□ -1.45
RNF43Q68DV7 GNG5P1-201ENST00000255500 204 ntBASIC5.99□□□□□ -1.45
RNF43Q68DV7 OR5J1P-201ENST00000313544 939 ntBASIC5.99□□□□□ -1.45
RNF43Q68DV7 RNA5SP46-201ENST00000362370 120 ntBASIC5.99□□□□□ -1.45
RNF43Q68DV7 MIR585-201ENST00000384887 94 ntBASIC5.99□□□□□ -1.45
RNF43Q68DV7 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC5.99□□□□□ -1.45
RNF43Q68DV7 RPA3-203ENST00000401447 414 ntTSL 3 BASIC5.99□□□□□ -1.45
RNF43Q68DV7 MRM2-202ENST00000407040 582 ntTSL 3 BASIC5.99□□□□□ -1.45
RNF43Q68DV7 MTND3P8-201ENST00000412909 339 ntBASIC5.99□□□□□ -1.45
RNF43Q68DV7 AL450992.3-201ENST00000413192 568 ntBASIC5.99□□□□□ -1.45
RNF43Q68DV7 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC5.99□□□□□ -1.45
RNF43Q68DV7 TMBIM7P-201ENST00000418074 855 ntBASIC5.99□□□□□ -1.45
RNF43Q68DV7 RPL7P57-201ENST00000423238 740 ntBASIC5.99□□□□□ -1.45
RNF43Q68DV7 AL589872.1-201ENST00000426602 288 ntBASIC5.99□□□□□ -1.45
RNF43Q68DV7 AC073335.1-201ENST00000427776 363 ntBASIC5.99□□□□□ -1.45
RNF43Q68DV7 RPL36AP53-201ENST00000432891 316 ntBASIC5.99□□□□□ -1.45
RNF43Q68DV7 HSPE1P28-201ENST00000443139 211 ntBASIC5.99□□□□□ -1.45
RNF43Q68DV7 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC5.99□□□□□ -1.45
RNF43Q68DV7 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
RNF43Q68DV7 FRG2FP-204ENST00000453982 852 ntBASIC5.99□□□□□ -1.45
RNF43Q68DV7 RN7SL197P-201ENST00000466981 299 ntBASIC5.99□□□□□ -1.45
RNF43Q68DV7 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC5.99□□□□□ -1.45
RNF43Q68DV7 AC112204.1-201ENST00000502591 103 ntBASIC5.99□□□□□ -1.45
RNF43Q68DV7 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
RNF43Q68DV7 AC048346.1-201ENST00000510247 144 ntBASIC5.99□□□□□ -1.45
RNF43Q68DV7 Y_RNA.720-201ENST00000517166 92 ntBASIC5.99□□□□□ -1.45
RNF43Q68DV7 EIF4A2P5-201ENST00000529914 499 ntBASIC5.99□□□□□ -1.45
RNF43Q68DV7 OR10G5P-201ENST00000532733 358 ntBASIC5.99□□□□□ -1.45
RNF43Q68DV7 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
RNF43Q68DV7 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC5.99□□□□□ -1.45
RNF43Q68DV7 AC087241.2-201ENST00000535801 324 ntBASIC5.99□□□□□ -1.45
RNF43Q68DV7 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC5.99□□□□□ -1.45
RNF43Q68DV7 SUB1P2-201ENST00000556401 297 ntBASIC5.99□□□□□ -1.45
RNF43Q68DV7 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC5.99□□□□□ -1.45
RNF43Q68DV7 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC5.99□□□□□ -1.45
RNF43Q68DV7 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC5.99□□□□□ -1.45
RNF43Q68DV7 AC068790.5-201ENST00000602741 355 ntBASIC5.99□□□□□ -1.45
RNF43Q68DV7 AL451049.1-201ENST00000608672 497 ntBASIC5.99□□□□□ -1.45
RNF43Q68DV7 AL161734.1-201ENST00000609720 557 ntBASIC5.99□□□□□ -1.45
RNF43Q68DV7 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
RNF43Q68DV7 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC5.99□□□□□ -1.45
RNF43Q68DV7 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
RNF43Q68DV7 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
RNF43Q68DV7 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC5.99□□□□□ -1.45
RNF43Q68DV7 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC5.99□□□□□ -1.45
RNF43Q68DV7 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
RNF43Q68DV7 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC5.98□□□□□ -1.45
RNF43Q68DV7 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
RNF43Q68DV7 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC5.98□□□□□ -1.45
RNF43Q68DV7 AC099506.1-201ENST00000567359 4037 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
RNF43Q68DV7 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
RNF43Q68DV7 TRAPPC13-202ENST00000399438 3221 ntAPPRIS ALT1 TSL 2 BASIC5.98□□□□□ -1.45
RNF43Q68DV7 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC5.98□□□□□ -1.45
RNF43Q68DV7 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC5.98□□□□□ -1.45
RNF43Q68DV7 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC5.98□□□□□ -1.45
RNF43Q68DV7 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC5.98□□□□□ -1.45
RNF43Q68DV7 RN7SKP185-201ENST00000362813 326 ntBASIC5.98□□□□□ -1.45
RNF43Q68DV7 RNA5SP394-201ENST00000364216 119 ntBASIC5.98□□□□□ -1.45
RNF43Q68DV7 NFIB-202ENST00000380924 840 ntTSL 5 BASIC5.98□□□□□ -1.45
RNF43Q68DV7 Y_RNA.452-201ENST00000384202 108 ntBASIC5.98□□□□□ -1.45
RNF43Q68DV7 RNU6-510P-201ENST00000391239 108 ntBASIC5.98□□□□□ -1.45
RNF43Q68DV7 AC068050.1-201ENST00000394891 380 ntBASIC5.98□□□□□ -1.45
RNF43Q68DV7 MAST4-207ENST00000407621 559 ntTSL 2 BASIC5.98□□□□□ -1.45
RNF43Q68DV7 OR51A3P-201ENST00000413596 924 ntBASIC5.98□□□□□ -1.45
RNF43Q68DV7 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC5.98□□□□□ -1.45
RNF43Q68DV7 TEX41-204ENST00000423031 491 ntTSL 4 BASIC5.98□□□□□ -1.45
RNF43Q68DV7 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC5.98□□□□□ -1.45
RNF43Q68DV7 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC5.98□□□□□ -1.45
RNF43Q68DV7 AC126120.1-201ENST00000431082 470 ntBASIC5.98□□□□□ -1.45
RNF43Q68DV7 HMGB1P18-201ENST00000438801 619 ntBASIC5.98□□□□□ -1.45
RNF43Q68DV7 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC5.98□□□□□ -1.45
RNF43Q68DV7 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC5.98□□□□□ -1.45
RNF43Q68DV7 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC5.98□□□□□ -1.45
RNF43Q68DV7 BX248409.1-201ENST00000455497 255 ntBASIC5.98□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 77.2 ms