Protein–RNA interactions for Protein: Q12864

CDH17, Cadherin-17, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH17Q12864 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
CDH17Q12864 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC3.69□□□□□ -1.82
CDH17Q12864 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC3.68□□□□□ -1.82
CDH17Q12864 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC3.68□□□□□ -1.82
CDH17Q12864 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.68□□□□□ -1.82
CDH17Q12864 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
CDH17Q12864 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
CDH17Q12864 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.68□□□□□ -1.82
CDH17Q12864 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC3.68□□□□□ -1.82
CDH17Q12864 AC009237.5-201ENST00000414271 501 ntBASIC3.68□□□□□ -1.82
CDH17Q12864 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.68□□□□□ -1.82
CDH17Q12864 RPL7P2-201ENST00000427639 268 ntBASIC3.68□□□□□ -1.82
CDH17Q12864 AC008065.1-201ENST00000428525 348 ntBASIC3.68□□□□□ -1.82
CDH17Q12864 MRPS18BP2-201ENST00000434310 759 ntBASIC3.68□□□□□ -1.82
CDH17Q12864 LMO7DN-IT1-201ENST00000436872 321 ntTSL 3 BASIC3.68□□□□□ -1.82
CDH17Q12864 CEACAMP4-201ENST00000457676 421 ntBASIC3.68□□□□□ -1.82
CDH17Q12864 AC007537.2-201ENST00000472093 511 ntBASIC3.68□□□□□ -1.82
CDH17Q12864 RPL7P47-201ENST00000497299 556 ntBASIC3.68□□□□□ -1.82
CDH17Q12864 TRAV31-201ENST00000502780 342 ntBASIC3.68□□□□□ -1.82
CDH17Q12864 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC3.68□□□□□ -1.82
CDH17Q12864 RNU6-579P-201ENST00000516879 102 ntBASIC3.68□□□□□ -1.82
CDH17Q12864 IGKV2-36-201ENST00000519999 223 ntBASIC3.68□□□□□ -1.82
CDH17Q12864 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC3.68□□□□□ -1.82
CDH17Q12864 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC3.68□□□□□ -1.82
CDH17Q12864 AC023161.2-201ENST00000551218 780 ntBASIC3.68□□□□□ -1.82
CDH17Q12864 MTATP6P25-201ENST00000574491 261 ntBASIC3.68□□□□□ -1.82
CDH17Q12864 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.68□□□□□ -1.82
CDH17Q12864 AC073111.2-201ENST00000605657 1075 ntBASIC3.68□□□□□ -1.82
CDH17Q12864 RNA5SP108-201ENST00000605921 117 ntBASIC3.68□□□□□ -1.82
CDH17Q12864 AC084036.1-201ENST00000609190 508 ntBASIC3.68□□□□□ -1.82
CDH17Q12864 AC068831.8-201ENST00000620171 435 ntBASIC3.68□□□□□ -1.82
CDH17Q12864 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC3.68□□□□□ -1.82
CDH17Q12864 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
CDH17Q12864 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
CDH17Q12864 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
CDH17Q12864 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
CDH17Q12864 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.68□□□□□ -1.82
CDH17Q12864 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
CDH17Q12864 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC3.67□□□□□ -1.82
CDH17Q12864 NMD3P1-201ENST00000439704 1488 ntBASIC3.67□□□□□ -1.82
CDH17Q12864 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
CDH17Q12864 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
CDH17Q12864 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
CDH17Q12864 HNRNPDP2-201ENST00000406475 478 ntBASIC3.67□□□□□ -1.82
CDH17Q12864 SNORA57.3-201ENST00000411095 141 ntBASIC3.67□□□□□ -1.82
CDH17Q12864 AL512504.1-201ENST00000415494 778 ntBASIC3.67□□□□□ -1.82
CDH17Q12864 AC234782.4-201ENST00000417646 1048 ntBASIC3.67□□□□□ -1.82
CDH17Q12864 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.67□□□□□ -1.82
CDH17Q12864 AC002075.2-201ENST00000425207 252 ntBASIC3.67□□□□□ -1.82
CDH17Q12864 HMGB3P5-201ENST00000428894 612 ntBASIC3.67□□□□□ -1.82
CDH17Q12864 MTCO1P57-201ENST00000432182 261 ntBASIC3.67□□□□□ -1.82
CDH17Q12864 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC3.67□□□□□ -1.82
CDH17Q12864 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC3.67□□□□□ -1.82
CDH17Q12864 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC3.67□□□□□ -1.82
CDH17Q12864 TVP23BP2-201ENST00000455082 615 ntBASIC3.67□□□□□ -1.82
CDH17Q12864 AP002345.1-201ENST00000456493 928 ntBASIC3.67□□□□□ -1.82
CDH17Q12864 HMGB3P14-201ENST00000494195 599 ntBASIC3.67□□□□□ -1.82
CDH17Q12864 AC026402.1-201ENST00000513642 170 ntBASIC3.67□□□□□ -1.82
CDH17Q12864 AC010226.1-203ENST00000515570 765 ntTSL 2 BASIC3.67□□□□□ -1.82
CDH17Q12864 IGKV2-23-201ENST00000518729 323 ntBASIC3.67□□□□□ -1.82
CDH17Q12864 CARD8-211ENST00000519332 500 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
CDH17Q12864 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC3.67□□□□□ -1.82
CDH17Q12864 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC3.67□□□□□ -1.82
CDH17Q12864 AP000926.4-201ENST00000527351 454 ntBASIC3.67□□□□□ -1.82
CDH17Q12864 OR5AP1P-201ENST00000529730 940 ntBASIC3.67□□□□□ -1.82
CDH17Q12864 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC3.67□□□□□ -1.82
CDH17Q12864 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC3.67□□□□□ -1.82
CDH17Q12864 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.67□□□□□ -1.82
CDH17Q12864 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.67□□□□□ -1.82
CDH17Q12864 MIMT1-201ENST00000597105 1050 ntBASIC3.67□□□□□ -1.82
CDH17Q12864 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC3.67□□□□□ -1.82
CDH17Q12864 AC016717.3-201ENST00000624730 554 ntBASIC3.67□□□□□ -1.82
CDH17Q12864 AC138649.5-201ENST00000637456 137 ntBASIC3.67□□□□□ -1.82
CDH17Q12864 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
CDH17Q12864 PHF11-215ENST00000488958 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
CDH17Q12864 AC073073.2-201ENST00000609827 2578 ntBASIC3.66□□□□□ -1.82
CDH17Q12864 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
CDH17Q12864 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
CDH17Q12864 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
CDH17Q12864 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
CDH17Q12864 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC3.66□□□□□ -1.82
CDH17Q12864 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
CDH17Q12864 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
CDH17Q12864 RNA5SP42-201ENST00000364278 115 ntBASIC3.66□□□□□ -1.82
CDH17Q12864 RNA5SP479-201ENST00000364858 117 ntBASIC3.66□□□□□ -1.82
CDH17Q12864 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
CDH17Q12864 RPL7P60-201ENST00000397636 735 ntBASIC3.66□□□□□ -1.82
CDH17Q12864 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
CDH17Q12864 RN7SKP263-201ENST00000411194 309 ntBASIC3.66□□□□□ -1.82
CDH17Q12864 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC3.66□□□□□ -1.82
CDH17Q12864 AC245054.1-201ENST00000420944 258 ntBASIC3.66□□□□□ -1.82
CDH17Q12864 RPS29P31-201ENST00000446147 164 ntBASIC3.66□□□□□ -1.82
CDH17Q12864 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC3.66□□□□□ -1.82
CDH17Q12864 FTH1P2-201ENST00000466086 412 ntBASIC3.66□□□□□ -1.82
CDH17Q12864 RPS3AP50-201ENST00000487064 803 ntBASIC3.66□□□□□ -1.82
CDH17Q12864 LINC01192-207ENST00000492553 836 ntTSL 5 BASIC3.66□□□□□ -1.82
CDH17Q12864 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC3.66□□□□□ -1.82
CDH17Q12864 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC3.66□□□□□ -1.82
CDH17Q12864 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC3.66□□□□□ -1.82
CDH17Q12864 NPM1P41-201ENST00000512920 831 ntBASIC3.66□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 128.8 ms