Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC3.09□□□□□ -1.91
UBA52P62987 OR4A12P-201ENST00000530847 918 ntBASIC3.09□□□□□ -1.91
UBA52P62987 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC3.09□□□□□ -1.91
UBA52P62987 U6.105-201ENST00000637379 88 ntBASIC3.09□□□□□ -1.91
UBA52P62987 MTND5P1-201ENST00000445440 1375 ntBASIC3.09□□□□□ -1.92
UBA52P62987 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
UBA52P62987 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.09□□□□□ -1.92
UBA52P62987 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.08□□□□□ -1.92
UBA52P62987 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
UBA52P62987 RNA5SP383-201ENST00000362934 120 ntBASIC3.08□□□□□ -1.92
UBA52P62987 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
UBA52P62987 AC062031.1-201ENST00000414967 747 ntTSL 3 BASIC3.08□□□□□ -1.92
UBA52P62987 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC3.08□□□□□ -1.92
UBA52P62987 AC096644.3-201ENST00000416788 338 ntBASIC3.08□□□□□ -1.92
UBA52P62987 GTF2IP23-201ENST00000423746 351 ntBASIC3.08□□□□□ -1.92
UBA52P62987 AL138787.1-202ENST00000437804 898 ntBASIC3.08□□□□□ -1.92
UBA52P62987 FTH1P1-201ENST00000437933 532 ntBASIC3.08□□□□□ -1.92
UBA52P62987 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC3.08□□□□□ -1.92
UBA52P62987 AC018635.1-201ENST00000468292 1030 ntBASIC3.08□□□□□ -1.92
UBA52P62987 RN7SL293P-201ENST00000481765 281 ntBASIC3.08□□□□□ -1.92
UBA52P62987 AC106707.2-201ENST00000484182 374 ntBASIC3.08□□□□□ -1.92
UBA52P62987 LINC01192-207ENST00000492553 836 ntTSL 5 BASIC3.08□□□□□ -1.92
UBA52P62987 HMGB3P14-201ENST00000494195 599 ntBASIC3.08□□□□□ -1.92
UBA52P62987 PANCR-201ENST00000503456 493 ntTSL 5 BASIC3.08□□□□□ -1.92
UBA52P62987 RNA5SP164-201ENST00000516533 110 ntBASIC3.08□□□□□ -1.92
UBA52P62987 SCARNA13-201ENST00000516672 275 ntBASIC3.08□□□□□ -1.92
UBA52P62987 AC083923.2-202ENST00000517773 498 ntTSL 3 BASIC3.08□□□□□ -1.92
UBA52P62987 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC3.08□□□□□ -1.92
UBA52P62987 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC3.08□□□□□ -1.92
UBA52P62987 MIR3200-201ENST00000580767 85 ntBASIC3.08□□□□□ -1.92
UBA52P62987 AC005412.1-201ENST00000580812 1049 ntBASIC3.08□□□□□ -1.92
UBA52P62987 MIR5187-201ENST00000583479 76 ntBASIC3.08□□□□□ -1.92
UBA52P62987 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC3.08□□□□□ -1.92
UBA52P62987 AC010511.1-202ENST00000590229 573 ntTSL 4 BASIC3.08□□□□□ -1.92
UBA52P62987 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC3.08□□□□□ -1.92
UBA52P62987 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.08□□□□□ -1.92
UBA52P62987 ELOCP35-201ENST00000604289 336 ntBASIC3.08□□□□□ -1.92
UBA52P62987 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
UBA52P62987 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
UBA52P62987 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
UBA52P62987 AC090229.1-201ENST00000590983 1609 ntBASIC3.08□□□□□ -1.92
UBA52P62987 OR10AB1P-202ENST00000641219 1686 ntBASIC3.08□□□□□ -1.92
UBA52P62987 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
UBA52P62987 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
UBA52P62987 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
UBA52P62987 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
UBA52P62987 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.07□□□□□ -1.92
UBA52P62987 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
UBA52P62987 OR5M3-201ENST00000312240 1051 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
UBA52P62987 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC3.07□□□□□ -1.92
UBA52P62987 MIR218-2-201ENST00000385006 110 ntBASIC3.07□□□□□ -1.92
UBA52P62987 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
UBA52P62987 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC3.07□□□□□ -1.92
UBA52P62987 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC3.07□□□□□ -1.92
UBA52P62987 FAR1P1-201ENST00000427163 934 ntBASIC3.07□□□□□ -1.92
UBA52P62987 BX890604.2-201ENST00000427883 474 ntBASIC3.07□□□□□ -1.92
UBA52P62987 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC3.07□□□□□ -1.92
UBA52P62987 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
UBA52P62987 SUN3-208ENST00000453192 801 ntTSL 5 BASIC3.07□□□□□ -1.92
UBA52P62987 AC099563.1-201ENST00000456086 418 ntBASIC3.07□□□□□ -1.92
UBA52P62987 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.07□□□□□ -1.92
UBA52P62987 WBP1LP4-201ENST00000505043 344 ntBASIC3.07□□□□□ -1.92
UBA52P62987 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC3.07□□□□□ -1.92
UBA52P62987 HMGN1P15-201ENST00000513870 295 ntBASIC3.07□□□□□ -1.92
UBA52P62987 NRG1-IT1-201ENST00000520444 758 ntTSL 3 BASIC3.07□□□□□ -1.92
UBA52P62987 AC022695.1-201ENST00000522089 237 ntBASIC3.07□□□□□ -1.92
UBA52P62987 AC007991.1-201ENST00000522680 631 ntBASIC3.07□□□□□ -1.92
UBA52P62987 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
UBA52P62987 AP000889.1-201ENST00000530968 660 ntBASIC3.07□□□□□ -1.92
UBA52P62987 MTND5P21-201ENST00000531961 522 ntBASIC3.07□□□□□ -1.92
UBA52P62987 AC093014.1-201ENST00000548926 724 ntBASIC3.07□□□□□ -1.92
UBA52P62987 AP000919.1-202ENST00000581139 1264 ntBASIC3.07□□□□□ -1.92
UBA52P62987 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.07□□□□□ -1.92
UBA52P62987 BNIP3P38-201ENST00000601117 544 ntBASIC3.07□□□□□ -1.92
UBA52P62987 U6.98-201ENST00000637157 84 ntBASIC3.07□□□□□ -1.92
UBA52P62987 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC3.07□□□□□ -1.92
UBA52P62987 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
UBA52P62987 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
UBA52P62987 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.06□□□□□ -1.92
UBA52P62987 AL353746.1-201ENST00000566293 6881 ntBASIC3.06□□□□□ -1.92
UBA52P62987 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.06□□□□□ -1.92
UBA52P62987 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
UBA52P62987 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.06□□□□□ -1.92
UBA52P62987 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.06□□□□□ -1.92
UBA52P62987 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
UBA52P62987 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
UBA52P62987 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC3.06□□□□□ -1.92
UBA52P62987 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
UBA52P62987 EIF4EBP2P3-201ENST00000403144 334 ntBASIC3.06□□□□□ -1.92
UBA52P62987 AL583834.1-201ENST00000406943 343 ntBASIC3.06□□□□□ -1.92
UBA52P62987 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
UBA52P62987 UBE2Q2P12-201ENST00000414573 204 ntBASIC3.06□□□□□ -1.92
UBA52P62987 AC245052.5-201ENST00000416320 649 ntBASIC3.06□□□□□ -1.92
UBA52P62987 HMGB3P20-201ENST00000417997 600 ntBASIC3.06□□□□□ -1.92
UBA52P62987 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.06□□□□□ -1.92
UBA52P62987 TCEA1P2-201ENST00000420496 906 ntBASIC3.06□□□□□ -1.92
UBA52P62987 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC3.06□□□□□ -1.92
UBA52P62987 AP000907.1-201ENST00000428428 510 ntBASIC3.06□□□□□ -1.92
UBA52P62987 MRPS18BP2-201ENST00000434310 759 ntBASIC3.06□□□□□ -1.92
UBA52P62987 B3GNT2P1-201ENST00000434960 952 ntBASIC3.06□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 111.8 ms