Protein–RNA interactions for Protein: P62310

LSM3, U6 snRNA-associated Sm-like protein LSm3, humanhuman

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P62310 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC2.86□□□□□ -1.95
LSM3P62310 AC009396.1-201ENST00000553628 1079 ntTSL 2 BASIC2.86□□□□□ -1.95
LSM3P62310 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC2.86□□□□□ -1.95
LSM3P62310 RDM1-219ENST00000615378 542 ntTSL 3 BASIC2.86□□□□□ -1.95
LSM3P62310 XIST_intron.1-201ENST00000619444 68 ntBASIC2.86□□□□□ -1.95
LSM3P62310 MIR492-201ENST00000638676 116 ntBASIC2.86□□□□□ -1.95
LSM3P62310 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC2.86□□□□□ -1.95
LSM3P62310 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
LSM3P62310 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
LSM3P62310 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC2.85□□□□□ -1.95
LSM3P62310 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
LSM3P62310 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
LSM3P62310 AC000367.1-201ENST00000452711 1766 ntBASIC2.85□□□□□ -1.95
LSM3P62310 OR4A15-201ENST00000314706 1035 ntBASIC2.85□□□□□ -1.95
LSM3P62310 MIR372-201ENST00000362225 67 ntBASIC2.85□□□□□ -1.95
LSM3P62310 C1orf194-202ENST00000369945 534 ntTSL 5 BASIC2.85□□□□□ -1.95
LSM3P62310 MIR181B1-201ENST00000385240 110 ntBASIC2.85□□□□□ -1.95
LSM3P62310 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
LSM3P62310 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
LSM3P62310 RPL31P52-201ENST00000407532 367 ntBASIC2.85□□□□□ -1.95
LSM3P62310 SNORA81-201ENST00000408493 178 ntBASIC2.85□□□□□ -1.95
LSM3P62310 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC2.85□□□□□ -1.95
LSM3P62310 AC007390.1-201ENST00000415722 356 ntBASIC2.85□□□□□ -1.95
LSM3P62310 AL117339.2-201ENST00000430475 180 ntBASIC2.85□□□□□ -1.95
LSM3P62310 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
LSM3P62310 CACYBPP1-201ENST00000438592 684 ntBASIC2.85□□□□□ -1.95
LSM3P62310 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC2.85□□□□□ -1.95
LSM3P62310 AP000873.1-201ENST00000463987 400 ntBASIC2.85□□□□□ -1.95
LSM3P62310 Vault.1-201ENST00000516474 102 ntBASIC2.85□□□□□ -1.95
LSM3P62310 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC2.85□□□□□ -1.95
LSM3P62310 AP001180.3-201ENST00000582221 145 ntBASIC2.85□□□□□ -1.95
LSM3P62310 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC2.85□□□□□ -1.95
LSM3P62310 AC083760.1-201ENST00000589621 670 ntBASIC2.85□□□□□ -1.95
LSM3P62310 AC243960.1-203ENST00000595395 599 ntTSL 4 BASIC2.85□□□□□ -1.95
LSM3P62310 AL353811.1-202ENST00000602614 618 ntTSL 3 BASIC2.85□□□□□ -1.95
LSM3P62310 GXYLT1P4-203ENST00000616580 641 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
LSM3P62310 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC2.85□□□□□ -1.95
LSM3P62310 MIR6733-201ENST00000635723 61 ntBASIC2.85□□□□□ -1.95
LSM3P62310 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC2.85□□□□□ -1.95
LSM3P62310 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
LSM3P62310 AC093010.3-201ENST00000570269 15214 ntBASIC2.85□□□□□ -1.95
LSM3P62310 BRAFP1-201ENST00000445336 2703 ntBASIC2.84□□□□□ -1.95
LSM3P62310 AC012618.3-205ENST00000637896 1496 ntBASIC2.84□□□□□ -1.95
LSM3P62310 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
LSM3P62310 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC2.84□□□□□ -1.95
LSM3P62310 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
LSM3P62310 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
LSM3P62310 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC2.84□□□□□ -1.95
LSM3P62310 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC2.84□□□□□ -1.95
LSM3P62310 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC2.84□□□□□ -1.95
LSM3P62310 AL772161.1-201ENST00000439130 476 ntBASIC2.84□□□□□ -1.95
LSM3P62310 RPS12P18-201ENST00000442381 270 ntBASIC2.84□□□□□ -1.95
LSM3P62310 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC2.84□□□□□ -1.95
LSM3P62310 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC2.84□□□□□ -1.95
LSM3P62310 RPL7P19-201ENST00000469948 618 ntBASIC2.84□□□□□ -1.95
LSM3P62310 AC010460.1-201ENST00000507087 466 ntBASIC2.84□□□□□ -1.95
LSM3P62310 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC2.84□□□□□ -1.95
LSM3P62310 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC2.84□□□□□ -1.95
LSM3P62310 LINC2194-201ENST00000567127 454 ntTSL 3 BASIC2.84□□□□□ -1.95
LSM3P62310 MIR5096-201ENST00000583713 70 ntBASIC2.84□□□□□ -1.95
LSM3P62310 AC006116.7-201ENST00000590141 756 ntBASIC2.84□□□□□ -1.95
LSM3P62310 AC068790.4-201ENST00000602474 263 ntBASIC2.84□□□□□ -1.95
LSM3P62310 AC010591.1-201ENST00000603941 649 ntBASIC2.84□□□□□ -1.95
LSM3P62310 AL162713.1-201ENST00000604480 262 ntBASIC2.84□□□□□ -1.95
LSM3P62310 AC024940.4-201ENST00000605507 246 ntBASIC2.84□□□□□ -1.95
LSM3P62310 AC015802.5-201ENST00000607478 399 ntBASIC2.84□□□□□ -1.95
LSM3P62310 DARS-AS1-221ENST00000608471 532 ntTSL 5 BASIC2.84□□□□□ -1.95
LSM3P62310 DNAJC10-209ENST00000613960 1010 ntTSL 5 BASIC2.84□□□□□ -1.95
LSM3P62310 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC2.84□□□□□ -1.95
LSM3P62310 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
LSM3P62310 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC2.84□□□□□ -1.96
LSM3P62310 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC2.84□□□□□ -1.96
LSM3P62310 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC2.84□□□□□ -1.96
LSM3P62310 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC2.84□□□□□ -1.96
LSM3P62310 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
LSM3P62310 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC2.83□□□□□ -1.96
LSM3P62310 AL353743.4-201ENST00000422653 1547 ntBASIC2.83□□□□□ -1.96
LSM3P62310 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC2.83□□□□□ -1.96
LSM3P62310 AC091152.2-201ENST00000591628 2569 ntBASIC2.83□□□□□ -1.96
LSM3P62310 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
LSM3P62310 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
LSM3P62310 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
LSM3P62310 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
LSM3P62310 MIR124-3-201ENST00000384866 87 ntBASIC2.83□□□□□ -1.96
LSM3P62310 RNA5SP317-201ENST00000410176 116 ntBASIC2.83□□□□□ -1.96
LSM3P62310 RN7SKP156-201ENST00000410308 342 ntBASIC2.83□□□□□ -1.96
LSM3P62310 RNA5SP311-201ENST00000411290 116 ntBASIC2.83□□□□□ -1.96
LSM3P62310 AL356806.1-201ENST00000422524 916 ntBASIC2.83□□□□□ -1.96
LSM3P62310 YWHAZP7-201ENST00000436906 631 ntBASIC2.83□□□□□ -1.96
LSM3P62310 AL512625.3-204ENST00000438699 1031 ntTSL 5 BASIC2.83□□□□□ -1.96
LSM3P62310 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC2.83□□□□□ -1.96
LSM3P62310 TPT1P3-201ENST00000492841 512 ntBASIC2.83□□□□□ -1.96
LSM3P62310 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC2.83□□□□□ -1.96
LSM3P62310 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
LSM3P62310 AC108064.1-201ENST00000513791 460 ntBASIC2.83□□□□□ -1.96
LSM3P62310 RNA5SP315-201ENST00000516340 116 ntBASIC2.83□□□□□ -1.96
LSM3P62310 RNA5SP312-201ENST00000517068 116 ntBASIC2.83□□□□□ -1.96
LSM3P62310 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC2.83□□□□□ -1.96
LSM3P62310 AC079089.1-202ENST00000528800 1256 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
LSM3P62310 C1GALT1P1-201ENST00000548895 1089 ntBASIC2.83□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 97.2 ms