Protein–RNA interactions for Protein: P55344

LIM2, Lens fiber membrane intrinsic protein, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2P55344 VN1R88P-201ENST00000596787 292 ntBASIC3.62□□□□□ -1.83
LIM2P55344 AP002906.1-201ENST00000603405 233 ntBASIC3.62□□□□□ -1.83
LIM2P55344 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC3.62□□□□□ -1.83
LIM2P55344 AC026741.1-201ENST00000605892 482 ntBASIC3.62□□□□□ -1.83
LIM2P55344 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
LIM2P55344 AL356121.2-201ENST00000624715 780 ntBASIC3.62□□□□□ -1.83
LIM2P55344 CCT7-217ENST00000626868 249 ntTSL 5 BASIC3.62□□□□□ -1.83
LIM2P55344 AC017104.5-201ENST00000637647 639 ntBASIC3.62□□□□□ -1.83
LIM2P55344 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC3.62□□□□□ -1.83
LIM2P55344 LINC00561-201ENST00000565815 2738 ntBASIC3.62□□□□□ -1.83
LIM2P55344 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC3.62□□□□□ -1.83
LIM2P55344 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.62□□□□□ -1.83
LIM2P55344 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
LIM2P55344 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
LIM2P55344 AC119744.1-201ENST00000454746 1715 ntBASIC3.61□□□□□ -1.83
LIM2P55344 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC3.61□□□□□ -1.83
LIM2P55344 SLC2A3P1-201ENST00000519666 1451 ntBASIC3.61□□□□□ -1.83
LIM2P55344 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
LIM2P55344 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC3.61□□□□□ -1.83
LIM2P55344 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC3.61□□□□□ -1.83
LIM2P55344 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
LIM2P55344 ZNF849P-201ENST00000594711 1566 ntBASIC3.61□□□□□ -1.83
LIM2P55344 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
LIM2P55344 RN7SKP280-201ENST00000364196 304 ntBASIC3.61□□□□□ -1.83
LIM2P55344 RNU6-354P-201ENST00000383862 107 ntBASIC3.61□□□□□ -1.83
LIM2P55344 RNU6-610P-201ENST00000384264 107 ntBASIC3.61□□□□□ -1.83
LIM2P55344 MIR30B-201ENST00000384850 88 ntBASIC3.61□□□□□ -1.83
LIM2P55344 FABP12P1-201ENST00000401911 322 ntBASIC3.61□□□□□ -1.83
LIM2P55344 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC3.61□□□□□ -1.83
LIM2P55344 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC3.61□□□□□ -1.83
LIM2P55344 TRIM60P3Y-201ENST00000432201 673 ntBASIC3.61□□□□□ -1.83
LIM2P55344 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC3.61□□□□□ -1.83
LIM2P55344 AC092170.1-201ENST00000440211 356 ntBASIC3.61□□□□□ -1.83
LIM2P55344 AC002542.1-201ENST00000440683 193 ntBASIC3.61□□□□□ -1.83
LIM2P55344 AC092809.1-201ENST00000441469 474 ntBASIC3.61□□□□□ -1.83
LIM2P55344 AL353743.2-203ENST00000443630 492 ntTSL 3 BASIC3.61□□□□□ -1.83
LIM2P55344 RPL7P31-201ENST00000450192 724 ntBASIC3.61□□□□□ -1.83
LIM2P55344 AC084198.1-201ENST00000477747 402 ntBASIC3.61□□□□□ -1.83
LIM2P55344 GAPDHP36-201ENST00000480688 918 ntBASIC3.61□□□□□ -1.83
LIM2P55344 AC108941.1-201ENST00000502853 530 ntBASIC3.61□□□□□ -1.83
LIM2P55344 AC004069.2-201ENST00000505438 1114 ntBASIC3.61□□□□□ -1.83
LIM2P55344 RNA5SP164-201ENST00000516533 110 ntBASIC3.61□□□□□ -1.83
LIM2P55344 SCARNA14-201ENST00000516903 136 ntBASIC3.61□□□□□ -1.83
LIM2P55344 AC008802.1-201ENST00000519121 791 ntBASIC3.61□□□□□ -1.83
LIM2P55344 AC090079.2-201ENST00000575289 768 ntBASIC3.61□□□□□ -1.83
LIM2P55344 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC3.61□□□□□ -1.83
LIM2P55344 AL392112.1-201ENST00000605115 829 ntBASIC3.61□□□□□ -1.83
LIM2P55344 AC090912.3-201ENST00000609775 533 ntBASIC3.61□□□□□ -1.83
LIM2P55344 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
LIM2P55344 AP006248.2-201ENST00000623309 592 ntBASIC3.61□□□□□ -1.83
LIM2P55344 FTO-223ENST00000640179 210 ntTSL 5 BASIC3.61□□□□□ -1.83
LIM2P55344 AC018529.3-201ENST00000624212 2254 ntBASIC3.61□□□□□ -1.83
LIM2P55344 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC3.61□□□□□ -1.83
LIM2P55344 AC104446.1-201ENST00000613728 1321 ntBASIC3.61□□□□□ -1.83
LIM2P55344 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
LIM2P55344 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
LIM2P55344 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC3.61□□□□□ -1.83
LIM2P55344 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
LIM2P55344 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC3.61□□□□□ -1.83
LIM2P55344 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
LIM2P55344 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
LIM2P55344 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
LIM2P55344 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC3.6□□□□□ -1.83
LIM2P55344 DNAJC19P6-201ENST00000401853 280 ntBASIC3.6□□□□□ -1.83
LIM2P55344 HLFP1-201ENST00000402375 499 ntBASIC3.6□□□□□ -1.83
LIM2P55344 HNRNPDP2-201ENST00000406475 478 ntBASIC3.6□□□□□ -1.83
LIM2P55344 UQCRFS1P3-201ENST00000407697 385 ntBASIC3.6□□□□□ -1.83
LIM2P55344 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC3.6□□□□□ -1.83
LIM2P55344 RPL7P4-203ENST00000430239 730 ntBASIC3.6□□□□□ -1.83
LIM2P55344 LINC00972-202ENST00000438065 788 ntTSL 3 BASIC3.6□□□□□ -1.83
LIM2P55344 AC006994.1-201ENST00000438212 839 ntBASIC3.6□□□□□ -1.83
LIM2P55344 HSFY3P-201ENST00000444242 1191 ntBASIC3.6□□□□□ -1.83
LIM2P55344 AC044797.1-201ENST00000445744 679 ntBASIC3.6□□□□□ -1.83
LIM2P55344 AC096992.1-201ENST00000459808 709 ntBASIC3.6□□□□□ -1.83
LIM2P55344 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
LIM2P55344 RPS17P11-201ENST00000474297 293 ntBASIC3.6□□□□□ -1.83
LIM2P55344 AC104629.1-201ENST00000494226 508 ntBASIC3.6□□□□□ -1.83
LIM2P55344 HMGB1P21-201ENST00000502313 581 ntBASIC3.6□□□□□ -1.83
LIM2P55344 RAC1P2-201ENST00000511164 579 ntBASIC3.6□□□□□ -1.83
LIM2P55344 NPM1P41-201ENST00000512920 831 ntBASIC3.6□□□□□ -1.83
LIM2P55344 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC3.6□□□□□ -1.83
LIM2P55344 AC005798.1-201ENST00000513715 387 ntBASIC3.6□□□□□ -1.83
LIM2P55344 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC3.6□□□□□ -1.83
LIM2P55344 MIR2114-201ENST00000516645 80 ntBASIC3.6□□□□□ -1.83
LIM2P55344 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC3.6□□□□□ -1.83
LIM2P55344 AC090819.1-201ENST00000523800 1111 ntBASIC3.6□□□□□ -1.83
LIM2P55344 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
LIM2P55344 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC3.6□□□□□ -1.83
LIM2P55344 AC011611.5-201ENST00000552477 578 ntBASIC3.6□□□□□ -1.83
LIM2P55344 AC074029.1-201ENST00000552531 1044 ntBASIC3.6□□□□□ -1.83
LIM2P55344 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC3.6□□□□□ -1.83
LIM2P55344 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC3.6□□□□□ -1.83
LIM2P55344 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC3.6□□□□□ -1.83
LIM2P55344 HSPE1P5-201ENST00000561489 272 ntBASIC3.6□□□□□ -1.83
LIM2P55344 MIR5685-201ENST00000579080 79 ntBASIC3.6□□□□□ -1.83
LIM2P55344 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC3.6□□□□□ -1.83
LIM2P55344 AL137849.1-201ENST00000604767 169 ntBASIC3.6□□□□□ -1.83
LIM2P55344 BNIP3P19-201ENST00000605397 577 ntBASIC3.6□□□□□ -1.83
LIM2P55344 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC3.6□□□□□ -1.83
LIM2P55344 AL354760.1-201ENST00000608357 643 ntBASIC3.6□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 90.7 ms