Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC4□□□□□ -1.77
CDH11P55287 AC007327.1-201ENST00000447461 264 ntBASIC4□□□□□ -1.77
CDH11P55287 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
CDH11P55287 AC012671.1-201ENST00000451912 203 ntBASIC4□□□□□ -1.77
CDH11P55287 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC4□□□□□ -1.77
CDH11P55287 RNU6ATAC28P-201ENST00000459249 118 ntBASIC4□□□□□ -1.77
CDH11P55287 RPL21P71-201ENST00000465598 459 ntBASIC4□□□□□ -1.77
CDH11P55287 AC025445.1-201ENST00000502728 300 ntBASIC4□□□□□ -1.77
CDH11P55287 AC091951.3-201ENST00000504093 246 ntBASIC4□□□□□ -1.77
CDH11P55287 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC4□□□□□ -1.77
CDH11P55287 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC4□□□□□ -1.77
CDH11P55287 PARP4P3-201ENST00000510265 317 ntBASIC4□□□□□ -1.77
CDH11P55287 AC093840.1-201ENST00000511599 336 ntBASIC4□□□□□ -1.77
CDH11P55287 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC4□□□□□ -1.77
CDH11P55287 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC4□□□□□ -1.77
CDH11P55287 AF279873.1-201ENST00000523393 313 ntBASIC4□□□□□ -1.77
CDH11P55287 PHBP17-201ENST00000528576 541 ntBASIC4□□□□□ -1.77
CDH11P55287 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC4□□□□□ -1.77
CDH11P55287 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC4□□□□□ -1.77
CDH11P55287 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC4□□□□□ -1.77
CDH11P55287 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC4□□□□□ -1.77
CDH11P55287 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC4□□□□□ -1.77
CDH11P55287 AADACP1-206ENST00000561502 1193 ntBASIC4□□□□□ -1.77
CDH11P55287 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC4□□□□□ -1.77
CDH11P55287 AC022662.1-201ENST00000580252 331 ntBASIC4□□□□□ -1.77
CDH11P55287 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC4□□□□□ -1.77
CDH11P55287 VN1R78P-201ENST00000597393 564 ntBASIC4□□□□□ -1.77
CDH11P55287 AC008638.3-201ENST00000603341 463 ntBASIC4□□□□□ -1.77
CDH11P55287 AC068313.1-201ENST00000604028 1008 ntBASIC4□□□□□ -1.77
CDH11P55287 ELOCP35-201ENST00000604289 336 ntBASIC4□□□□□ -1.77
CDH11P55287 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC4□□□□□ -1.77
CDH11P55287 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC4□□□□□ -1.77
CDH11P55287 AP002782.1-201ENST00000623107 614 ntBASIC4□□□□□ -1.77
CDH11P55287 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC4□□□□□ -1.77
CDH11P55287 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC4□□□□□ -1.77
CDH11P55287 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC4□□□□□ -1.77
CDH11P55287 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
CDH11P55287 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC4□□□□□ -1.77
CDH11P55287 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC4□□□□□ -1.77
CDH11P55287 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
CDH11P55287 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC4□□□□□ -1.77
CDH11P55287 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC4□□□□□ -1.77
CDH11P55287 PHKBP1-201ENST00000450951 1951 ntBASIC4□□□□□ -1.77
CDH11P55287 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC4□□□□□ -1.77
CDH11P55287 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC4□□□□□ -1.77
CDH11P55287 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC3.99□□□□□ -1.77
CDH11P55287 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
CDH11P55287 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC3.99□□□□□ -1.77
CDH11P55287 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
CDH11P55287 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
CDH11P55287 RNU6-839P-201ENST00000363347 108 ntBASIC3.99□□□□□ -1.77
CDH11P55287 SNORD65.1-201ENST00000390889 71 ntBASIC3.99□□□□□ -1.77
CDH11P55287 SDHCP2-201ENST00000398565 501 ntBASIC3.99□□□□□ -1.77
CDH11P55287 AL590084.1-201ENST00000407885 387 ntBASIC3.99□□□□□ -1.77
CDH11P55287 MIR1911-201ENST00000410783 80 ntBASIC3.99□□□□□ -1.77
CDH11P55287 RAC1P3-201ENST00000416129 580 ntBASIC3.99□□□□□ -1.77
CDH11P55287 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC3.99□□□□□ -1.77
CDH11P55287 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC3.99□□□□□ -1.77
CDH11P55287 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC3.99□□□□□ -1.77
CDH11P55287 AC009965.2-201ENST00000425328 970 ntBASIC3.99□□□□□ -1.77
CDH11P55287 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC3.99□□□□□ -1.77
CDH11P55287 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC3.99□□□□□ -1.77
CDH11P55287 CETN4P-201ENST00000432407 469 ntBASIC3.99□□□□□ -1.77
CDH11P55287 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC3.99□□□□□ -1.77
CDH11P55287 RPS26P40-201ENST00000435209 294 ntBASIC3.99□□□□□ -1.77
CDH11P55287 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC3.99□□□□□ -1.77
CDH11P55287 COX7BP2-201ENST00000437976 242 ntBASIC3.99□□□□□ -1.77
CDH11P55287 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC3.99□□□□□ -1.77
CDH11P55287 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC3.99□□□□□ -1.77
CDH11P55287 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
CDH11P55287 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC3.99□□□□□ -1.77
CDH11P55287 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC3.99□□□□□ -1.77
CDH11P55287 AC026979.1-201ENST00000492525 396 ntBASIC3.99□□□□□ -1.77
CDH11P55287 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
CDH11P55287 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
CDH11P55287 DYNLL1P6-201ENST00000503440 264 ntBASIC3.99□□□□□ -1.77
CDH11P55287 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
CDH11P55287 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC3.99□□□□□ -1.77
CDH11P55287 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC3.99□□□□□ -1.77
CDH11P55287 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
CDH11P55287 RNA5SP135-201ENST00000517019 125 ntBASIC3.99□□□□□ -1.77
CDH11P55287 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC3.99□□□□□ -1.77
CDH11P55287 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC3.99□□□□□ -1.77
CDH11P55287 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC3.99□□□□□ -1.77
CDH11P55287 OR5M7P-201ENST00000526140 972 ntBASIC3.99□□□□□ -1.77
CDH11P55287 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC3.99□□□□□ -1.77
CDH11P55287 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC3.99□□□□□ -1.77
CDH11P55287 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC3.99□□□□□ -1.77
CDH11P55287 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC3.99□□□□□ -1.77
CDH11P55287 MTND3P12-201ENST00000559068 328 ntBASIC3.99□□□□□ -1.77
CDH11P55287 AC110743.1-201ENST00000584870 478 ntBASIC3.99□□□□□ -1.77
CDH11P55287 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC3.99□□□□□ -1.77
CDH11P55287 PCNAP1-202ENST00000595299 752 ntBASIC3.99□□□□□ -1.77
CDH11P55287 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC3.99□□□□□ -1.77
CDH11P55287 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC3.99□□□□□ -1.77
CDH11P55287 AC008782.1-201ENST00000603386 430 ntBASIC3.99□□□□□ -1.77
CDH11P55287 AC025811.1-201ENST00000604312 472 ntBASIC3.99□□□□□ -1.77
CDH11P55287 AC021749.1-201ENST00000604322 607 ntBASIC3.99□□□□□ -1.77
CDH11P55287 AL356218.2-201ENST00000605264 187 ntBASIC3.99□□□□□ -1.77
CDH11P55287 AC069545.1-201ENST00000605671 358 ntBASIC3.99□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 86.5 ms