Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 SNORD115-48-201ENST00000364764 76 ntBASIC4.17□□□□□ -1.74
HMGCS2P54868 RNU6-146P-201ENST00000384602 108 ntBASIC4.17□□□□□ -1.74
HMGCS2P54868 SNORA48.2-201ENST00000390926 124 ntBASIC4.17□□□□□ -1.74
HMGCS2P54868 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
HMGCS2P54868 HLFP1-201ENST00000402375 499 ntBASIC4.17□□□□□ -1.74
HMGCS2P54868 AL353692.2-201ENST00000407054 335 ntBASIC4.17□□□□□ -1.74
HMGCS2P54868 RN7SKP222-201ENST00000410651 315 ntBASIC4.17□□□□□ -1.74
HMGCS2P54868 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC4.17□□□□□ -1.74
HMGCS2P54868 HMGB3P20-201ENST00000417997 600 ntBASIC4.17□□□□□ -1.74
HMGCS2P54868 MTCO3P21-201ENST00000430791 643 ntBASIC4.17□□□□□ -1.74
HMGCS2P54868 AC005019.1-201ENST00000436455 431 ntBASIC4.17□□□□□ -1.74
HMGCS2P54868 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC4.17□□□□□ -1.74
HMGCS2P54868 AC098824.1-201ENST00000453565 980 ntBASIC4.17□□□□□ -1.74
HMGCS2P54868 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC4.17□□□□□ -1.74
HMGCS2P54868 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC4.17□□□□□ -1.74
HMGCS2P54868 RPL5P24-201ENST00000463742 885 ntBASIC4.17□□□□□ -1.74
HMGCS2P54868 CABYRP1-201ENST00000465493 1045 ntBASIC4.17□□□□□ -1.74
HMGCS2P54868 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC4.17□□□□□ -1.74
HMGCS2P54868 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC4.17□□□□□ -1.74
HMGCS2P54868 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC4.17□□□□□ -1.74
HMGCS2P54868 TRAV15-201ENST00000556680 249 ntBASIC4.17□□□□□ -1.74
HMGCS2P54868 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC4.17□□□□□ -1.74
HMGCS2P54868 GTF2IP8-201ENST00000560687 584 ntBASIC4.17□□□□□ -1.74
HMGCS2P54868 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC4.17□□□□□ -1.74
HMGCS2P54868 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC4.17□□□□□ -1.74
HMGCS2P54868 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC4.17□□□□□ -1.74
HMGCS2P54868 AC233280.2-201ENST00000603917 1070 ntBASIC4.17□□□□□ -1.74
HMGCS2P54868 AL390816.3-201ENST00000604527 1066 ntBASIC4.17□□□□□ -1.74
HMGCS2P54868 AP004372.1-201ENST00000604842 844 ntBASIC4.17□□□□□ -1.74
HMGCS2P54868 AL158211.2-201ENST00000607282 395 ntBASIC4.17□□□□□ -1.74
HMGCS2P54868 AC253576.2-201ENST00000618815 580 ntBASIC4.17□□□□□ -1.74
HMGCS2P54868 LYRM2-211ENST00000626778 696 ntTSL 5 BASIC4.17□□□□□ -1.74
HMGCS2P54868 ATL2-217ENST00000629272 1242 ntTSL 5 BASIC4.17□□□□□ -1.74
HMGCS2P54868 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.17□□□□□ -1.74
HMGCS2P54868 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
HMGCS2P54868 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC4.17□□□□□ -1.74
HMGCS2P54868 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.17□□□□□ -1.74
HMGCS2P54868 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.16□□□□□ -1.74
HMGCS2P54868 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.16□□□□□ -1.74
HMGCS2P54868 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC4.16□□□□□ -1.74
HMGCS2P54868 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
HMGCS2P54868 AC114546.3-201ENST00000623582 1734 ntBASIC4.16□□□□□ -1.74
HMGCS2P54868 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC4.16□□□□□ -1.74
HMGCS2P54868 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
HMGCS2P54868 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
HMGCS2P54868 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
HMGCS2P54868 RNA5SP52-201ENST00000362448 134 ntBASIC4.16□□□□□ -1.74
HMGCS2P54868 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC4.16□□□□□ -1.74
HMGCS2P54868 SNORD17-201ENST00000390930 237 ntBASIC4.16□□□□□ -1.74
HMGCS2P54868 RNU6ATAC10P-201ENST00000408635 111 ntBASIC4.16□□□□□ -1.74
HMGCS2P54868 AC048351.1-201ENST00000420064 602 ntBASIC4.16□□□□□ -1.74
HMGCS2P54868 MTND2P21-201ENST00000436242 1042 ntBASIC4.16□□□□□ -1.74
HMGCS2P54868 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC4.16□□□□□ -1.74
HMGCS2P54868 ELOCP8-201ENST00000439309 332 ntBASIC4.16□□□□□ -1.74
HMGCS2P54868 AL353748.1-201ENST00000440753 474 ntBASIC4.16□□□□□ -1.74
HMGCS2P54868 ELOCP15-201ENST00000442090 332 ntBASIC4.16□□□□□ -1.74
HMGCS2P54868 RPS6P2-201ENST00000454208 705 ntBASIC4.16□□□□□ -1.74
HMGCS2P54868 DCLRE1CP1-201ENST00000454630 470 ntBASIC4.16□□□□□ -1.74
HMGCS2P54868 RN7SL807P-201ENST00000470923 297 ntBASIC4.16□□□□□ -1.74
HMGCS2P54868 AC108729.2-201ENST00000476543 840 ntBASIC4.16□□□□□ -1.74
HMGCS2P54868 AC017015.1-201ENST00000477387 286 ntBASIC4.16□□□□□ -1.74
HMGCS2P54868 RPS29P2-201ENST00000479278 136 ntBASIC4.16□□□□□ -1.74
HMGCS2P54868 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC4.16□□□□□ -1.74
HMGCS2P54868 GMPSP1-201ENST00000514075 579 ntBASIC4.16□□□□□ -1.74
HMGCS2P54868 TBCA-206ENST00000518338 551 ntTSL 2 BASIC4.16□□□□□ -1.74
HMGCS2P54868 HMGB1P46-201ENST00000520062 610 ntBASIC4.16□□□□□ -1.74
HMGCS2P54868 HIGD1AP18-201ENST00000520730 278 ntBASIC4.16□□□□□ -1.74
HMGCS2P54868 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC4.16□□□□□ -1.74
HMGCS2P54868 AC022882.1-201ENST00000532142 501 ntBASIC4.16□□□□□ -1.74
HMGCS2P54868 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC4.16□□□□□ -1.74
HMGCS2P54868 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC4.16□□□□□ -1.74
HMGCS2P54868 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC4.16□□□□□ -1.74
HMGCS2P54868 RPL21P12-201ENST00000559810 515 ntBASIC4.16□□□□□ -1.74
HMGCS2P54868 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC4.16□□□□□ -1.74
HMGCS2P54868 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC4.16□□□□□ -1.74
HMGCS2P54868 AC068790.5-201ENST00000602741 355 ntBASIC4.16□□□□□ -1.74
HMGCS2P54868 MTCO3P22-201ENST00000603219 784 ntBASIC4.16□□□□□ -1.74
HMGCS2P54868 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC4.16□□□□□ -1.74
HMGCS2P54868 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC4.16□□□□□ -1.74
HMGCS2P54868 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
HMGCS2P54868 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC4.16□□□□□ -1.74
HMGCS2P54868 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
HMGCS2P54868 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC4.15□□□□□ -1.74
HMGCS2P54868 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.15□□□□□ -1.74
HMGCS2P54868 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.15□□□□□ -1.74
HMGCS2P54868 KLRF1-201ENST00000279545 1091 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
HMGCS2P54868 NAP1L1P2-201ENST00000414182 1089 ntBASIC4.15□□□□□ -1.75
HMGCS2P54868 BTF3P9-201ENST00000418784 283 ntBASIC4.15□□□□□ -1.75
HMGCS2P54868 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC4.15□□□□□ -1.75
HMGCS2P54868 ELOCP18-201ENST00000434209 337 ntBASIC4.15□□□□□ -1.75
HMGCS2P54868 NDUFB1P1-201ENST00000435191 180 ntBASIC4.15□□□□□ -1.75
HMGCS2P54868 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC4.15□□□□□ -1.75
HMGCS2P54868 U3.44-201ENST00000458938 192 ntBASIC4.15□□□□□ -1.75
HMGCS2P54868 RNU6-1218P-201ENST00000458990 108 ntBASIC4.15□□□□□ -1.75
HMGCS2P54868 MTND6P6-201ENST00000478031 263 ntBASIC4.15□□□□□ -1.75
HMGCS2P54868 AC073522.1-201ENST00000483312 377 ntBASIC4.15□□□□□ -1.75
HMGCS2P54868 AC093663.2-201ENST00000484625 313 ntBASIC4.15□□□□□ -1.75
HMGCS2P54868 LINC02430-201ENST00000504755 476 ntTSL 3 BASIC4.15□□□□□ -1.75
HMGCS2P54868 AC021146.7-201ENST00000509604 775 ntBASIC4.15□□□□□ -1.75
HMGCS2P54868 LEF1-218ENST00000512172 598 ntTSL 2 BASIC4.15□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 87.2 ms