Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 AL049737.1-201ENST00000413920 1403 ntBASIC4.12□□□□□ -1.75
PDX1P52945 SGO1P1-201ENST00000603525 1447 ntBASIC4.12□□□□□ -1.75
PDX1P52945 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC4.11□□□□□ -1.75
PDX1P52945 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.11□□□□□ -1.75
PDX1P52945 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
PDX1P52945 AL133243.3-201ENST00000617415 3004 ntBASIC4.11□□□□□ -1.75
PDX1P52945 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC4.11□□□□□ -1.75
PDX1P52945 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
PDX1P52945 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
PDX1P52945 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC4.11□□□□□ -1.75
PDX1P52945 RLIMP1-201ENST00000339626 1680 ntBASIC4.11□□□□□ -1.75
PDX1P52945 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
PDX1P52945 RNU6-707P-201ENST00000364647 95 ntBASIC4.11□□□□□ -1.75
PDX1P52945 RNA5SP513-201ENST00000364648 118 ntBASIC4.11□□□□□ -1.75
PDX1P52945 RNU6-619P-201ENST00000365146 108 ntBASIC4.11□□□□□ -1.75
PDX1P52945 ANAPC10P1-201ENST00000395991 556 ntBASIC4.11□□□□□ -1.75
PDX1P52945 MTCO2P31-201ENST00000402702 684 ntBASIC4.11□□□□□ -1.75
PDX1P52945 RPL31P52-201ENST00000407532 367 ntBASIC4.11□□□□□ -1.75
PDX1P52945 RNA5SP146-201ENST00000410743 123 ntBASIC4.11□□□□□ -1.75
PDX1P52945 SNORA74C-2-201ENST00000411179 201 ntBASIC4.11□□□□□ -1.75
PDX1P52945 CYCSP19-201ENST00000411715 316 ntBASIC4.11□□□□□ -1.75
PDX1P52945 OR51A3P-201ENST00000413596 924 ntBASIC4.11□□□□□ -1.75
PDX1P52945 PDSS1P1-201ENST00000422953 1114 ntBASIC4.11□□□□□ -1.75
PDX1P52945 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC4.11□□□□□ -1.75
PDX1P52945 RPS26P40-201ENST00000435209 294 ntBASIC4.11□□□□□ -1.75
PDX1P52945 MTND6P18-201ENST00000439477 513 ntBASIC4.11□□□□□ -1.75
PDX1P52945 AL512326.1-201ENST00000443050 721 ntBASIC4.11□□□□□ -1.75
PDX1P52945 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC4.11□□□□□ -1.75
PDX1P52945 RPL7L1P1-201ENST00000448259 785 ntBASIC4.11□□□□□ -1.75
PDX1P52945 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC4.11□□□□□ -1.75
PDX1P52945 AC239809.1-201ENST00000450470 217 ntBASIC4.11□□□□□ -1.75
PDX1P52945 AC233982.1-201ENST00000451247 436 ntBASIC4.11□□□□□ -1.75
PDX1P52945 VN1R32P-201ENST00000452234 905 ntBASIC4.11□□□□□ -1.75
PDX1P52945 MRPL42P4-201ENST00000453267 443 ntBASIC4.11□□□□□ -1.75
PDX1P52945 AC104689.1-201ENST00000473356 768 ntBASIC4.11□□□□□ -1.75
PDX1P52945 RN7SL132P-201ENST00000478131 296 ntBASIC4.11□□□□□ -1.75
PDX1P52945 RN7SL604P-201ENST00000492589 296 ntBASIC4.11□□□□□ -1.75
PDX1P52945 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC4.11□□□□□ -1.75
PDX1P52945 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC4.11□□□□□ -1.75
PDX1P52945 AC099522.1-202ENST00000514718 367 ntBASIC4.11□□□□□ -1.75
PDX1P52945 RNU1-45P-201ENST00000517191 141 ntBASIC4.11□□□□□ -1.75
PDX1P52945 AC023632.4-201ENST00000517783 191 ntBASIC4.11□□□□□ -1.75
PDX1P52945 AF279873.1-201ENST00000523393 313 ntBASIC4.11□□□□□ -1.75
PDX1P52945 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC4.11□□□□□ -1.75
PDX1P52945 AC004217.3-201ENST00000551552 878 ntBASIC4.11□□□□□ -1.75
PDX1P52945 AC023813.2-201ENST00000564321 469 ntBASIC4.11□□□□□ -1.75
PDX1P52945 MTND3P13-201ENST00000574391 343 ntBASIC4.11□□□□□ -1.75
PDX1P52945 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC4.11□□□□□ -1.75
PDX1P52945 BPTFP1-201ENST00000579209 492 ntBASIC4.11□□□□□ -1.75
PDX1P52945 MIR5708-201ENST00000579723 85 ntBASIC4.11□□□□□ -1.75
PDX1P52945 MIR4444-1-201ENST00000581696 74 ntBASIC4.11□□□□□ -1.75
PDX1P52945 MIR4444-2-201ENST00000584390 74 ntBASIC4.11□□□□□ -1.75
PDX1P52945 AC069304.3-201ENST00000603938 1084 ntBASIC4.11□□□□□ -1.75
PDX1P52945 AL008729.2-201ENST00000606393 473 ntBASIC4.11□□□□□ -1.75
PDX1P52945 RNU4-89P-201ENST00000607443 133 ntBASIC4.11□□□□□ -1.75
PDX1P52945 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC4.11□□□□□ -1.75
PDX1P52945 AP004247.3-201ENST00000608682 624 ntBASIC4.11□□□□□ -1.75
PDX1P52945 AL138478.1-201ENST00000612252 832 ntBASIC4.11□□□□□ -1.75
PDX1P52945 AC123768.4-201ENST00000616244 701 ntBASIC4.11□□□□□ -1.75
PDX1P52945 AL138721.1-201ENST00000616756 179 ntBASIC4.11□□□□□ -1.75
PDX1P52945 MIR6875-201ENST00000617506 72 ntBASIC4.11□□□□□ -1.75
PDX1P52945 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC4.11□□□□□ -1.75
PDX1P52945 UGP2-231ENST00000627474 264 ntTSL 5 BASIC4.11□□□□□ -1.75
PDX1P52945 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC4.11□□□□□ -1.75
PDX1P52945 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC4.11□□□□□ -1.75
PDX1P52945 FP325313.1-201ENST00000638228 703 ntBASIC4.11□□□□□ -1.75
PDX1P52945 MTND4P10-201ENST00000446199 1363 ntBASIC4.11□□□□□ -1.75
PDX1P52945 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
PDX1P52945 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
PDX1P52945 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC4.1□□□□□ -1.75
PDX1P52945 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
PDX1P52945 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
PDX1P52945 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
PDX1P52945 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
PDX1P52945 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.1□□□□□ -1.75
PDX1P52945 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.1□□□□□ -1.75
PDX1P52945 AL445437.1-201ENST00000623157 3087 ntBASIC4.1□□□□□ -1.75
PDX1P52945 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC4.1□□□□□ -1.75
PDX1P52945 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
PDX1P52945 AL512646.1-201ENST00000269395 1077 ntBASIC4.1□□□□□ -1.75
PDX1P52945 AC011155.1-201ENST00000316512 456 ntBASIC4.1□□□□□ -1.75
PDX1P52945 AC067945.1-201ENST00000342609 618 ntBASIC4.1□□□□□ -1.75
PDX1P52945 RNA5SP175-201ENST00000364275 119 ntBASIC4.1□□□□□ -1.75
PDX1P52945 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
PDX1P52945 RN7SKP202-201ENST00000410439 330 ntBASIC4.1□□□□□ -1.75
PDX1P52945 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC4.1□□□□□ -1.75
PDX1P52945 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC4.1□□□□□ -1.75
PDX1P52945 AL035246.1-201ENST00000433554 1255 ntBASIC4.1□□□□□ -1.75
PDX1P52945 AL353597.2-202ENST00000434901 373 ntBASIC4.1□□□□□ -1.75
PDX1P52945 ELOCP11-201ENST00000436690 332 ntBASIC4.1□□□□□ -1.75
PDX1P52945 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC4.1□□□□□ -1.75
PDX1P52945 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC4.1□□□□□ -1.75
PDX1P52945 ELOCP16-201ENST00000444494 332 ntBASIC4.1□□□□□ -1.75
PDX1P52945 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC4.1□□□□□ -1.75
PDX1P52945 RNF148-202ENST00000447240 839 ntTSL 2 BASIC4.1□□□□□ -1.75
PDX1P52945 AC104306.1-201ENST00000449702 371 ntBASIC4.1□□□□□ -1.75
PDX1P52945 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
PDX1P52945 AC022034.3-201ENST00000471393 478 ntBASIC4.1□□□□□ -1.75
PDX1P52945 AC069528.1-202ENST00000482888 637 ntBASIC4.1□□□□□ -1.75
PDX1P52945 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC4.1□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 75.4 ms