Protein–RNA interactions for Protein: P52701

MSH6, DNA mismatch repair protein Msh6, humanhuman

Predictions only

Length 1,360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6P52701 OR5H2-201ENST00000355273 945 ntBASIC4.76□□□□□ -1.65
MSH6P52701 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
MSH6P52701 HMGN1P24-201ENST00000412282 298 ntBASIC4.76□□□□□ -1.65
MSH6P52701 RPS12P5-201ENST00000423449 371 ntBASIC4.76□□□□□ -1.65
MSH6P52701 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC4.76□□□□□ -1.65
MSH6P52701 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC4.76□□□□□ -1.65
MSH6P52701 AF228730.2-201ENST00000438784 848 ntBASIC4.76□□□□□ -1.65
MSH6P52701 AC092809.1-201ENST00000441469 474 ntBASIC4.76□□□□□ -1.65
MSH6P52701 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC4.76□□□□□ -1.65
MSH6P52701 RPS6P4-201ENST00000494693 758 ntBASIC4.76□□□□□ -1.65
MSH6P52701 AC021678.1-201ENST00000505195 936 ntBASIC4.76□□□□□ -1.65
MSH6P52701 AC083923.2-202ENST00000517773 498 ntTSL 3 BASIC4.76□□□□□ -1.65
MSH6P52701 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC4.76□□□□□ -1.65
MSH6P52701 AL360157.1-201ENST00000565962 87 ntBASIC4.76□□□□□ -1.65
MSH6P52701 AC009464.1-201ENST00000615731 469 ntBASIC4.76□□□□□ -1.65
MSH6P52701 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC4.76□□□□□ -1.65
MSH6P52701 AC091905.1-201ENST00000624400 311 ntBASIC4.76□□□□□ -1.65
MSH6P52701 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
MSH6P52701 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.75□□□□□ -1.65
MSH6P52701 RNU1-18P-201ENST00000363062 164 ntBASIC4.75□□□□□ -1.65
MSH6P52701 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC4.75□□□□□ -1.65
MSH6P52701 AC239809.1-201ENST00000450470 217 ntBASIC4.75□□□□□ -1.65
MSH6P52701 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC4.75□□□□□ -1.65
MSH6P52701 LINC02505-203ENST00000515128 756 ntTSL 5 BASIC4.75□□□□□ -1.65
MSH6P52701 RNU6-943P-201ENST00000516960 98 ntBASIC4.75□□□□□ -1.65
MSH6P52701 AC022616.2-201ENST00000523185 300 ntBASIC4.75□□□□□ -1.65
MSH6P52701 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC4.75□□□□□ -1.65
MSH6P52701 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC4.75□□□□□ -1.65
MSH6P52701 AC087468.1-201ENST00000604365 630 ntBASIC4.75□□□□□ -1.65
MSH6P52701 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC4.75□□□□□ -1.65
MSH6P52701 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC4.75□□□□□ -1.65
MSH6P52701 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
MSH6P52701 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC4.75□□□□□ -1.65
MSH6P52701 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
MSH6P52701 OTUD4P1-201ENST00000237841 3067 ntBASIC4.74□□□□□ -1.65
MSH6P52701 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
MSH6P52701 TNPO1P3-201ENST00000436471 2662 ntBASIC4.74□□□□□ -1.65
MSH6P52701 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
MSH6P52701 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
MSH6P52701 RNA5SP235-201ENST00000365411 114 ntBASIC4.74□□□□□ -1.65
MSH6P52701 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
MSH6P52701 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
MSH6P52701 ERMN-204ENST00000409925 556 ntTSL 4 BASIC4.74□□□□□ -1.65
MSH6P52701 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC4.74□□□□□ -1.65
MSH6P52701 AL450263.2-201ENST00000439400 589 ntBASIC4.74□□□□□ -1.65
MSH6P52701 AC002553.2-201ENST00000453217 340 ntBASIC4.74□□□□□ -1.65
MSH6P52701 RPL7L1P13-201ENST00000511702 739 ntBASIC4.74□□□□□ -1.65
MSH6P52701 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC4.74□□□□□ -1.65
MSH6P52701 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC4.74□□□□□ -1.65
MSH6P52701 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC4.74□□□□□ -1.65
MSH6P52701 MIR3162-201ENST00000581818 82 ntBASIC4.74□□□□□ -1.65
MSH6P52701 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC4.74□□□□□ -1.65
MSH6P52701 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC4.74□□□□□ -1.65
MSH6P52701 AC017007.4-201ENST00000503353 1352 ntBASIC4.74□□□□□ -1.65
MSH6P52701 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
MSH6P52701 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
MSH6P52701 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
MSH6P52701 CRP-203ENST00000368111 512 ntTSL 3 BASIC4.73□□□□□ -1.65
MSH6P52701 GCNT6-201ENST00000379591 934 ntBASIC4.73□□□□□ -1.65
MSH6P52701 RNU6-729P-201ENST00000384399 107 ntBASIC4.73□□□□□ -1.65
MSH6P52701 AC234781.4-201ENST00000419384 244 ntBASIC4.73□□□□□ -1.65
MSH6P52701 RPL35AP12-201ENST00000425362 338 ntBASIC4.73□□□□□ -1.65
MSH6P52701 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC4.73□□□□□ -1.65
MSH6P52701 HMGB3P9-201ENST00000441799 583 ntBASIC4.73□□□□□ -1.65
MSH6P52701 AL589765.3-201ENST00000446084 462 ntBASIC4.73□□□□□ -1.65
MSH6P52701 RPL7P48-201ENST00000461513 746 ntBASIC4.73□□□□□ -1.65
MSH6P52701 RN7SL594P-201ENST00000470590 287 ntBASIC4.73□□□□□ -1.65
MSH6P52701 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC4.73□□□□□ -1.65
MSH6P52701 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC4.73□□□□□ -1.65
MSH6P52701 EPPIN-WFDC6-201ENST00000504988 1156 ntAPPRIS P1 TSL 2 BASIC4.73□□□□□ -1.65
MSH6P52701 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC4.73□□□□□ -1.65
MSH6P52701 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC4.73□□□□□ -1.65
MSH6P52701 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4.73□□□□□ -1.65
MSH6P52701 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC4.73□□□□□ -1.65
MSH6P52701 AC105094.2-202ENST00000590968 566 ntTSL 2 BASIC4.73□□□□□ -1.65
MSH6P52701 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
MSH6P52701 MIR486-1-201ENST00000612171 68 ntBASIC4.73□□□□□ -1.65
MSH6P52701 LINC00901.1-201ENST00000617252 152 ntBASIC4.73□□□□□ -1.65
MSH6P52701 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
MSH6P52701 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
MSH6P52701 AC007656.2-201ENST00000624902 4547 ntBASIC4.73□□□□□ -1.65
MSH6P52701 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
MSH6P52701 AC018529.3-201ENST00000624212 2254 ntBASIC4.72□□□□□ -1.65
MSH6P52701 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
MSH6P52701 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC4.72□□□□□ -1.65
MSH6P52701 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.65
MSH6P52701 U3.39-201ENST00000408569 239 ntBASIC4.72□□□□□ -1.65
MSH6P52701 SNORA79B-201ENST00000410557 148 ntBASIC4.72□□□□□ -1.65
MSH6P52701 SETP5-201ENST00000437270 562 ntBASIC4.72□□□□□ -1.65
MSH6P52701 AL356535.1-201ENST00000440335 398 ntBASIC4.72□□□□□ -1.65
MSH6P52701 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC4.72□□□□□ -1.65
MSH6P52701 PDLIM1P4-201ENST00000504327 1006 ntBASIC4.72□□□□□ -1.65
MSH6P52701 BTF3L4P4-201ENST00000506381 449 ntBASIC4.72□□□□□ -1.65
MSH6P52701 APOOP4-201ENST00000513530 597 ntBASIC4.72□□□□□ -1.65
MSH6P52701 RN7SKP209-201ENST00000516888 304 ntBASIC4.72□□□□□ -1.65
MSH6P52701 AC091819.2-201ENST00000522292 490 ntTSL 3 BASIC4.72□□□□□ -1.65
MSH6P52701 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC4.72□□□□□ -1.65
MSH6P52701 AL358913.1-201ENST00000554342 121 ntBASIC4.72□□□□□ -1.65
MSH6P52701 EIF1P6-201ENST00000600054 334 ntBASIC4.72□□□□□ -1.65
MSH6P52701 AC103858.2-201ENST00000621471 543 ntBASIC4.72□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 120.1 ms