Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 MIR6778-201ENST00000617912 73 ntBASIC4.3□□□□□ -1.72
SOX2P48431 AC090527.3-201ENST00000619041 548 ntBASIC4.3□□□□□ -1.72
SOX2P48431 AC019206.1-201ENST00000621938 425 ntBASIC4.3□□□□□ -1.72
SOX2P48431 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC4.3□□□□□ -1.72
SOX2P48431 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
SOX2P48431 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
SOX2P48431 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
SOX2P48431 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC4.3□□□□□ -1.72
SOX2P48431 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
SOX2P48431 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC4.3□□□□□ -1.72
SOX2P48431 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC4.3□□□□□ -1.72
SOX2P48431 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
SOX2P48431 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC4.3□□□□□ -1.72
SOX2P48431 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
SOX2P48431 AL356473.1-201ENST00000406203 1408 ntBASIC4.29□□□□□ -1.72
SOX2P48431 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC4.29□□□□□ -1.72
SOX2P48431 AC020743.2-201ENST00000639870 1370 ntTSL 5 BASIC4.29□□□□□ -1.72
SOX2P48431 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC4.29□□□□□ -1.72
SOX2P48431 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
SOX2P48431 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
SOX2P48431 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
SOX2P48431 RNU1-43P-201ENST00000365052 165 ntBASIC4.29□□□□□ -1.72
SOX2P48431 RNU6-441P-201ENST00000384545 106 ntBASIC4.29□□□□□ -1.72
SOX2P48431 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC4.29□□□□□ -1.72
SOX2P48431 AP000580.1-201ENST00000404439 358 ntBASIC4.29□□□□□ -1.72
SOX2P48431 AL512422.1-201ENST00000407033 553 ntBASIC4.29□□□□□ -1.72
SOX2P48431 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC4.29□□□□□ -1.72
SOX2P48431 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC4.29□□□□□ -1.72
SOX2P48431 AC073136.2-201ENST00000417282 849 ntBASIC4.29□□□□□ -1.72
SOX2P48431 UBTFL3-201ENST00000418934 1024 ntBASIC4.29□□□□□ -1.72
SOX2P48431 E2F6P2-201ENST00000420708 748 ntBASIC4.29□□□□□ -1.72
SOX2P48431 AL389915.1-201ENST00000422463 466 ntBASIC4.29□□□□□ -1.72
SOX2P48431 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC4.29□□□□□ -1.72
SOX2P48431 PRELID3BP10-201ENST00000431957 584 ntBASIC4.29□□□□□ -1.72
SOX2P48431 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC4.29□□□□□ -1.72
SOX2P48431 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC4.29□□□□□ -1.72
SOX2P48431 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC4.29□□□□□ -1.72
SOX2P48431 RPS26P56-201ENST00000444468 240 ntBASIC4.29□□□□□ -1.72
SOX2P48431 AL354714.3-201ENST00000447284 493 ntBASIC4.29□□□□□ -1.72
SOX2P48431 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC4.29□□□□□ -1.72
SOX2P48431 AL592447.1-201ENST00000447592 540 ntBASIC4.29□□□□□ -1.72
SOX2P48431 AC239809.1-201ENST00000450470 217 ntBASIC4.29□□□□□ -1.72
SOX2P48431 MTND1P27-201ENST00000451117 902 ntBASIC4.29□□□□□ -1.72
SOX2P48431 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC4.29□□□□□ -1.72
SOX2P48431 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC4.29□□□□□ -1.72
SOX2P48431 SSXP1-201ENST00000453640 473 ntBASIC4.29□□□□□ -1.72
SOX2P48431 UBTFL6-201ENST00000477929 1024 ntBASIC4.29□□□□□ -1.72
SOX2P48431 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC4.29□□□□□ -1.72
SOX2P48431 AC114981.1-201ENST00000503897 678 ntBASIC4.29□□□□□ -1.72
SOX2P48431 AC113430.1-201ENST00000506872 718 ntBASIC4.29□□□□□ -1.72
SOX2P48431 AC006499.2-201ENST00000513470 337 ntBASIC4.29□□□□□ -1.72
SOX2P48431 MTND5P4-201ENST00000514978 288 ntBASIC4.29□□□□□ -1.72
SOX2P48431 RNU6-150P-201ENST00000516237 95 ntBASIC4.29□□□□□ -1.72
SOX2P48431 E2F5-204ENST00000517476 1094 ntTSL 2 BASIC4.29□□□□□ -1.72
SOX2P48431 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC4.29□□□□□ -1.72
SOX2P48431 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC4.29□□□□□ -1.72
SOX2P48431 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC4.29□□□□□ -1.72
SOX2P48431 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC4.29□□□□□ -1.72
SOX2P48431 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC4.29□□□□□ -1.72
SOX2P48431 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC4.29□□□□□ -1.72
SOX2P48431 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC4.29□□□□□ -1.72
SOX2P48431 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC4.29□□□□□ -1.72
SOX2P48431 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC4.29□□□□□ -1.72
SOX2P48431 NMNAT1P1-201ENST00000554095 876 ntBASIC4.29□□□□□ -1.72
SOX2P48431 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC4.29□□□□□ -1.72
SOX2P48431 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC4.29□□□□□ -1.72
SOX2P48431 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC4.29□□□□□ -1.72
SOX2P48431 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC4.29□□□□□ -1.72
SOX2P48431 AC010546.1-201ENST00000569391 485 ntBASIC4.29□□□□□ -1.72
SOX2P48431 AC083760.1-201ENST00000589621 670 ntBASIC4.29□□□□□ -1.72
SOX2P48431 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC4.29□□□□□ -1.72
SOX2P48431 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC4.29□□□□□ -1.72
SOX2P48431 AC012065.4-201ENST00000602445 679 ntBASIC4.29□□□□□ -1.72
SOX2P48431 RNF138P2-201ENST00000603490 592 ntBASIC4.29□□□□□ -1.72
SOX2P48431 AC073648.5-201ENST00000603502 305 ntBASIC4.29□□□□□ -1.72
SOX2P48431 AC005084.1-201ENST00000605160 304 ntBASIC4.29□□□□□ -1.72
SOX2P48431 AL021997.1-201ENST00000605757 193 ntBASIC4.29□□□□□ -1.72
SOX2P48431 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC4.29□□□□□ -1.72
SOX2P48431 AC131238.1-201ENST00000617135 328 ntBASIC4.29□□□□□ -1.72
SOX2P48431 AC018755.4-201ENST00000619715 454 ntBASIC4.29□□□□□ -1.72
SOX2P48431 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC4.29□□□□□ -1.72
SOX2P48431 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
SOX2P48431 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
SOX2P48431 AC000123.3-201ENST00000624029 4975 ntBASIC4.29□□□□□ -1.72
SOX2P48431 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC4.29□□□□□ -1.72
SOX2P48431 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
SOX2P48431 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC4.29□□□□□ -1.72
SOX2P48431 AL359922.3-201ENST00000624779 1670 ntBASIC4.29□□□□□ -1.72
SOX2P48431 SMG1P6-201ENST00000532337 2930 ntBASIC4.28□□□□□ -1.72
SOX2P48431 MTND4P16-201ENST00000466108 1367 ntBASIC4.28□□□□□ -1.72
SOX2P48431 LYST-202ENST00000389794 12985 ntTSL 5 BASIC4.28□□□□□ -1.72
SOX2P48431 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
SOX2P48431 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.72
SOX2P48431 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
SOX2P48431 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.28□□□□□ -1.72
SOX2P48431 OR10J6P-201ENST00000289731 930 ntBASIC4.28□□□□□ -1.72
SOX2P48431 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
SOX2P48431 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC4.28□□□□□ -1.72
SOX2P48431 SNORA66-201ENST00000384792 133 ntBASIC4.28□□□□□ -1.72
SOX2P48431 MIR649-201ENST00000384843 97 ntBASIC4.28□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 102.9 ms