Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 AC006270.3-201ENST00000605967 1036 ntBASIC4.7□□□□□ -1.66
MMP13P45452 AC092794.1-201ENST00000612734 582 ntBASIC4.7□□□□□ -1.66
MMP13P45452 AP004607.9-201ENST00000618202 316 ntBASIC4.7□□□□□ -1.66
MMP13P45452 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
MMP13P45452 AL359740.1-201ENST00000624340 592 ntBASIC4.7□□□□□ -1.66
MMP13P45452 AL160394.1-201ENST00000624765 724 ntBASIC4.7□□□□□ -1.66
MMP13P45452 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC4.7□□□□□ -1.66
MMP13P45452 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC4.7□□□□□ -1.66
MMP13P45452 ZNF663P-202ENST00000641770 1131 ntBASIC4.7□□□□□ -1.66
MMP13P45452 AL391684.1-202ENST00000641293 1636 ntBASIC4.7□□□□□ -1.66
MMP13P45452 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
MMP13P45452 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC4.7□□□□□ -1.66
MMP13P45452 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
MMP13P45452 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC4.7□□□□□ -1.66
MMP13P45452 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
MMP13P45452 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC4.7□□□□□ -1.66
MMP13P45452 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
MMP13P45452 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
MMP13P45452 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.69□□□□□ -1.66
MMP13P45452 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.69□□□□□ -1.66
MMP13P45452 BTBD10P1-201ENST00000549824 1352 ntBASIC4.69□□□□□ -1.66
MMP13P45452 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
MMP13P45452 MTND5P24-201ENST00000438892 1767 ntBASIC4.69□□□□□ -1.66
MMP13P45452 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC4.69□□□□□ -1.66
MMP13P45452 AC103591.2-201ENST00000265259 766 ntBASIC4.69□□□□□ -1.66
MMP13P45452 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
MMP13P45452 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
MMP13P45452 OR1L1-202ENST00000373686 1083 ntBASIC4.69□□□□□ -1.66
MMP13P45452 RNU6-1215P-201ENST00000384441 102 ntBASIC4.69□□□□□ -1.66
MMP13P45452 Y_RNA.516-201ENST00000384541 124 ntBASIC4.69□□□□□ -1.66
MMP13P45452 MT-TH-201ENST00000387441 69 ntBASIC4.69□□□□□ -1.66
MMP13P45452 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
MMP13P45452 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC4.69□□□□□ -1.66
MMP13P45452 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
MMP13P45452 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
MMP13P45452 AL359265.2-201ENST00000434367 631 ntBASIC4.69□□□□□ -1.66
MMP13P45452 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC4.69□□□□□ -1.66
MMP13P45452 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC4.69□□□□□ -1.66
MMP13P45452 AL591503.2-201ENST00000442314 1005 ntBASIC4.69□□□□□ -1.66
MMP13P45452 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC4.69□□□□□ -1.66
MMP13P45452 AL935212.3-201ENST00000450729 284 ntBASIC4.69□□□□□ -1.66
MMP13P45452 ISCUP1-201ENST00000454451 448 ntBASIC4.69□□□□□ -1.66
MMP13P45452 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC4.69□□□□□ -1.66
MMP13P45452 SCARNA10-201ENST00000459255 330 ntBASIC4.69□□□□□ -1.66
MMP13P45452 RPL30P6-201ENST00000475925 342 ntBASIC4.69□□□□□ -1.66
MMP13P45452 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC4.69□□□□□ -1.66
MMP13P45452 RNA5SP228-201ENST00000516232 133 ntBASIC4.69□□□□□ -1.66
MMP13P45452 Y_RNA.695-201ENST00000516715 107 ntBASIC4.69□□□□□ -1.66
MMP13P45452 NAP1L1P1-201ENST00000524793 1063 ntBASIC4.69□□□□□ -1.66
MMP13P45452 HIGD1AP10-201ENST00000527837 282 ntBASIC4.69□□□□□ -1.66
MMP13P45452 AL139174.1-201ENST00000531489 886 ntBASIC4.69□□□□□ -1.66
MMP13P45452 MIR5708-201ENST00000579723 85 ntBASIC4.69□□□□□ -1.66
MMP13P45452 RN7SL690P-201ENST00000582087 240 ntBASIC4.69□□□□□ -1.66
MMP13P45452 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC4.69□□□□□ -1.66
MMP13P45452 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC4.69□□□□□ -1.66
MMP13P45452 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC4.69□□□□□ -1.66
MMP13P45452 AF131215.7-201ENST00000602443 707 ntBASIC4.69□□□□□ -1.66
MMP13P45452 DUXAP11-201ENST00000603858 526 ntBASIC4.69□□□□□ -1.66
MMP13P45452 AL136363.2-201ENST00000604173 851 ntBASIC4.69□□□□□ -1.66
MMP13P45452 AL133338.2-201ENST00000604292 736 ntBASIC4.69□□□□□ -1.66
MMP13P45452 AP002360.3-201ENST00000607673 710 ntBASIC4.69□□□□□ -1.66
MMP13P45452 AL590240.3-201ENST00000621416 943 ntBASIC4.69□□□□□ -1.66
MMP13P45452 AC009878.1-201ENST00000621819 340 ntBASIC4.69□□□□□ -1.66
MMP13P45452 PDCD6IPP1-202ENST00000622242 1064 ntBASIC4.69□□□□□ -1.66
MMP13P45452 AF001550.2-201ENST00000636643 217 ntBASIC4.69□□□□□ -1.66
MMP13P45452 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
MMP13P45452 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.69□□□□□ -1.66
MMP13P45452 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
MMP13P45452 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
MMP13P45452 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
MMP13P45452 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
MMP13P45452 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC4.69□□□□□ -1.66
MMP13P45452 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
MMP13P45452 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC4.69□□□□□ -1.66
MMP13P45452 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
MMP13P45452 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.68□□□□□ -1.66
MMP13P45452 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
MMP13P45452 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
MMP13P45452 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
MMP13P45452 RNU6-1283P-201ENST00000365314 105 ntBASIC4.68□□□□□ -1.66
MMP13P45452 RHOT1P2-201ENST00000366423 333 ntBASIC4.68□□□□□ -1.66
MMP13P45452 RNU6-532P-201ENST00000384318 107 ntBASIC4.68□□□□□ -1.66
MMP13P45452 Y_RNA.517-201ENST00000384551 106 ntBASIC4.68□□□□□ -1.66
MMP13P45452 MIR320B1-201ENST00000390209 79 ntBASIC4.68□□□□□ -1.66
MMP13P45452 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
MMP13P45452 DEFB108C-201ENST00000400154 252 ntBASIC4.68□□□□□ -1.66
MMP13P45452 DNAJC19P6-201ENST00000401853 280 ntBASIC4.68□□□□□ -1.66
MMP13P45452 AL049697.2-201ENST00000403708 294 ntBASIC4.68□□□□□ -1.66
MMP13P45452 NCSTNP1-201ENST00000406229 144 ntBASIC4.68□□□□□ -1.66
MMP13P45452 MTND1P23-201ENST00000416931 372 ntBASIC4.68□□□□□ -1.66
MMP13P45452 UBTFL3-201ENST00000418934 1024 ntBASIC4.68□□□□□ -1.66
MMP13P45452 MTCO2P34-201ENST00000421994 607 ntBASIC4.68□□□□□ -1.66
MMP13P45452 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC4.68□□□□□ -1.66
MMP13P45452 MTCYBP5-201ENST00000423752 1135 ntBASIC4.68□□□□□ -1.66
MMP13P45452 MTCO3P21-201ENST00000430791 643 ntBASIC4.68□□□□□ -1.66
MMP13P45452 YWHAEP5-201ENST00000431545 765 ntBASIC4.68□□□□□ -1.66
MMP13P45452 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC4.68□□□□□ -1.66
MMP13P45452 AC069285.2-201ENST00000440210 275 ntBASIC4.68□□□□□ -1.66
MMP13P45452 MTND3P1-201ENST00000441336 220 ntBASIC4.68□□□□□ -1.66
MMP13P45452 AL589765.3-201ENST00000446084 462 ntBASIC4.68□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 74.3 ms