Protein–RNA interactions for Protein: P43489

TNFRSF4, Tumor necrosis factor receptor superfamily member 4, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF4P43489 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC3.97□□□□□ -1.77
TNFRSF4P43489 AC008280.2-201ENST00000455473 307 ntBASIC3.97□□□□□ -1.77
TNFRSF4P43489 BX248409.1-201ENST00000455497 255 ntBASIC3.97□□□□□ -1.77
TNFRSF4P43489 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC3.97□□□□□ -1.77
TNFRSF4P43489 TPT1P1-201ENST00000458495 518 ntBASIC3.97□□□□□ -1.77
TNFRSF4P43489 AC015908.1-201ENST00000478739 476 ntBASIC3.97□□□□□ -1.77
TNFRSF4P43489 AC006499.5-201ENST00000505037 514 ntBASIC3.97□□□□□ -1.77
TNFRSF4P43489 AC016550.1-201ENST00000505348 785 ntBASIC3.97□□□□□ -1.77
TNFRSF4P43489 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC3.97□□□□□ -1.77
TNFRSF4P43489 RNA5SP164-201ENST00000516533 110 ntBASIC3.97□□□□□ -1.77
TNFRSF4P43489 AC087369.1-201ENST00000520775 996 ntBASIC3.97□□□□□ -1.77
TNFRSF4P43489 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC3.97□□□□□ -1.77
TNFRSF4P43489 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC3.97□□□□□ -1.77
TNFRSF4P43489 OR4A12P-201ENST00000530847 918 ntBASIC3.97□□□□□ -1.77
TNFRSF4P43489 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC3.97□□□□□ -1.77
TNFRSF4P43489 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC3.97□□□□□ -1.77
TNFRSF4P43489 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC3.97□□□□□ -1.77
TNFRSF4P43489 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC3.97□□□□□ -1.77
TNFRSF4P43489 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC3.97□□□□□ -1.77
TNFRSF4P43489 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
TNFRSF4P43489 AC023824.3-201ENST00000569003 562 ntBASIC3.97□□□□□ -1.77
TNFRSF4P43489 RN7SL622P-201ENST00000585292 275 ntBASIC3.97□□□□□ -1.77
TNFRSF4P43489 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC3.97□□□□□ -1.77
TNFRSF4P43489 AC115621.1-201ENST00000604653 858 ntBASIC3.97□□□□□ -1.77
TNFRSF4P43489 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC3.97□□□□□ -1.77
TNFRSF4P43489 AC244100.1-202ENST00000621554 382 ntBASIC3.97□□□□□ -1.77
TNFRSF4P43489 AP000943.4-201ENST00000622912 357 ntBASIC3.97□□□□□ -1.77
TNFRSF4P43489 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
TNFRSF4P43489 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
TNFRSF4P43489 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC3.97□□□□□ -1.77
TNFRSF4P43489 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC3.97□□□□□ -1.77
TNFRSF4P43489 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
TNFRSF4P43489 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
TNFRSF4P43489 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC3.97□□□□□ -1.77
TNFRSF4P43489 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
TNFRSF4P43489 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.77
TNFRSF4P43489 LINC00561-201ENST00000565815 2738 ntBASIC3.96□□□□□ -1.78
TNFRSF4P43489 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC3.96□□□□□ -1.78
TNFRSF4P43489 OR52B1P-201ENST00000316506 909 ntBASIC3.96□□□□□ -1.78
TNFRSF4P43489 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC3.96□□□□□ -1.78
TNFRSF4P43489 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC3.96□□□□□ -1.78
TNFRSF4P43489 RPL21P17-201ENST00000397467 475 ntBASIC3.96□□□□□ -1.78
TNFRSF4P43489 IL6-203ENST00000401651 539 ntTSL 2 BASIC3.96□□□□□ -1.78
TNFRSF4P43489 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
TNFRSF4P43489 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC3.96□□□□□ -1.78
TNFRSF4P43489 AL139247.1-201ENST00000422768 325 ntBASIC3.96□□□□□ -1.78
TNFRSF4P43489 AL591419.1-201ENST00000427423 339 ntBASIC3.96□□□□□ -1.78
TNFRSF4P43489 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC3.96□□□□□ -1.78
TNFRSF4P43489 RPL21P110-201ENST00000433345 446 ntBASIC3.96□□□□□ -1.78
TNFRSF4P43489 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
TNFRSF4P43489 RPS26P30-201ENST00000443431 335 ntBASIC3.96□□□□□ -1.78
TNFRSF4P43489 MTND1P33-201ENST00000446251 917 ntBASIC3.96□□□□□ -1.78
TNFRSF4P43489 GXYLT1P1-201ENST00000446657 490 ntBASIC3.96□□□□□ -1.78
TNFRSF4P43489 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC3.96□□□□□ -1.78
TNFRSF4P43489 PDSS1P2-201ENST00000449397 678 ntBASIC3.96□□□□□ -1.78
TNFRSF4P43489 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC3.96□□□□□ -1.78
TNFRSF4P43489 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
TNFRSF4P43489 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC3.96□□□□□ -1.78
TNFRSF4P43489 AC126121.1-201ENST00000482313 553 ntBASIC3.96□□□□□ -1.78
TNFRSF4P43489 AC104629.1-201ENST00000494226 508 ntBASIC3.96□□□□□ -1.78
TNFRSF4P43489 AC090071.1-201ENST00000507713 644 ntBASIC3.96□□□□□ -1.78
TNFRSF4P43489 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC3.96□□□□□ -1.78
TNFRSF4P43489 RNU5A-7P-201ENST00000515979 116 ntBASIC3.96□□□□□ -1.78
TNFRSF4P43489 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC3.96□□□□□ -1.78
TNFRSF4P43489 PTP4A1P6-201ENST00000531034 478 ntBASIC3.96□□□□□ -1.78
TNFRSF4P43489 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC3.96□□□□□ -1.78
TNFRSF4P43489 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC3.96□□□□□ -1.78
TNFRSF4P43489 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC3.96□□□□□ -1.78
TNFRSF4P43489 AC007599.1-201ENST00000568688 1174 ntBASIC3.96□□□□□ -1.78
TNFRSF4P43489 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC3.96□□□□□ -1.78
TNFRSF4P43489 AP002906.1-201ENST00000603405 233 ntBASIC3.96□□□□□ -1.78
TNFRSF4P43489 AC091488.1-201ENST00000604239 660 ntBASIC3.96□□□□□ -1.78
TNFRSF4P43489 AL049634.3-201ENST00000604968 457 ntBASIC3.96□□□□□ -1.78
TNFRSF4P43489 AC026979.4-201ENST00000606555 645 ntBASIC3.96□□□□□ -1.78
TNFRSF4P43489 AC092953.2-201ENST00000608000 699 ntBASIC3.96□□□□□ -1.78
TNFRSF4P43489 AL391262.2-201ENST00000622466 494 ntBASIC3.96□□□□□ -1.78
TNFRSF4P43489 AC068880.4-201ENST00000623082 495 ntBASIC3.96□□□□□ -1.78
TNFRSF4P43489 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC3.96□□□□□ -1.78
TNFRSF4P43489 AC067931.1-201ENST00000624190 671 ntBASIC3.96□□□□□ -1.78
TNFRSF4P43489 AL034408.1-202ENST00000636088 415 ntBASIC3.96□□□□□ -1.78
TNFRSF4P43489 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC3.96□□□□□ -1.78
TNFRSF4P43489 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
TNFRSF4P43489 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC3.96□□□□□ -1.78
TNFRSF4P43489 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
TNFRSF4P43489 ZNF849P-201ENST00000594711 1566 ntBASIC3.96□□□□□ -1.78
TNFRSF4P43489 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
TNFRSF4P43489 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC3.96□□□□□ -1.78
TNFRSF4P43489 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC3.96□□□□□ -1.78
TNFRSF4P43489 AP001273.1-201ENST00000624493 3152 ntBASIC3.96□□□□□ -1.78
TNFRSF4P43489 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
TNFRSF4P43489 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
TNFRSF4P43489 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC3.95□□□□□ -1.78
TNFRSF4P43489 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC3.95□□□□□ -1.78
TNFRSF4P43489 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC3.95□□□□□ -1.78
TNFRSF4P43489 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC3.95□□□□□ -1.78
TNFRSF4P43489 HSP90AA5P-201ENST00000438353 2192 ntBASIC3.95□□□□□ -1.78
TNFRSF4P43489 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC3.95□□□□□ -1.78
TNFRSF4P43489 RNU6-1279P-201ENST00000383917 103 ntBASIC3.95□□□□□ -1.78
TNFRSF4P43489 RNU6-468P-201ENST00000384003 109 ntBASIC3.95□□□□□ -1.78
TNFRSF4P43489 SNORA5A-201ENST00000384111 134 ntBASIC3.95□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 148.5 ms