Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 RPL7P12-201ENST00000446719 750 ntBASIC3.43□□□□□ -1.86
HTTP42858 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC3.43□□□□□ -1.86
HTTP42858 ANP32BP2-201ENST00000454525 545 ntBASIC3.43□□□□□ -1.86
HTTP42858 AC021205.1-201ENST00000468797 348 ntBASIC3.43□□□□□ -1.86
HTTP42858 AC083906.5-201ENST00000503722 328 ntBASIC3.43□□□□□ -1.86
HTTP42858 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC3.43□□□□□ -1.86
HTTP42858 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
HTTP42858 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
HTTP42858 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC3.43□□□□□ -1.86
HTTP42858 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.43□□□□□ -1.86
HTTP42858 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
HTTP42858 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC3.43□□□□□ -1.86
HTTP42858 AC112198.2-201ENST00000426589 6996 ntBASIC3.43□□□□□ -1.86
HTTP42858 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC3.43□□□□□ -1.86
HTTP42858 MIR512-1-201ENST00000384913 84 ntBASIC3.43□□□□□ -1.86
HTTP42858 MIR764-201ENST00000390811 85 ntBASIC3.43□□□□□ -1.86
HTTP42858 SEPT7P2-202ENST00000398921 823 ntBASIC3.43□□□□□ -1.86
HTTP42858 ANKRD30BP3-201ENST00000444850 1070 ntBASIC3.43□□□□□ -1.86
HTTP42858 AC005229.2-201ENST00000456995 399 ntBASIC3.43□□□□□ -1.86
HTTP42858 RPS3AP50-201ENST00000487064 803 ntBASIC3.43□□□□□ -1.86
HTTP42858 LINC02506-201ENST00000513211 734 ntTSL 3 BASIC3.43□□□□□ -1.86
HTTP42858 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC3.43□□□□□ -1.86
HTTP42858 DPPA3P2-201ENST00000553589 478 ntBASIC3.43□□□□□ -1.86
HTTP42858 AC013652.1-202ENST00000561058 570 ntTSL 4 BASIC3.43□□□□□ -1.86
HTTP42858 PRELID3BP8-201ENST00000604148 295 ntBASIC3.43□□□□□ -1.86
HTTP42858 LSM1P2-201ENST00000604911 322 ntBASIC3.43□□□□□ -1.86
HTTP42858 AL356321.1-201ENST00000621360 228 ntBASIC3.43□□□□□ -1.86
HTTP42858 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
HTTP42858 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC3.42□□□□□ -1.86
HTTP42858 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.42□□□□□ -1.86
HTTP42858 OR5BR1P-201ENST00000524992 1330 ntBASIC3.42□□□□□ -1.86
HTTP42858 CD2-201ENST00000369477 478 ntTSL 2 BASIC3.42□□□□□ -1.86
HTTP42858 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
HTTP42858 NPM1P28-201ENST00000492269 840 ntBASIC3.42□□□□□ -1.86
HTTP42858 BTG4P1-201ENST00000510421 183 ntBASIC3.42□□□□□ -1.86
HTTP42858 COX6CP8-201ENST00000522620 226 ntBASIC3.42□□□□□ -1.86
HTTP42858 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
HTTP42858 TANC2-202ENST00000424789 11721 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
HTTP42858 CYLD-203ENST00000427738 8503 ntTSL 5 BASIC3.42□□□□□ -1.86
HTTP42858 SULF1-201ENST00000260128 5710 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
HTTP42858 CPS1-204ENST00000451903 4770 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
HTTP42858 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.42□□□□□ -1.86
HTTP42858 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
HTTP42858 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC3.42□□□□□ -1.86
HTTP42858 ADNP-202ENST00000371602 6115 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
HTTP42858 AC007563.3-201ENST00000433233 371 ntBASIC3.42□□□□□ -1.86
HTTP42858 AC008264.1-201ENST00000447612 367 ntBASIC3.42□□□□□ -1.86
HTTP42858 ATP5F1P7-201ENST00000567330 760 ntBASIC3.42□□□□□ -1.86
HTTP42858 AC046144.1-201ENST00000478559 1853 ntBASIC3.42□□□□□ -1.86
HTTP42858 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC3.42□□□□□ -1.86
HTTP42858 OR51C1P-202ENST00000641159 1444 ntBASIC3.42□□□□□ -1.86
HTTP42858 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC3.42□□□□□ -1.86
HTTP42858 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
HTTP42858 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
HTTP42858 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC3.42□□□□□ -1.86
HTTP42858 AL592148.1-201ENST00000413568 445 ntBASIC3.41□□□□□ -1.86
HTTP42858 YWHAQP9-201ENST00000445891 512 ntBASIC3.41□□□□□ -1.86
HTTP42858 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC3.41□□□□□ -1.86
HTTP42858 LINC02374-201ENST00000503637 743 ntTSL 3 BASIC3.41□□□□□ -1.86
HTTP42858 AC114781.4-201ENST00000513707 639 ntBASIC3.41□□□□□ -1.86
HTTP42858 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC3.41□□□□□ -1.86
HTTP42858 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC3.41□□□□□ -1.86
HTTP42858 AC022509.4-201ENST00000621404 572 ntBASIC3.41□□□□□ -1.86
HTTP42858 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
HTTP42858 AC017002.4-201ENST00000604721 1525 ntBASIC3.41□□□□□ -1.86
HTTP42858 ANKRD36BP1-201ENST00000358576 1779 ntBASIC3.41□□□□□ -1.86
HTTP42858 ZNF532-201ENST00000336078 6696 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
HTTP42858 ATP5F1P6-201ENST00000402768 767 ntBASIC3.41□□□□□ -1.86
HTTP42858 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC3.41□□□□□ -1.86
HTTP42858 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC3.41□□□□□ -1.86
HTTP42858 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC3.41□□□□□ -1.86
HTTP42858 OR7A8P-201ENST00000595427 913 ntBASIC3.41□□□□□ -1.86
HTTP42858 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC3.41□□□□□ -1.86
HTTP42858 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
HTTP42858 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
HTTP42858 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.41□□□□□ -1.86
HTTP42858 AC126124.2-201ENST00000413542 321 ntBASIC3.41□□□□□ -1.86
HTTP42858 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC3.41□□□□□ -1.86
HTTP42858 AC097110.1-201ENST00000507344 768 ntTSL 2 BASIC3.41□□□□□ -1.86
HTTP42858 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC3.41□□□□□ -1.86
HTTP42858 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC3.41□□□□□ -1.86
HTTP42858 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC3.41□□□□□ -1.86
HTTP42858 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
HTTP42858 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC3.41□□□□□ -1.86
HTTP42858 ABCB11-201ENST00000263817 4775 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
HTTP42858 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC3.4□□□□□ -1.86
HTTP42858 LINC02471-203ENST00000641941 4752 ntBASIC3.4□□□□□ -1.86
HTTP42858 TEX41-204ENST00000423031 491 ntTSL 4 BASIC3.4□□□□□ -1.86
HTTP42858 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC3.4□□□□□ -1.86
HTTP42858 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC3.4□□□□□ -1.86
HTTP42858 RPSAP41-201ENST00000439695 860 ntBASIC3.4□□□□□ -1.86
HTTP42858 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
HTTP42858 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC3.4□□□□□ -1.86
HTTP42858 RNA5SP24-201ENST00000516478 95 ntBASIC3.4□□□□□ -1.86
HTTP42858 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC3.4□□□□□ -1.86
HTTP42858 AC023394.1-201ENST00000578673 312 ntTSL 5 BASIC3.4□□□□□ -1.86
HTTP42858 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC3.4□□□□□ -1.86
HTTP42858 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
HTTP42858 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
HTTP42858 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.4□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 115 ms