Protein–RNA interactions for Protein: P35221

CTNNA1, Catenin alpha-1, humanhuman

Known RBP Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1P35221 GABPAP-201ENST00000419271 1356 ntBASIC4.32□□□□□ -1.72
CTNNA1P35221 AC106871.1-201ENST00000568324 3102 ntBASIC4.32□□□□□ -1.72
CTNNA1P35221 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
CTNNA1P35221 U6.112-201ENST00000384129 70 ntBASIC4.32□□□□□ -1.72
CTNNA1P35221 MT-TC-201ENST00000387405 66 ntBASIC4.32□□□□□ -1.72
CTNNA1P35221 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CTNNA1P35221 MTCO2P31-201ENST00000402702 684 ntBASIC4.32□□□□□ -1.72
CTNNA1P35221 AL139128.1-201ENST00000413921 941 ntBASIC4.32□□□□□ -1.72
CTNNA1P35221 LIPT1P1-201ENST00000415870 1186 ntBASIC4.32□□□□□ -1.72
CTNNA1P35221 TAF13P2-201ENST00000416876 286 ntBASIC4.32□□□□□ -1.72
CTNNA1P35221 RBMY2KP-201ENST00000418221 992 ntBASIC4.32□□□□□ -1.72
CTNNA1P35221 AL513174.1-201ENST00000423182 629 ntBASIC4.32□□□□□ -1.72
CTNNA1P35221 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC4.32□□□□□ -1.72
CTNNA1P35221 LAMTOR3P1-201ENST00000428620 370 ntBASIC4.32□□□□□ -1.72
CTNNA1P35221 RPS29P17-201ENST00000430795 166 ntBASIC4.32□□□□□ -1.72
CTNNA1P35221 AL512637.2-201ENST00000431287 1256 ntBASIC4.32□□□□□ -1.72
CTNNA1P35221 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CTNNA1P35221 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC4.32□□□□□ -1.72
CTNNA1P35221 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC4.32□□□□□ -1.72
CTNNA1P35221 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC4.32□□□□□ -1.72
CTNNA1P35221 RPL23AP24-201ENST00000458203 385 ntBASIC4.32□□□□□ -1.72
CTNNA1P35221 AF213884.1-201ENST00000488102 463 ntBASIC4.32□□□□□ -1.72
CTNNA1P35221 PDC-202ENST00000497198 1174 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CTNNA1P35221 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC4.32□□□□□ -1.72
CTNNA1P35221 KCTD9P2-201ENST00000512203 1013 ntBASIC4.32□□□□□ -1.72
CTNNA1P35221 RNU7-143P-201ENST00000516781 65 ntBASIC4.32□□□□□ -1.72
CTNNA1P35221 RN7SKP116-201ENST00000516902 319 ntBASIC4.32□□□□□ -1.72
CTNNA1P35221 MTND1P6-201ENST00000523621 946 ntBASIC4.32□□□□□ -1.72
CTNNA1P35221 OR4A45P-201ENST00000529954 901 ntBASIC4.32□□□□□ -1.72
CTNNA1P35221 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC4.32□□□□□ -1.72
CTNNA1P35221 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC4.32□□□□□ -1.72
CTNNA1P35221 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC4.32□□□□□ -1.72
CTNNA1P35221 AC022655.2-201ENST00000577280 318 ntBASIC4.32□□□□□ -1.72
CTNNA1P35221 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC4.32□□□□□ -1.72
CTNNA1P35221 MIR4715-201ENST00000584117 79 ntBASIC4.32□□□□□ -1.72
CTNNA1P35221 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC4.32□□□□□ -1.72
CTNNA1P35221 AC025946.2-201ENST00000603398 234 ntBASIC4.32□□□□□ -1.72
CTNNA1P35221 AC113368.1-201ENST00000603736 382 ntBASIC4.32□□□□□ -1.72
CTNNA1P35221 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC4.32□□□□□ -1.72
CTNNA1P35221 AP003392.5-201ENST00000607857 415 ntBASIC4.32□□□□□ -1.72
CTNNA1P35221 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CTNNA1P35221 MIR486-1-201ENST00000612171 68 ntBASIC4.32□□□□□ -1.72
CTNNA1P35221 AC005156.1-201ENST00000613371 573 ntBASIC4.32□□□□□ -1.72
CTNNA1P35221 AC078880.5-201ENST00000617845 421 ntBASIC4.32□□□□□ -1.72
CTNNA1P35221 AC068722.2-201ENST00000618734 544 ntBASIC4.32□□□□□ -1.72
CTNNA1P35221 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC4.32□□□□□ -1.72
CTNNA1P35221 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CTNNA1P35221 BDP1P-201ENST00000582658 1990 ntBASIC4.32□□□□□ -1.72
CTNNA1P35221 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CTNNA1P35221 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC4.32□□□□□ -1.72
CTNNA1P35221 MFF-206ENST00000392059 1710 ntTSL 5 BASIC4.32□□□□□ -1.72
CTNNA1P35221 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
CTNNA1P35221 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC4.31□□□□□ -1.72
CTNNA1P35221 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
CTNNA1P35221 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC4.31□□□□□ -1.72
CTNNA1P35221 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC4.31□□□□□ -1.72
CTNNA1P35221 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
CTNNA1P35221 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
CTNNA1P35221 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC4.31□□□□□ -1.72
CTNNA1P35221 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
CTNNA1P35221 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
CTNNA1P35221 RNU6-398P-201ENST00000384143 109 ntBASIC4.31□□□□□ -1.72
CTNNA1P35221 RPL22P22-201ENST00000395439 379 ntBASIC4.31□□□□□ -1.72
CTNNA1P35221 ELOCP19-201ENST00000411919 318 ntBASIC4.31□□□□□ -1.72
CTNNA1P35221 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC4.31□□□□□ -1.72
CTNNA1P35221 CYP4F29P-201ENST00000420685 446 ntBASIC4.31□□□□□ -1.72
CTNNA1P35221 AC009237.2-201ENST00000421358 284 ntBASIC4.31□□□□□ -1.72
CTNNA1P35221 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC4.31□□□□□ -1.72
CTNNA1P35221 AC087650.1-201ENST00000431445 468 ntBASIC4.31□□□□□ -1.72
CTNNA1P35221 RPS3AP54-201ENST00000435535 734 ntBASIC4.31□□□□□ -1.72
CTNNA1P35221 AL096829.2-201ENST00000446582 742 ntBASIC4.31□□□□□ -1.72
CTNNA1P35221 RPL7P59-201ENST00000447700 943 ntBASIC4.31□□□□□ -1.72
CTNNA1P35221 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC4.31□□□□□ -1.72
CTNNA1P35221 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC4.31□□□□□ -1.72
CTNNA1P35221 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC4.31□□□□□ -1.72
CTNNA1P35221 RPL31P13-201ENST00000484151 370 ntBASIC4.31□□□□□ -1.72
CTNNA1P35221 HMGB1P38-201ENST00000490557 577 ntBASIC4.31□□□□□ -1.72
CTNNA1P35221 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC4.31□□□□□ -1.72
CTNNA1P35221 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC4.31□□□□□ -1.72
CTNNA1P35221 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC4.31□□□□□ -1.72
CTNNA1P35221 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC4.31□□□□□ -1.72
CTNNA1P35221 AC008802.1-201ENST00000519121 791 ntBASIC4.31□□□□□ -1.72
CTNNA1P35221 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC4.31□□□□□ -1.72
CTNNA1P35221 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC4.31□□□□□ -1.72
CTNNA1P35221 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC4.31□□□□□ -1.72
CTNNA1P35221 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC4.31□□□□□ -1.72
CTNNA1P35221 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC4.31□□□□□ -1.72
CTNNA1P35221 AC005412.1-201ENST00000580812 1049 ntBASIC4.31□□□□□ -1.72
CTNNA1P35221 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC4.31□□□□□ -1.72
CTNNA1P35221 AL161729.3-201ENST00000603533 673 ntBASIC4.31□□□□□ -1.72
CTNNA1P35221 AC114878.2-201ENST00000604863 1251 ntBASIC4.31□□□□□ -1.72
CTNNA1P35221 RPL21P136-201ENST00000605378 396 ntBASIC4.31□□□□□ -1.72
CTNNA1P35221 AL023583.1-201ENST00000607518 1143 ntBASIC4.31□□□□□ -1.72
CTNNA1P35221 AC013468.1-201ENST00000608680 598 ntBASIC4.31□□□□□ -1.72
CTNNA1P35221 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC4.31□□□□□ -1.72
CTNNA1P35221 AC093875.1-201ENST00000623688 504 ntBASIC4.31□□□□□ -1.72
CTNNA1P35221 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC4.31□□□□□ -1.72
CTNNA1P35221 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC4.31□□□□□ -1.72
CTNNA1P35221 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC4.31□□□□□ -1.72
CTNNA1P35221 AL121594.5-201ENST00000631724 573 ntBASIC4.31□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 133.7 ms