Protein–RNA interactions for Protein: P35125

USP6, Ubiquitin carboxyl-terminal hydrolase 6, humanhuman

Predictions only

Length 1,406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6P35125 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
USP6P35125 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC4.56□□□□□ -1.68
USP6P35125 AL031121.1-201ENST00000406553 254 ntBASIC4.56□□□□□ -1.68
USP6P35125 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC4.56□□□□□ -1.68
USP6P35125 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC4.56□□□□□ -1.68
USP6P35125 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC4.56□□□□□ -1.68
USP6P35125 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
USP6P35125 IGKV1OR-3-201ENST00000446944 348 ntBASIC4.56□□□□□ -1.68
USP6P35125 DNAJC19P1-201ENST00000455312 319 ntBASIC4.56□□□□□ -1.68
USP6P35125 LINC02505-203ENST00000515128 756 ntTSL 5 BASIC4.56□□□□□ -1.68
USP6P35125 RNA5SP341-201ENST00000516261 117 ntBASIC4.56□□□□□ -1.68
USP6P35125 APAF1-207ENST00000547743 651 ntTSL 3 BASIC4.56□□□□□ -1.68
USP6P35125 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC4.56□□□□□ -1.68
USP6P35125 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC4.56□□□□□ -1.68
USP6P35125 AC018555.1-201ENST00000567548 1980 ntBASIC4.56□□□□□ -1.68
USP6P35125 OR1AB1P-201ENST00000585564 761 ntBASIC4.56□□□□□ -1.68
USP6P35125 AC233280.2-201ENST00000603917 1070 ntBASIC4.56□□□□□ -1.68
USP6P35125 AL162274.2-201ENST00000614406 332 ntBASIC4.56□□□□□ -1.68
USP6P35125 OR10AB1P-202ENST00000641219 1686 ntBASIC4.56□□□□□ -1.68
USP6P35125 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC4.56□□□□□ -1.68
USP6P35125 CPD-202ENST00000543464 4007 ntTSL 2 BASIC4.56□□□□□ -1.68
USP6P35125 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
USP6P35125 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
USP6P35125 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC4.56□□□□□ -1.68
USP6P35125 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
USP6P35125 CDC27P2-201ENST00000425026 1922 ntBASIC4.56□□□□□ -1.68
USP6P35125 ZNF807-201ENST00000328088 1707 ntBASIC4.56□□□□□ -1.68
USP6P35125 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
USP6P35125 KPNA2P2-201ENST00000419546 1489 ntBASIC4.56□□□□□ -1.68
USP6P35125 SNORA80A-201ENST00000363922 136 ntBASIC4.55□□□□□ -1.68
USP6P35125 RNU4-47P-201ENST00000410876 114 ntBASIC4.55□□□□□ -1.68
USP6P35125 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC4.55□□□□□ -1.68
USP6P35125 COTL1P1-201ENST00000422309 375 ntBASIC4.55□□□□□ -1.68
USP6P35125 AL392003.1-201ENST00000434394 243 ntBASIC4.55□□□□□ -1.68
USP6P35125 RAB28P3-201ENST00000448325 597 ntBASIC4.55□□□□□ -1.68
USP6P35125 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC4.55□□□□□ -1.68
USP6P35125 AC005229.2-201ENST00000456995 399 ntBASIC4.55□□□□□ -1.68
USP6P35125 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC4.55□□□□□ -1.68
USP6P35125 AC037198.2-201ENST00000478845 733 ntBASIC4.55□□□□□ -1.68
USP6P35125 RN7SL429P-201ENST00000479090 223 ntBASIC4.55□□□□□ -1.68
USP6P35125 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC4.55□□□□□ -1.68
USP6P35125 RN7SL489P-201ENST00000486185 223 ntBASIC4.55□□□□□ -1.68
USP6P35125 RN7SL327P-201ENST00000488659 223 ntBASIC4.55□□□□□ -1.68
USP6P35125 RPL23AP73-201ENST00000492507 471 ntBASIC4.55□□□□□ -1.68
USP6P35125 AC097462.2-201ENST00000504623 481 ntBASIC4.55□□□□□ -1.68
USP6P35125 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC4.55□□□□□ -1.68
USP6P35125 AC018442.3-201ENST00000523025 183 ntBASIC4.55□□□□□ -1.68
USP6P35125 AC008126.1-201ENST00000549019 480 ntBASIC4.55□□□□□ -1.68
USP6P35125 PSMG2-204ENST00000585331 983 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
USP6P35125 BX322635.1-201ENST00000605804 496 ntBASIC4.55□□□□□ -1.68
USP6P35125 RN7SL853P-201ENST00000617250 223 ntBASIC4.55□□□□□ -1.68
USP6P35125 FAM49B-230ENST00000639004 837 ntTSL 5 BASIC4.55□□□□□ -1.68
USP6P35125 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
USP6P35125 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.55□□□□□ -1.68
USP6P35125 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
USP6P35125 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC4.55□□□□□ -1.68
USP6P35125 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.55□□□□□ -1.68
USP6P35125 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
USP6P35125 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
USP6P35125 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
USP6P35125 CROT-204ENST00000442291 1993 ntTSL 5 BASIC4.55□□□□□ -1.68
USP6P35125 OR13C3-201ENST00000374781 1108 ntBASIC4.55□□□□□ -1.68
USP6P35125 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC4.55□□□□□ -1.68
USP6P35125 RNA5SP229-201ENST00000410809 99 ntBASIC4.55□□□□□ -1.68
USP6P35125 AC234781.4-201ENST00000419384 244 ntBASIC4.55□□□□□ -1.68
USP6P35125 AC080014.1-201ENST00000496877 1201 ntBASIC4.55□□□□□ -1.68
USP6P35125 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC4.55□□□□□ -1.68
USP6P35125 APOOP4-201ENST00000513530 597 ntBASIC4.55□□□□□ -1.68
USP6P35125 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC4.55□□□□□ -1.68
USP6P35125 AC004024.1-201ENST00000549244 247 ntBASIC4.55□□□□□ -1.68
USP6P35125 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC4.55□□□□□ -1.68
USP6P35125 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
USP6P35125 AC006504.3-201ENST00000586818 523 ntBASIC4.55□□□□□ -1.68
USP6P35125 AC006539.2-201ENST00000601729 572 ntBASIC4.55□□□□□ -1.68
USP6P35125 AC107308.1-201ENST00000615897 301 ntBASIC4.55□□□□□ -1.68
USP6P35125 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC4.55□□□□□ -1.68
USP6P35125 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
USP6P35125 NCAPGP1-201ENST00000505112 1814 ntBASIC4.54□□□□□ -1.68
USP6P35125 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
USP6P35125 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC4.54□□□□□ -1.68
USP6P35125 AC233263.6-201ENST00000631132 1963 ntBASIC4.54□□□□□ -1.68
USP6P35125 CNOT6LP1-201ENST00000559681 1462 ntBASIC4.54□□□□□ -1.68
USP6P35125 OR5T1-202ENST00000641665 1471 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
USP6P35125 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC4.54□□□□□ -1.68
USP6P35125 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC4.54□□□□□ -1.68
USP6P35125 ERMN-204ENST00000409925 556 ntTSL 4 BASIC4.54□□□□□ -1.68
USP6P35125 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC4.54□□□□□ -1.68
USP6P35125 RPS3AP50-201ENST00000487064 803 ntBASIC4.54□□□□□ -1.68
USP6P35125 OR9N1P-201ENST00000491296 333 ntBASIC4.54□□□□□ -1.68
USP6P35125 PRELID3BP6-201ENST00000503839 571 ntBASIC4.54□□□□□ -1.68
USP6P35125 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC4.54□□□□□ -1.68
USP6P35125 AC117525.1-201ENST00000515228 503 ntBASIC4.54□□□□□ -1.68
USP6P35125 RNU6-362P-201ENST00000516736 90 ntBASIC4.54□□□□□ -1.68
USP6P35125 SEC11B-201ENST00000518383 499 ntBASIC4.54□□□□□ -1.68
USP6P35125 SNHG1-205ENST00000537869 1038 ntTSL 3 BASIC4.54□□□□□ -1.68
USP6P35125 AL033523.1-201ENST00000605153 153 ntBASIC4.54□□□□□ -1.68
USP6P35125 AC100814.1-201ENST00000606963 623 ntBASIC4.54□□□□□ -1.68
USP6P35125 AL592494.3-201ENST00000609485 464 ntBASIC4.54□□□□□ -1.68
USP6P35125 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC4.54□□□□□ -1.68
USP6P35125 RNVU1-4-201ENST00000612985 164 ntBASIC4.54□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms