Protein–RNA interactions for Protein: P34897

SHMT2, Serine hydroxymethyltransferase, mitochondrial, humanhuman

Predictions only

Length 504 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2P34897 AL121594.4-201ENST00000556211 1196 ntBASIC3.69□□□□□ -1.82
SHMT2P34897 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC3.69□□□□□ -1.82
SHMT2P34897 AC090877.1-201ENST00000561418 344 ntBASIC3.69□□□□□ -1.82
SHMT2P34897 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC3.69□□□□□ -1.82
SHMT2P34897 AC135178.3-202ENST00000580537 579 ntTSL 3 BASIC3.69□□□□□ -1.82
SHMT2P34897 AL109618.2-201ENST00000605527 211 ntBASIC3.69□□□□□ -1.82
SHMT2P34897 AC123768.4-201ENST00000616244 701 ntBASIC3.69□□□□□ -1.82
SHMT2P34897 AC034229.5-201ENST00000624258 185 ntBASIC3.69□□□□□ -1.82
SHMT2P34897 AP003072.4-201ENST00000624580 310 ntBASIC3.69□□□□□ -1.82
SHMT2P34897 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC3.69□□□□□ -1.82
SHMT2P34897 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.69□□□□□ -1.82
SHMT2P34897 AC097512.1-201ENST00000511453 1309 ntTSL 3 BASIC3.69□□□□□ -1.82
SHMT2P34897 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.68□□□□□ -1.82
SHMT2P34897 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
SHMT2P34897 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC3.68□□□□□ -1.82
SHMT2P34897 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
SHMT2P34897 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
SHMT2P34897 METTL21EP-201ENST00000298105 713 ntBASIC3.68□□□□□ -1.82
SHMT2P34897 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
SHMT2P34897 CGA-201ENST00000369582 729 ntTSL 5 BASIC3.68□□□□□ -1.82
SHMT2P34897 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC3.68□□□□□ -1.82
SHMT2P34897 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC3.68□□□□□ -1.82
SHMT2P34897 RNU6-98P-201ENST00000384173 107 ntBASIC3.68□□□□□ -1.82
SHMT2P34897 HLFP1-201ENST00000402375 499 ntBASIC3.68□□□□□ -1.82
SHMT2P34897 RN7SKP177-201ENST00000410567 355 ntBASIC3.68□□□□□ -1.82
SHMT2P34897 LINC01752-201ENST00000417299 438 ntTSL 2 BASIC3.68□□□□□ -1.82
SHMT2P34897 TEX41-203ENST00000420472 765 ntTSL 3 BASIC3.68□□□□□ -1.82
SHMT2P34897 AL139247.1-201ENST00000422768 325 ntBASIC3.68□□□□□ -1.82
SHMT2P34897 FO393419.3-201ENST00000428741 282 ntBASIC3.68□□□□□ -1.82
SHMT2P34897 AC007389.2-201ENST00000434630 306 ntBASIC3.68□□□□□ -1.82
SHMT2P34897 LINC00972-202ENST00000438065 788 ntTSL 3 BASIC3.68□□□□□ -1.82
SHMT2P34897 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
SHMT2P34897 AC097499.1-201ENST00000444277 208 ntBASIC3.68□□□□□ -1.82
SHMT2P34897 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
SHMT2P34897 AC098824.1-201ENST00000453565 980 ntBASIC3.68□□□□□ -1.82
SHMT2P34897 AC084198.1-201ENST00000477747 402 ntBASIC3.68□□□□□ -1.82
SHMT2P34897 NPM1P17-201ENST00000479221 602 ntBASIC3.68□□□□□ -1.82
SHMT2P34897 CD200R1-205ENST00000490004 778 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
SHMT2P34897 LINC02430-201ENST00000504755 476 ntTSL 3 BASIC3.68□□□□□ -1.82
SHMT2P34897 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC3.68□□□□□ -1.82
SHMT2P34897 COL6A4P2-205ENST00000509855 506 ntBASIC3.68□□□□□ -1.82
SHMT2P34897 AC021146.1-201ENST00000511202 716 ntBASIC3.68□□□□□ -1.82
SHMT2P34897 AC093853.1-201ENST00000515689 483 ntBASIC3.68□□□□□ -1.82
SHMT2P34897 SCARNA14-201ENST00000516903 136 ntBASIC3.68□□□□□ -1.82
SHMT2P34897 MTCO1P49-201ENST00000523429 802 ntBASIC3.68□□□□□ -1.82
SHMT2P34897 CIR1P1-201ENST00000524055 1133 ntBASIC3.68□□□□□ -1.82
SHMT2P34897 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC3.68□□□□□ -1.82
SHMT2P34897 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC3.68□□□□□ -1.82
SHMT2P34897 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC3.68□□□□□ -1.82
SHMT2P34897 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC3.68□□□□□ -1.82
SHMT2P34897 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC3.68□□□□□ -1.82
SHMT2P34897 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC3.68□□□□□ -1.82
SHMT2P34897 AL121576.1-201ENST00000556055 276 ntBASIC3.68□□□□□ -1.82
SHMT2P34897 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC3.68□□□□□ -1.82
SHMT2P34897 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC3.68□□□□□ -1.82
SHMT2P34897 AC083899.3-201ENST00000603413 594 ntBASIC3.68□□□□□ -1.82
SHMT2P34897 AL390816.3-201ENST00000604527 1066 ntBASIC3.68□□□□□ -1.82
SHMT2P34897 AL137849.1-201ENST00000604767 169 ntBASIC3.68□□□□□ -1.82
SHMT2P34897 BRDTP1-201ENST00000605735 677 ntBASIC3.68□□□□□ -1.82
SHMT2P34897 AC009318.3-201ENST00000616916 503 ntBASIC3.68□□□□□ -1.82
SHMT2P34897 AP006248.3-201ENST00000623580 594 ntBASIC3.68□□□□□ -1.82
SHMT2P34897 AC090229.1-201ENST00000590983 1609 ntBASIC3.68□□□□□ -1.82
SHMT2P34897 AL161912.2-201ENST00000565707 3007 ntBASIC3.68□□□□□ -1.82
SHMT2P34897 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.68□□□□□ -1.82
SHMT2P34897 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
SHMT2P34897 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
SHMT2P34897 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
SHMT2P34897 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.82
SHMT2P34897 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.68□□□□□ -1.82
SHMT2P34897 AC024560.2-201ENST00000507981 1497 ntBASIC3.67□□□□□ -1.82
SHMT2P34897 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC3.67□□□□□ -1.82
SHMT2P34897 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC3.67□□□□□ -1.82
SHMT2P34897 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
SHMT2P34897 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
SHMT2P34897 HMGB1P13-201ENST00000406019 642 ntBASIC3.67□□□□□ -1.82
SHMT2P34897 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC3.67□□□□□ -1.82
SHMT2P34897 AC073069.1-201ENST00000428657 441 ntBASIC3.67□□□□□ -1.82
SHMT2P34897 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC3.67□□□□□ -1.82
SHMT2P34897 SKP1P1-201ENST00000438081 489 ntBASIC3.67□□□□□ -1.82
SHMT2P34897 AL353093.1-201ENST00000441292 436 ntBASIC3.67□□□□□ -1.82
SHMT2P34897 MTCYBP21-201ENST00000443300 1113 ntBASIC3.67□□□□□ -1.82
SHMT2P34897 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC3.67□□□□□ -1.82
SHMT2P34897 AL133162.1-201ENST00000463228 453 ntBASIC3.67□□□□□ -1.82
SHMT2P34897 AC006511.1-201ENST00000470614 315 ntBASIC3.67□□□□□ -1.82
SHMT2P34897 RPL23AP73-201ENST00000492507 471 ntBASIC3.67□□□□□ -1.82
SHMT2P34897 PDC-202ENST00000497198 1174 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
SHMT2P34897 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC3.67□□□□□ -1.82
SHMT2P34897 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC3.67□□□□□ -1.82
SHMT2P34897 OR8K2P-201ENST00000524645 927 ntBASIC3.67□□□□□ -1.82
SHMT2P34897 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
SHMT2P34897 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC3.67□□□□□ -1.82
SHMT2P34897 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC3.67□□□□□ -1.82
SHMT2P34897 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC3.67□□□□□ -1.82
SHMT2P34897 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC3.67□□□□□ -1.82
SHMT2P34897 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC3.67□□□□□ -1.82
SHMT2P34897 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC3.67□□□□□ -1.82
SHMT2P34897 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.67□□□□□ -1.82
SHMT2P34897 MIR4644-201ENST00000579929 84 ntBASIC3.67□□□□□ -1.82
SHMT2P34897 MIR5187-201ENST00000583479 76 ntBASIC3.67□□□□□ -1.82
SHMT2P34897 AC006130.2-201ENST00000586202 326 ntBASIC3.67□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 94.7 ms