Protein–RNA interactions for Protein: P31415

CASQ1, Calsequestrin-1, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASQ1P31415 RN7SL177P-201ENST00000476596 299 ntBASIC3.95□□□□□ -1.78
CASQ1P31415 HMGB3P14-201ENST00000494195 599 ntBASIC3.95□□□□□ -1.78
CASQ1P31415 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC3.95□□□□□ -1.78
CASQ1P31415 AC022695.1-201ENST00000522089 237 ntBASIC3.95□□□□□ -1.78
CASQ1P31415 AF279873.1-201ENST00000523393 313 ntBASIC3.95□□□□□ -1.78
CASQ1P31415 MTCO1P49-201ENST00000523429 802 ntBASIC3.95□□□□□ -1.78
CASQ1P31415 AC068768.1-204ENST00000544890 796 ntTSL 4 BASIC3.95□□□□□ -1.78
CASQ1P31415 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC3.95□□□□□ -1.78
CASQ1P31415 MIR4715-201ENST00000584117 79 ntBASIC3.95□□□□□ -1.78
CASQ1P31415 ZNF836-203ENST00000597065 808 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
CASQ1P31415 BNIP3P38-201ENST00000601117 544 ntBASIC3.95□□□□□ -1.78
CASQ1P31415 SDR42E1P1-201ENST00000611327 477 ntBASIC3.95□□□□□ -1.78
CASQ1P31415 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
CASQ1P31415 MTND5P27-201ENST00000428871 1720 ntBASIC3.95□□□□□ -1.78
CASQ1P31415 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC3.95□□□□□ -1.78
CASQ1P31415 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
CASQ1P31415 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
CASQ1P31415 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
CASQ1P31415 AC058791.1-201ENST00000608412 3198 ntBASIC3.94□□□□□ -1.78
CASQ1P31415 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
CASQ1P31415 OR2B6-201ENST00000244623 942 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
CASQ1P31415 RNA5SP97-201ENST00000365006 84 ntBASIC3.94□□□□□ -1.78
CASQ1P31415 RNU6-805P-201ENST00000365643 106 ntBASIC3.94□□□□□ -1.78
CASQ1P31415 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
CASQ1P31415 AP002088.1-201ENST00000382740 395 ntBASIC3.94□□□□□ -1.78
CASQ1P31415 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
CASQ1P31415 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.94□□□□□ -1.78
CASQ1P31415 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC3.94□□□□□ -1.78
CASQ1P31415 RPL21P66-201ENST00000426566 466 ntBASIC3.94□□□□□ -1.78
CASQ1P31415 AL691449.1-201ENST00000426570 421 ntBASIC3.94□□□□□ -1.78
CASQ1P31415 RPS3AP46-201ENST00000448352 682 ntBASIC3.94□□□□□ -1.78
CASQ1P31415 AC020893.1-201ENST00000502452 580 ntBASIC3.94□□□□□ -1.78
CASQ1P31415 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
CASQ1P31415 AC138701.1-201ENST00000524329 714 ntBASIC3.94□□□□□ -1.78
CASQ1P31415 OR4V1P-201ENST00000525394 1140 ntBASIC3.94□□□□□ -1.78
CASQ1P31415 AP001636.2-201ENST00000525517 696 ntBASIC3.94□□□□□ -1.78
CASQ1P31415 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC3.94□□□□□ -1.78
CASQ1P31415 NACA-211ENST00000548563 827 ntTSL 5 BASIC3.94□□□□□ -1.78
CASQ1P31415 TRAV37-201ENST00000553906 342 ntBASIC3.94□□□□□ -1.78
CASQ1P31415 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC3.94□□□□□ -1.78
CASQ1P31415 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.94□□□□□ -1.78
CASQ1P31415 AC044860.2-201ENST00000561005 179 ntBASIC3.94□□□□□ -1.78
CASQ1P31415 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC3.94□□□□□ -1.78
CASQ1P31415 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC3.94□□□□□ -1.78
CASQ1P31415 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.94□□□□□ -1.78
CASQ1P31415 MIR3653-201ENST00000625572 110 ntBASIC3.94□□□□□ -1.78
CASQ1P31415 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC3.94□□□□□ -1.78
CASQ1P31415 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC3.94□□□□□ -1.78
CASQ1P31415 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
CASQ1P31415 AC011978.2-201ENST00000569835 2054 ntBASIC3.94□□□□□ -1.78
CASQ1P31415 AC007496.3-201ENST00000624987 3443 ntBASIC3.94□□□□□ -1.78
CASQ1P31415 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.94□□□□□ -1.78
CASQ1P31415 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
CASQ1P31415 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
CASQ1P31415 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
CASQ1P31415 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC3.93□□□□□ -1.78
CASQ1P31415 OR4A15-201ENST00000314706 1035 ntBASIC3.93□□□□□ -1.78
CASQ1P31415 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.93□□□□□ -1.78
CASQ1P31415 AC016397.1-201ENST00000412463 242 ntBASIC3.93□□□□□ -1.78
CASQ1P31415 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC3.93□□□□□ -1.78
CASQ1P31415 AL590762.4-201ENST00000425885 253 ntBASIC3.93□□□□□ -1.78
CASQ1P31415 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC3.93□□□□□ -1.78
CASQ1P31415 BX679664.1-201ENST00000434429 253 ntBASIC3.93□□□□□ -1.78
CASQ1P31415 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC3.93□□□□□ -1.78
CASQ1P31415 AC011276.1-201ENST00000469688 323 ntBASIC3.93□□□□□ -1.78
CASQ1P31415 AC007688.1-201ENST00000475592 759 ntBASIC3.93□□□□□ -1.78
CASQ1P31415 AC013356.1-201ENST00000489027 564 ntBASIC3.93□□□□□ -1.78
CASQ1P31415 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC3.93□□□□□ -1.78
CASQ1P31415 LINC02234-202ENST00000513288 705 ntTSL 5 BASIC3.93□□□□□ -1.78
CASQ1P31415 MTCO2P32-201ENST00000514865 403 ntBASIC3.93□□□□□ -1.78
CASQ1P31415 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC3.93□□□□□ -1.78
CASQ1P31415 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC3.93□□□□□ -1.78
CASQ1P31415 AL451074.6-201ENST00000608512 729 ntBASIC3.93□□□□□ -1.78
CASQ1P31415 AC107068.2-201ENST00000634611 447 ntTSL 2 BASIC3.93□□□□□ -1.78
CASQ1P31415 AC087521.4-201ENST00000637427 289 ntTSL 5 BASIC3.93□□□□□ -1.78
CASQ1P31415 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
CASQ1P31415 AC073429.2-201ENST00000569694 1444 ntBASIC3.93□□□□□ -1.78
CASQ1P31415 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC3.93□□□□□ -1.78
CASQ1P31415 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
CASQ1P31415 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
CASQ1P31415 AC002546.1-201ENST00000588041 2504 ntBASIC3.92□□□□□ -1.78
CASQ1P31415 CASC19-261ENST00000641853 1638 ntBASIC3.92□□□□□ -1.78
CASQ1P31415 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
CASQ1P31415 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.92□□□□□ -1.78
CASQ1P31415 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
CASQ1P31415 AP001350.1-201ENST00000601906 1524 ntBASIC3.92□□□□□ -1.78
CASQ1P31415 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC3.92□□□□□ -1.78
CASQ1P31415 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC3.92□□□□□ -1.78
CASQ1P31415 BTBD10P2-201ENST00000404779 676 ntBASIC3.92□□□□□ -1.78
CASQ1P31415 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC3.92□□□□□ -1.78
CASQ1P31415 RNU2-65P-201ENST00000410162 185 ntBASIC3.92□□□□□ -1.78
CASQ1P31415 RNU4-6P-201ENST00000410804 122 ntBASIC3.92□□□□□ -1.78
CASQ1P31415 CNOT7P1-201ENST00000429006 852 ntBASIC3.92□□□□□ -1.78
CASQ1P31415 MRPS18BP2-201ENST00000434310 759 ntBASIC3.92□□□□□ -1.78
CASQ1P31415 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
CASQ1P31415 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC3.92□□□□□ -1.78
CASQ1P31415 AL356276.2-201ENST00000435919 558 ntBASIC3.92□□□□□ -1.78
CASQ1P31415 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC3.92□□□□□ -1.78
CASQ1P31415 ATP6V0E1P2-201ENST00000441771 245 ntBASIC3.92□□□□□ -1.78
CASQ1P31415 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC3.92□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 95 ms