Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC5.55□□□□□ -1.52
TOP2AP11388 MIR4738-201ENST00000579134 87 ntBASIC5.55□□□□□ -1.52
TOP2AP11388 AC096644.4-201ENST00000563417 2912 ntBASIC5.55□□□□□ -1.52
TOP2AP11388 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
TOP2AP11388 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
TOP2AP11388 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
TOP2AP11388 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
TOP2AP11388 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
TOP2AP11388 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
TOP2AP11388 SNORA5B-201ENST00000363786 132 ntBASIC5.54□□□□□ -1.52
TOP2AP11388 NPM1P38-201ENST00000403835 865 ntBASIC5.54□□□□□ -1.52
TOP2AP11388 AL513174.1-201ENST00000423182 629 ntBASIC5.54□□□□□ -1.52
TOP2AP11388 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC5.54□□□□□ -1.52
TOP2AP11388 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC5.54□□□□□ -1.52
TOP2AP11388 AC135001.1-201ENST00000544546 283 ntBASIC5.54□□□□□ -1.52
TOP2AP11388 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC5.54□□□□□ -1.52
TOP2AP11388 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC5.54□□□□□ -1.52
TOP2AP11388 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
TOP2AP11388 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC5.54□□□□□ -1.52
TOP2AP11388 DDX4-211ENST00000511853 1984 ntTSL 2 BASIC5.54□□□□□ -1.52
TOP2AP11388 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC5.54□□□□□ -1.52
TOP2AP11388 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
TOP2AP11388 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
TOP2AP11388 Z99127.3-201ENST00000448158 395 ntBASIC5.53□□□□□ -1.52
TOP2AP11388 AC004924.1-201ENST00000480160 781 ntBASIC5.53□□□□□ -1.52
TOP2AP11388 IL7R-208ENST00000511982 612 ntTSL 2 BASIC5.53□□□□□ -1.52
TOP2AP11388 GTF3AP2-201ENST00000557014 266 ntBASIC5.53□□□□□ -1.52
TOP2AP11388 AC006272.2-201ENST00000594725 163 ntBASIC5.53□□□□□ -1.52
TOP2AP11388 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC5.53□□□□□ -1.52
TOP2AP11388 PRELID3BP8-201ENST00000604148 295 ntBASIC5.53□□□□□ -1.52
TOP2AP11388 uc_338.32-201ENST00000615087 172 ntBASIC5.53□□□□□ -1.52
TOP2AP11388 ALG13-230ENST00000623189 458 ntTSL 3 BASIC5.53□□□□□ -1.52
TOP2AP11388 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
TOP2AP11388 AL022311.1-201ENST00000623726 19416 ntBASIC5.53□□□□□ -1.52
TOP2AP11388 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC5.53□□□□□ -1.52
TOP2AP11388 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC5.53□□□□□ -1.52
TOP2AP11388 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC5.53□□□□□ -1.52
TOP2AP11388 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC5.53□□□□□ -1.52
TOP2AP11388 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC5.53□□□□□ -1.52
TOP2AP11388 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
TOP2AP11388 RPL7P8-201ENST00000411964 730 ntBASIC5.53□□□□□ -1.52
TOP2AP11388 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC5.53□□□□□ -1.52
TOP2AP11388 RN7SL429P-201ENST00000479090 223 ntBASIC5.53□□□□□ -1.52
TOP2AP11388 RN7SL489P-201ENST00000486185 223 ntBASIC5.53□□□□□ -1.52
TOP2AP11388 RN7SL327P-201ENST00000488659 223 ntBASIC5.53□□□□□ -1.52
TOP2AP11388 VN1R104P-201ENST00000505115 1009 ntBASIC5.53□□□□□ -1.52
TOP2AP11388 AC023389.2-201ENST00000580031 955 ntBASIC5.53□□□□□ -1.52
TOP2AP11388 RN7SL853P-201ENST00000617250 223 ntBASIC5.53□□□□□ -1.52
TOP2AP11388 AL713922.2-201ENST00000619384 716 ntBASIC5.53□□□□□ -1.52
TOP2AP11388 AC099506.2-201ENST00000623074 221 ntBASIC5.53□□□□□ -1.52
TOP2AP11388 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC5.53□□□□□ -1.52
TOP2AP11388 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
TOP2AP11388 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC5.52□□□□□ -1.53
TOP2AP11388 AL451142.2-201ENST00000429076 2090 ntBASIC5.52□□□□□ -1.53
TOP2AP11388 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC5.52□□□□□ -1.53
TOP2AP11388 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC5.52□□□□□ -1.53
TOP2AP11388 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
TOP2AP11388 AC018529.3-201ENST00000624212 2254 ntBASIC5.52□□□□□ -1.53
TOP2AP11388 EEF1A1P41-201ENST00000414667 207 ntBASIC5.52□□□□□ -1.53
TOP2AP11388 TRBV24OR9-2-201ENST00000416632 435 ntBASIC5.52□□□□□ -1.53
TOP2AP11388 ASNSP4-201ENST00000511103 447 ntBASIC5.52□□□□□ -1.53
TOP2AP11388 H3F3AP1-201ENST00000559984 334 ntBASIC5.52□□□□□ -1.53
TOP2AP11388 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC5.52□□□□□ -1.53
TOP2AP11388 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
TOP2AP11388 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
TOP2AP11388 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC5.52□□□□□ -1.53
TOP2AP11388 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
TOP2AP11388 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC5.51□□□□□ -1.53
TOP2AP11388 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
TOP2AP11388 SETP5-201ENST00000437270 562 ntBASIC5.51□□□□□ -1.53
TOP2AP11388 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC5.51□□□□□ -1.53
TOP2AP11388 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC5.51□□□□□ -1.53
TOP2AP11388 PRELID3BP6-201ENST00000503839 571 ntBASIC5.51□□□□□ -1.53
TOP2AP11388 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC5.51□□□□□ -1.53
TOP2AP11388 AC107294.1-201ENST00000609524 467 ntBASIC5.51□□□□□ -1.53
TOP2AP11388 AC244205.2-202ENST00000635781 342 ntBASIC5.51□□□□□ -1.53
TOP2AP11388 FAM49B-230ENST00000639004 837 ntTSL 5 BASIC5.51□□□□□ -1.53
TOP2AP11388 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC5.51□□□□□ -1.53
TOP2AP11388 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
TOP2AP11388 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC5.51□□□□□ -1.53
TOP2AP11388 KPNA2P2-201ENST00000419546 1489 ntBASIC5.51□□□□□ -1.53
TOP2AP11388 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC5.51□□□□□ -1.53
TOP2AP11388 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC5.51□□□□□ -1.53
TOP2AP11388 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC5.5□□□□□ -1.53
TOP2AP11388 SNORA48.8-201ENST00000391324 134 ntBASIC5.5□□□□□ -1.53
TOP2AP11388 AL121834.1-202ENST00000404494 277 ntBASIC5.5□□□□□ -1.53
TOP2AP11388 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
TOP2AP11388 KC877373.1-201ENST00000479066 408 ntBASIC5.5□□□□□ -1.53
TOP2AP11388 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC5.5□□□□□ -1.53
TOP2AP11388 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC5.5□□□□□ -1.53
TOP2AP11388 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC5.5□□□□□ -1.53
TOP2AP11388 AL137790.1-201ENST00000634283 177 ntBASIC5.5□□□□□ -1.53
TOP2AP11388 AC007496.3-201ENST00000624987 3443 ntBASIC5.5□□□□□ -1.53
TOP2AP11388 C4orf33-202ENST00000425929 1588 ntAPPRIS P1 TSL 2 BASIC5.5□□□□□ -1.53
TOP2AP11388 AC019072.1-201ENST00000604535 1551 ntBASIC5.5□□□□□ -1.53
TOP2AP11388 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC5.5□□□□□ -1.53
TOP2AP11388 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
TOP2AP11388 SNORA71.1-201ENST00000364523 117 ntBASIC5.49□□□□□ -1.53
TOP2AP11388 OFD1P11Y-201ENST00000418213 1177 ntBASIC5.49□□□□□ -1.53
TOP2AP11388 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC5.49□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 75.7 ms