Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 VN1R34P-201ENST00000447387 883 ntBASIC4.31□□□□□ -1.72
TOP1P11387 USP9YP32-201ENST00000452432 430 ntBASIC4.31□□□□□ -1.72
TOP1P11387 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
TOP1P11387 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC4.31□□□□□ -1.72
TOP1P11387 SNX5P1-201ENST00000505757 1041 ntBASIC4.31□□□□□ -1.72
TOP1P11387 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC4.31□□□□□ -1.72
TOP1P11387 RN7SKP18-201ENST00000516005 275 ntBASIC4.31□□□□□ -1.72
TOP1P11387 Vault.1-201ENST00000516474 102 ntBASIC4.31□□□□□ -1.72
TOP1P11387 AC008676.3-201ENST00000521237 435 ntBASIC4.31□□□□□ -1.72
TOP1P11387 AC008011.1-201ENST00000545989 227 ntBASIC4.31□□□□□ -1.72
TOP1P11387 AL121766.1-201ENST00000547436 487 ntBASIC4.31□□□□□ -1.72
TOP1P11387 CBX3P5-201ENST00000552017 521 ntBASIC4.31□□□□□ -1.72
TOP1P11387 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC4.31□□□□□ -1.72
TOP1P11387 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC4.31□□□□□ -1.72
TOP1P11387 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC4.31□□□□□ -1.72
TOP1P11387 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC4.31□□□□□ -1.72
TOP1P11387 AC119674.1-207ENST00000641355 633 ntBASIC4.31□□□□□ -1.72
TOP1P11387 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
TOP1P11387 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
TOP1P11387 CR381670.1-201ENST00000624291 1693 ntBASIC4.31□□□□□ -1.72
TOP1P11387 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC4.31□□□□□ -1.72
TOP1P11387 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC4.3□□□□□ -1.72
TOP1P11387 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
TOP1P11387 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
TOP1P11387 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
TOP1P11387 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC4.3□□□□□ -1.72
TOP1P11387 MIR449B-201ENST00000384995 97 ntBASIC4.3□□□□□ -1.72
TOP1P11387 MIR670-201ENST00000390142 98 ntBASIC4.3□□□□□ -1.72
TOP1P11387 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
TOP1P11387 AL590290.1-201ENST00000405336 380 ntBASIC4.3□□□□□ -1.72
TOP1P11387 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC4.3□□□□□ -1.72
TOP1P11387 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC4.3□□□□□ -1.72
TOP1P11387 AL365396.1-201ENST00000430854 671 ntBASIC4.3□□□□□ -1.72
TOP1P11387 AC091286.1-201ENST00000431233 461 ntBASIC4.3□□□□□ -1.72
TOP1P11387 AC245517.2-201ENST00000442890 346 ntBASIC4.3□□□□□ -1.72
TOP1P11387 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC4.3□□□□□ -1.72
TOP1P11387 MTCO3P16-201ENST00000454456 754 ntBASIC4.3□□□□□ -1.72
TOP1P11387 AP000873.1-201ENST00000463987 400 ntBASIC4.3□□□□□ -1.72
TOP1P11387 PDLIM1P4-201ENST00000504327 1006 ntBASIC4.3□□□□□ -1.72
TOP1P11387 AC104619.4-201ENST00000510773 249 ntBASIC4.3□□□□□ -1.72
TOP1P11387 NSMCE2-206ENST00000519010 848 ntTSL 2 BASIC4.3□□□□□ -1.72
TOP1P11387 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC4.3□□□□□ -1.72
TOP1P11387 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC4.3□□□□□ -1.72
TOP1P11387 AC009137.2-201ENST00000568179 641 ntTSL 3 BASIC4.3□□□□□ -1.72
TOP1P11387 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
TOP1P11387 AC004160.1-210ENST00000599875 689 ntTSL 5 BASIC4.3□□□□□ -1.72
TOP1P11387 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
TOP1P11387 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
TOP1P11387 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
TOP1P11387 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC4.3□□□□□ -1.72
TOP1P11387 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC4.3□□□□□ -1.72
TOP1P11387 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
TOP1P11387 AC106871.1-201ENST00000568324 3102 ntBASIC4.3□□□□□ -1.72
TOP1P11387 CD36-221ENST00000534394 1741 ntTSL 2 BASIC4.29□□□□□ -1.72
TOP1P11387 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
TOP1P11387 MTND4P10-201ENST00000446199 1363 ntBASIC4.29□□□□□ -1.72
TOP1P11387 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC4.29□□□□□ -1.72
TOP1P11387 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
TOP1P11387 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
TOP1P11387 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
TOP1P11387 MIR423-201ENST00000362201 94 ntBASIC4.29□□□□□ -1.72
TOP1P11387 5S_rRNA.1-201ENST00000364415 116 ntBASIC4.29□□□□□ -1.72
TOP1P11387 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
TOP1P11387 RPS20P25-201ENST00000412447 352 ntBASIC4.29□□□□□ -1.72
TOP1P11387 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC4.29□□□□□ -1.72
TOP1P11387 AC245054.1-201ENST00000420944 258 ntBASIC4.29□□□□□ -1.72
TOP1P11387 RPL21P109-201ENST00000422213 475 ntBASIC4.29□□□□□ -1.72
TOP1P11387 AC105402.2-201ENST00000438503 358 ntBASIC4.29□□□□□ -1.72
TOP1P11387 AL645931.1-201ENST00000439737 410 ntBASIC4.29□□□□□ -1.72
TOP1P11387 AC106707.2-201ENST00000484182 374 ntBASIC4.29□□□□□ -1.72
TOP1P11387 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC4.29□□□□□ -1.72
TOP1P11387 RN7SKP157-201ENST00000516174 282 ntBASIC4.29□□□□□ -1.72
TOP1P11387 RN7SKP209-201ENST00000516888 304 ntBASIC4.29□□□□□ -1.72
TOP1P11387 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC4.29□□□□□ -1.72
TOP1P11387 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC4.29□□□□□ -1.72
TOP1P11387 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC4.29□□□□□ -1.72
TOP1P11387 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC4.29□□□□□ -1.72
TOP1P11387 AC009268.1-201ENST00000561352 1203 ntBASIC4.29□□□□□ -1.72
TOP1P11387 ST20-203ENST00000562759 694 ntAPPRIS P1 TSL 2 BASIC4.29□□□□□ -1.72
TOP1P11387 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC4.29□□□□□ -1.72
TOP1P11387 MIR92B-201ENST00000607575 96 ntBASIC4.29□□□□□ -1.72
TOP1P11387 AC009093.8-201ENST00000641769 292 ntBASIC4.29□□□□□ -1.72
TOP1P11387 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
TOP1P11387 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
TOP1P11387 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC4.29□□□□□ -1.72
TOP1P11387 ZNF33CP-201ENST00000432492 2030 ntBASIC4.29□□□□□ -1.72
TOP1P11387 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
TOP1P11387 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
TOP1P11387 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
TOP1P11387 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC4.28□□□□□ -1.72
TOP1P11387 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC4.28□□□□□ -1.72
TOP1P11387 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC4.28□□□□□ -1.72
TOP1P11387 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC4.28□□□□□ -1.72
TOP1P11387 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
TOP1P11387 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC4.28□□□□□ -1.72
TOP1P11387 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
TOP1P11387 MIR421-201ENST00000365696 85 ntBASIC4.28□□□□□ -1.72
TOP1P11387 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC4.28□□□□□ -1.72
TOP1P11387 RNU6-452P-201ENST00000384406 107 ntBASIC4.28□□□□□ -1.72
TOP1P11387 RNA5SP171-201ENST00000391071 115 ntBASIC4.28□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 113.4 ms