Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC2.9□□□□□ -1.95
CTSDP07339 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
CTSDP07339 AP004289.2-201ENST00000444413 1457 ntBASIC2.9□□□□□ -1.95
CTSDP07339 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
CTSDP07339 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
CTSDP07339 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC2.89□□□□□ -1.95
CTSDP07339 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC2.89□□□□□ -1.95
CTSDP07339 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC2.89□□□□□ -1.95
CTSDP07339 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC2.89□□□□□ -1.95
CTSDP07339 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
CTSDP07339 RNA5SP479-201ENST00000364858 117 ntBASIC2.89□□□□□ -1.95
CTSDP07339 MIR30B-201ENST00000384850 88 ntBASIC2.89□□□□□ -1.95
CTSDP07339 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC2.89□□□□□ -1.95
CTSDP07339 RNU2-37P-201ENST00000410695 177 ntBASIC2.89□□□□□ -1.95
CTSDP07339 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC2.89□□□□□ -1.95
CTSDP07339 AC008264.1-201ENST00000447612 367 ntBASIC2.89□□□□□ -1.95
CTSDP07339 RPS20P32-201ENST00000456044 356 ntBASIC2.89□□□□□ -1.95
CTSDP07339 AC109992.2-201ENST00000460977 765 ntTSL 3 BASIC2.89□□□□□ -1.95
CTSDP07339 RPL23AP12-201ENST00000467573 473 ntBASIC2.89□□□□□ -1.95
CTSDP07339 AC092185.1-201ENST00000491371 97 ntBASIC2.89□□□□□ -1.95
CTSDP07339 AC012170.1-201ENST00000495139 359 ntBASIC2.89□□□□□ -1.95
CTSDP07339 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC2.89□□□□□ -1.95
CTSDP07339 KCTD9P5-201ENST00000504141 1170 ntBASIC2.89□□□□□ -1.95
CTSDP07339 LINC02278-201ENST00000512170 500 ntTSL 5 BASIC2.89□□□□□ -1.95
CTSDP07339 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC2.89□□□□□ -1.95
CTSDP07339 Vault.1-201ENST00000516474 102 ntBASIC2.89□□□□□ -1.95
CTSDP07339 TBCA-206ENST00000518338 551 ntTSL 2 BASIC2.89□□□□□ -1.95
CTSDP07339 AC090541.1-201ENST00000519803 467 ntTSL 3 BASIC2.89□□□□□ -1.95
CTSDP07339 RANP9-201ENST00000519957 271 ntBASIC2.89□□□□□ -1.95
CTSDP07339 AC068657.1-201ENST00000520807 306 ntBASIC2.89□□□□□ -1.95
CTSDP07339 LINC02446-201ENST00000544591 868 ntTSL 2 BASIC2.89□□□□□ -1.95
CTSDP07339 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC2.89□□□□□ -1.95
CTSDP07339 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC2.89□□□□□ -1.95
CTSDP07339 AC068714.1-201ENST00000559623 800 ntBASIC2.89□□□□□ -1.95
CTSDP07339 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC2.89□□□□□ -1.95
CTSDP07339 AC120349.1-201ENST00000599498 282 ntTSL 5 BASIC2.89□□□□□ -1.95
CTSDP07339 AC099676.1-201ENST00000608886 657 ntBASIC2.89□□□□□ -1.95
CTSDP07339 AC090912.3-201ENST00000609775 533 ntBASIC2.89□□□□□ -1.95
CTSDP07339 AC024941.1-201ENST00000612250 334 ntBASIC2.89□□□□□ -1.95
CTSDP07339 AC112200.1-201ENST00000625015 234 ntBASIC2.89□□□□□ -1.95
CTSDP07339 AC073476.4-201ENST00000628409 72 ntBASIC2.89□□□□□ -1.95
CTSDP07339 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC2.89□□□□□ -1.95
CTSDP07339 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
CTSDP07339 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
CTSDP07339 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC2.88□□□□□ -1.95
CTSDP07339 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC2.88□□□□□ -1.95
CTSDP07339 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
CTSDP07339 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
CTSDP07339 SNORD56.3-201ENST00000363507 71 ntBASIC2.88□□□□□ -1.95
CTSDP07339 U3.11-201ENST00000364476 212 ntBASIC2.88□□□□□ -1.95
CTSDP07339 RNA5SP515-201ENST00000364570 118 ntBASIC2.88□□□□□ -1.95
CTSDP07339 RNA5SP167-201ENST00000365461 116 ntBASIC2.88□□□□□ -1.95
CTSDP07339 OR6C65-201ENST00000379665 1076 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
CTSDP07339 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC2.88□□□□□ -1.95
CTSDP07339 AC009468.1-201ENST00000412800 437 ntTSL 3 BASIC2.88□□□□□ -1.95
CTSDP07339 HMGB3P23-201ENST00000414981 585 ntBASIC2.88□□□□□ -1.95
CTSDP07339 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC2.88□□□□□ -1.95
CTSDP07339 AL356968.1-201ENST00000416622 474 ntBASIC2.88□□□□□ -1.95
CTSDP07339 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
CTSDP07339 AL139247.1-201ENST00000422768 325 ntBASIC2.88□□□□□ -1.95
CTSDP07339 AC097262.1-201ENST00000452559 548 ntBASIC2.88□□□□□ -1.95
CTSDP07339 AC108078.3-201ENST00000502633 489 ntBASIC2.88□□□□□ -1.95
CTSDP07339 AC114967.1-201ENST00000504890 259 ntBASIC2.88□□□□□ -1.95
CTSDP07339 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC2.88□□□□□ -1.95
CTSDP07339 STX3-204ENST00000530221 534 ntTSL 5 BASIC2.88□□□□□ -1.95
CTSDP07339 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC2.88□□□□□ -1.95
CTSDP07339 AC084824.1-201ENST00000550917 1005 ntBASIC2.88□□□□□ -1.95
CTSDP07339 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC2.88□□□□□ -1.95
CTSDP07339 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC2.88□□□□□ -1.95
CTSDP07339 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC2.88□□□□□ -1.95
CTSDP07339 AC087499.8-201ENST00000578406 226 ntBASIC2.88□□□□□ -1.95
CTSDP07339 RN7SL703P-201ENST00000578485 302 ntBASIC2.88□□□□□ -1.95
CTSDP07339 MIR5685-201ENST00000579080 79 ntBASIC2.88□□□□□ -1.95
CTSDP07339 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC2.88□□□□□ -1.95
CTSDP07339 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC2.88□□□□□ -1.95
CTSDP07339 AC034236.3-201ENST00000605999 461 ntBASIC2.88□□□□□ -1.95
CTSDP07339 SNORA35B-201ENST00000607417 129 ntBASIC2.88□□□□□ -1.95
CTSDP07339 AC112211.1-201ENST00000607832 305 ntTSL 3 BASIC2.88□□□□□ -1.95
CTSDP07339 AC026951.1-201ENST00000559530 2459 ntBASIC2.88□□□□□ -1.95
CTSDP07339 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC2.88□□□□□ -1.95
CTSDP07339 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC2.88□□□□□ -1.95
CTSDP07339 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
CTSDP07339 AC032011.1-201ENST00000611703 1549 ntBASIC2.88□□□□□ -1.95
CTSDP07339 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
CTSDP07339 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
CTSDP07339 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC2.87□□□□□ -1.95
CTSDP07339 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC2.87□□□□□ -1.95
CTSDP07339 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
CTSDP07339 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
CTSDP07339 TCEAL7-201ENST00000332431 1177 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
CTSDP07339 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
CTSDP07339 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
CTSDP07339 RNU6-225P-201ENST00000384613 103 ntBASIC2.87□□□□□ -1.95
CTSDP07339 SNORA57.1-201ENST00000391227 145 ntBASIC2.87□□□□□ -1.95
CTSDP07339 RPL32P23-201ENST00000397237 405 ntBASIC2.87□□□□□ -1.95
CTSDP07339 RPL7P60-201ENST00000397636 735 ntBASIC2.87□□□□□ -1.95
CTSDP07339 MTND2P15-201ENST00000418575 892 ntBASIC2.87□□□□□ -1.95
CTSDP07339 AC073069.1-201ENST00000428657 441 ntBASIC2.87□□□□□ -1.95
CTSDP07339 HSD52-202ENST00000436225 772 ntTSL 3 BASIC2.87□□□□□ -1.95
CTSDP07339 FTH1P1-201ENST00000437933 532 ntBASIC2.87□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 76.4 ms