Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC4.55□□□□□ -1.68
RB1P06400 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
RB1P06400 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC4.55□□□□□ -1.68
RB1P06400 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
RB1P06400 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.54□□□□□ -1.68
RB1P06400 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
RB1P06400 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
RB1P06400 AC007390.2-201ENST00000606229 3803 ntBASIC4.54□□□□□ -1.68
RB1P06400 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
RB1P06400 BCLAF1P2-201ENST00000624956 2609 ntBASIC4.54□□□□□ -1.68
RB1P06400 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC4.54□□□□□ -1.68
RB1P06400 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
RB1P06400 AC016716.1-201ENST00000265882 708 ntBASIC4.54□□□□□ -1.68
RB1P06400 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
RB1P06400 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC4.54□□□□□ -1.68
RB1P06400 MIR208A-201ENST00000362287 71 ntBASIC4.54□□□□□ -1.68
RB1P06400 RNA5SP307-201ENST00000362863 116 ntBASIC4.54□□□□□ -1.68
RB1P06400 SNORD46.1-201ENST00000364139 104 ntBASIC4.54□□□□□ -1.68
RB1P06400 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC4.54□□□□□ -1.68
RB1P06400 CGA-201ENST00000369582 729 ntTSL 5 BASIC4.54□□□□□ -1.68
RB1P06400 RNU1-63P-201ENST00000383902 164 ntBASIC4.54□□□□□ -1.68
RB1P06400 SFR1P1-201ENST00000403720 688 ntBASIC4.54□□□□□ -1.68
RB1P06400 SNORA74C-2-201ENST00000411179 201 ntBASIC4.54□□□□□ -1.68
RB1P06400 RNU6-575P-201ENST00000411326 105 ntBASIC4.54□□□□□ -1.68
RB1P06400 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC4.54□□□□□ -1.68
RB1P06400 MTCO2P8-201ENST00000412213 658 ntBASIC4.54□□□□□ -1.68
RB1P06400 HSFY1P1-201ENST00000423928 1178 ntBASIC4.54□□□□□ -1.68
RB1P06400 MTCO2P23-201ENST00000425216 680 ntBASIC4.54□□□□□ -1.68
RB1P06400 RWDD4P2-201ENST00000426392 563 ntBASIC4.54□□□□□ -1.68
RB1P06400 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC4.54□□□□□ -1.68
RB1P06400 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC4.54□□□□□ -1.68
RB1P06400 RAB11AP1-201ENST00000442978 646 ntBASIC4.54□□□□□ -1.68
RB1P06400 AL031313.1-201ENST00000448435 256 ntBASIC4.54□□□□□ -1.68
RB1P06400 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC4.54□□□□□ -1.68
RB1P06400 EXOSC3P1-201ENST00000448649 500 ntBASIC4.54□□□□□ -1.68
RB1P06400 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
RB1P06400 RPL23AP65-201ENST00000475608 468 ntBASIC4.54□□□□□ -1.68
RB1P06400 GTF2IP9-201ENST00000502460 301 ntBASIC4.54□□□□□ -1.68
RB1P06400 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC4.54□□□□□ -1.68
RB1P06400 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC4.54□□□□□ -1.68
RB1P06400 PAICSP4-201ENST00000517543 1253 ntBASIC4.54□□□□□ -1.68
RB1P06400 AC023632.1-201ENST00000518463 375 ntBASIC4.54□□□□□ -1.68
RB1P06400 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC4.54□□□□□ -1.68
RB1P06400 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC4.54□□□□□ -1.68
RB1P06400 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC4.54□□□□□ -1.68
RB1P06400 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC4.54□□□□□ -1.68
RB1P06400 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC4.54□□□□□ -1.68
RB1P06400 AC017100.2-201ENST00000584628 355 ntBASIC4.54□□□□□ -1.68
RB1P06400 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC4.54□□□□□ -1.68
RB1P06400 AC008687.2-201ENST00000597865 520 ntBASIC4.54□□□□□ -1.68
RB1P06400 AC112230.1-201ENST00000604342 547 ntBASIC4.54□□□□□ -1.68
RB1P06400 AL583856.2-201ENST00000606298 543 ntBASIC4.54□□□□□ -1.68
RB1P06400 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC4.54□□□□□ -1.68
RB1P06400 AC067931.1-201ENST00000624190 671 ntBASIC4.54□□□□□ -1.68
RB1P06400 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
RB1P06400 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
RB1P06400 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC4.54□□□□□ -1.68
RB1P06400 AC087190.4-201ENST00000574616 8334 ntBASIC4.54□□□□□ -1.68
RB1P06400 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
RB1P06400 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
RB1P06400 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC4.53□□□□□ -1.68
RB1P06400 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
RB1P06400 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
RB1P06400 OR11H4-201ENST00000315409 1082 ntBASIC4.53□□□□□ -1.68
RB1P06400 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
RB1P06400 RNU6-224P-201ENST00000384055 107 ntBASIC4.53□□□□□ -1.68
RB1P06400 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC4.53□□□□□ -1.68
RB1P06400 CRYBB2P1-203ENST00000415709 538 ntBASIC4.53□□□□□ -1.68
RB1P06400 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC4.53□□□□□ -1.68
RB1P06400 SAGE2P-201ENST00000420011 2126 ntBASIC4.53□□□□□ -1.68
RB1P06400 MTCO1P54-201ENST00000430139 712 ntBASIC4.53□□□□□ -1.68
RB1P06400 AL035246.1-201ENST00000433554 1255 ntBASIC4.53□□□□□ -1.68
RB1P06400 RPL23AP46-201ENST00000438548 490 ntBASIC4.53□□□□□ -1.68
RB1P06400 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC4.53□□□□□ -1.68
RB1P06400 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC4.53□□□□□ -1.68
RB1P06400 RPL7P31-201ENST00000450192 724 ntBASIC4.53□□□□□ -1.68
RB1P06400 RPL21P71-201ENST00000465598 459 ntBASIC4.53□□□□□ -1.68
RB1P06400 GAPDHP39-201ENST00000481866 979 ntBASIC4.53□□□□□ -1.68
RB1P06400 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
RB1P06400 TRAV31-201ENST00000502780 342 ntBASIC4.53□□□□□ -1.68
RB1P06400 MTATP6P22-201ENST00000507369 598 ntBASIC4.53□□□□□ -1.68
RB1P06400 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC4.53□□□□□ -1.68
RB1P06400 RNU6-202P-201ENST00000515998 96 ntBASIC4.53□□□□□ -1.68
RB1P06400 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC4.53□□□□□ -1.68
RB1P06400 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC4.53□□□□□ -1.68
RB1P06400 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC4.53□□□□□ -1.68
RB1P06400 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC4.53□□□□□ -1.68
RB1P06400 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC4.53□□□□□ -1.68
RB1P06400 AL352979.3-201ENST00000553515 247 ntBASIC4.53□□□□□ -1.68
RB1P06400 AC044913.1-201ENST00000557200 430 ntBASIC4.53□□□□□ -1.68
RB1P06400 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC4.53□□□□□ -1.68
RB1P06400 AC027455.1-201ENST00000574104 594 ntBASIC4.53□□□□□ -1.68
RB1P06400 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC4.53□□□□□ -1.68
RB1P06400 COX6CP4-201ENST00000605798 228 ntBASIC4.53□□□□□ -1.68
RB1P06400 AC027449.1-201ENST00000608890 407 ntBASIC4.53□□□□□ -1.68
RB1P06400 AP005137.2-201ENST00000609238 400 ntBASIC4.53□□□□□ -1.68
RB1P06400 AC123767.1-202ENST00000620407 817 ntBASIC4.53□□□□□ -1.68
RB1P06400 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC4.53□□□□□ -1.68
RB1P06400 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
RB1P06400 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 118.8 ms