Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 RNU2-15P-201ENST00000410692 191 ntBASIC5.91□□□□□ -1.46
PDGFAP04085 AC069213.2-201ENST00000420238 366 ntBASIC5.91□□□□□ -1.46
PDGFAP04085 MTATP6P16-201ENST00000434543 526 ntBASIC5.91□□□□□ -1.46
PDGFAP04085 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
PDGFAP04085 SUMO2P3-201ENST00000438311 288 ntBASIC5.91□□□□□ -1.46
PDGFAP04085 AC105402.2-201ENST00000438503 358 ntBASIC5.91□□□□□ -1.46
PDGFAP04085 AC108488.1-202ENST00000439547 482 ntTSL 3 BASIC5.91□□□□□ -1.46
PDGFAP04085 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC5.91□□□□□ -1.46
PDGFAP04085 RPL21P89-201ENST00000444021 467 ntBASIC5.91□□□□□ -1.46
PDGFAP04085 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
PDGFAP04085 Y_RNA.639-201ENST00000458981 102 ntBASIC5.91□□□□□ -1.46
PDGFAP04085 RNU6-333P-201ENST00000459117 107 ntBASIC5.91□□□□□ -1.46
PDGFAP04085 Y_RNA.631-201ENST00000459607 101 ntBASIC5.91□□□□□ -1.46
PDGFAP04085 AC023194.2-201ENST00000465398 406 ntBASIC5.91□□□□□ -1.46
PDGFAP04085 AC020893.1-201ENST00000502452 580 ntBASIC5.91□□□□□ -1.46
PDGFAP04085 AC116562.3-201ENST00000506136 177 ntBASIC5.91□□□□□ -1.46
PDGFAP04085 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC5.91□□□□□ -1.46
PDGFAP04085 RNU2-10P-201ENST00000516375 211 ntBASIC5.91□□□□□ -1.46
PDGFAP04085 RNU7-51P-201ENST00000516560 62 ntBASIC5.91□□□□□ -1.46
PDGFAP04085 RNA5SP340-201ENST00000517132 107 ntBASIC5.91□□□□□ -1.46
PDGFAP04085 SNORA25.17-201ENST00000517184 124 ntBASIC5.91□□□□□ -1.46
PDGFAP04085 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC5.91□□□□□ -1.46
PDGFAP04085 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC5.91□□□□□ -1.46
PDGFAP04085 AC068587.5-201ENST00000528506 175 ntBASIC5.91□□□□□ -1.46
PDGFAP04085 SOX9-AS1-208ENST00000529667 340 ntTSL 3 BASIC5.91□□□□□ -1.46
PDGFAP04085 OR52E8-201ENST00000537935 1061 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
PDGFAP04085 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC5.91□□□□□ -1.46
PDGFAP04085 AC079793.1-201ENST00000553076 713 ntTSL 4 BASIC5.91□□□□□ -1.46
PDGFAP04085 AC244502.3-201ENST00000555460 457 ntTSL 3 BASIC5.91□□□□□ -1.46
PDGFAP04085 TPRX1P1-201ENST00000557620 319 ntBASIC5.91□□□□□ -1.46
PDGFAP04085 AL022099.1-201ENST00000604551 712 ntBASIC5.91□□□□□ -1.46
PDGFAP04085 AC109309.2-201ENST00000612597 332 ntBASIC5.91□□□□□ -1.46
PDGFAP04085 AL138713.1-201ENST00000624026 2130 ntBASIC5.91□□□□□ -1.46
PDGFAP04085 COPS7B-225ENST00000631349 189 ntTSL 5 BASIC5.91□□□□□ -1.46
PDGFAP04085 AL133216.2-202ENST00000634512 349 ntBASIC5.91□□□□□ -1.46
PDGFAP04085 AL392046.2-202ENST00000635301 1113 ntTSL 5 BASIC5.91□□□□□ -1.46
PDGFAP04085 MTND5P42-201ENST00000637720 498 ntBASIC5.91□□□□□ -1.46
PDGFAP04085 SLC12A1-202ENST00000380993 4707 ntAPPRIS P3 TSL 5 BASIC5.91□□□□□ -1.46
PDGFAP04085 TRPC1-205ENST00000612385 3620 ntAPPRIS P3 TSL 1 (best) BASIC5.91□□□□□ -1.46
PDGFAP04085 NBPF19-205ENST00000612881 3715 ntTSL 5 BASIC5.91□□□□□ -1.46
PDGFAP04085 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
PDGFAP04085 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC5.91□□□□□ -1.46
PDGFAP04085 ECHDC1-210ENST00000454859 2341 ntAPPRIS P3 TSL 1 (best) BASIC5.91□□□□□ -1.46
PDGFAP04085 MLLT10-217ENST00000631589 4955 ntAPPRIS ALT2 TSL 5 BASIC5.9□□□□□ -1.46
PDGFAP04085 DAOA-AS1-201ENST00000448407 2482 ntTSL 2 BASIC5.9□□□□□ -1.46
PDGFAP04085 GNL2P1-201ENST00000451274 2190 ntBASIC5.9□□□□□ -1.46
PDGFAP04085 MTCO1P7-201ENST00000419523 1542 ntBASIC5.9□□□□□ -1.46
PDGFAP04085 AC093775.1-201ENST00000624154 1868 ntBASIC5.9□□□□□ -1.46
PDGFAP04085 KLHL2-210ENST00000538127 2907 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
PDGFAP04085 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC5.9□□□□□ -1.46
PDGFAP04085 DCX-207ENST00000635795 9163 ntAPPRIS P4 TSL 1 (best) BASIC5.9□□□□□ -1.46
PDGFAP04085 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
PDGFAP04085 TNP1-201ENST00000236979 407 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
PDGFAP04085 SNORA62.1-201ENST00000364287 154 ntBASIC5.9□□□□□ -1.46
PDGFAP04085 SNORA63C-201ENST00000364578 129 ntBASIC5.9□□□□□ -1.46
PDGFAP04085 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC5.9□□□□□ -1.46
PDGFAP04085 RNU6-1160P-201ENST00000384546 104 ntBASIC5.9□□□□□ -1.46
PDGFAP04085 Y_RNA.530-201ENST00000384587 101 ntBASIC5.9□□□□□ -1.46
PDGFAP04085 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
PDGFAP04085 RNU6-903P-201ENST00000391270 109 ntBASIC5.9□□□□□ -1.46
PDGFAP04085 AL049697.2-201ENST00000403708 294 ntBASIC5.9□□□□□ -1.46
PDGFAP04085 OR6C66P-201ENST00000414917 930 ntBASIC5.9□□□□□ -1.46
PDGFAP04085 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC5.9□□□□□ -1.46
PDGFAP04085 AC079355.1-201ENST00000421770 223 ntBASIC5.9□□□□□ -1.46
PDGFAP04085 IGKV3OR2-268-201ENST00000421835 350 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
PDGFAP04085 AL121902.1-201ENST00000426963 459 ntTSL 2 BASIC5.9□□□□□ -1.46
PDGFAP04085 BRWD1P3-201ENST00000428816 390 ntBASIC5.9□□□□□ -1.46
PDGFAP04085 RPL12P16-201ENST00000431098 498 ntBASIC5.9□□□□□ -1.46
PDGFAP04085 BX679664.2-201ENST00000439282 283 ntBASIC5.9□□□□□ -1.46
PDGFAP04085 AL353768.1-201ENST00000439872 487 ntTSL 3 BASIC5.9□□□□□ -1.46
PDGFAP04085 IGKV1OR-3-201ENST00000446944 348 ntBASIC5.9□□□□□ -1.46
PDGFAP04085 MTND1P9-201ENST00000453775 944 ntBASIC5.9□□□□□ -1.46
PDGFAP04085 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC5.9□□□□□ -1.46
PDGFAP04085 Y_RNA.635-201ENST00000459041 101 ntBASIC5.9□□□□□ -1.46
PDGFAP04085 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC5.9□□□□□ -1.46
PDGFAP04085 FAM107B-217ENST00000478076 790 ntAPPRIS P1 TSL 4 BASIC5.9□□□□□ -1.46
PDGFAP04085 AC104411.1-201ENST00000480817 320 ntTSL 3 BASIC5.9□□□□□ -1.46
PDGFAP04085 AC068587.1-201ENST00000483613 781 ntBASIC5.9□□□□□ -1.46
PDGFAP04085 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC5.9□□□□□ -1.46
PDGFAP04085 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC5.9□□□□□ -1.46
PDGFAP04085 AC060775.1-201ENST00000518241 520 ntBASIC5.9□□□□□ -1.46
PDGFAP04085 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC5.9□□□□□ -1.46
PDGFAP04085 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC5.9□□□□□ -1.46
PDGFAP04085 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC5.9□□□□□ -1.46
PDGFAP04085 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC5.9□□□□□ -1.46
PDGFAP04085 AL357153.3-201ENST00000553982 611 ntTSL 3 BASIC5.9□□□□□ -1.46
PDGFAP04085 AL591767.3-201ENST00000554632 525 ntBASIC5.9□□□□□ -1.46
PDGFAP04085 AL132800.1-201ENST00000555109 698 ntTSL 5 BASIC5.9□□□□□ -1.46
PDGFAP04085 FXNP1-201ENST00000555153 337 ntBASIC5.9□□□□□ -1.46
PDGFAP04085 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC5.9□□□□□ -1.46
PDGFAP04085 AC124068.1-201ENST00000563131 678 ntBASIC5.9□□□□□ -1.46
PDGFAP04085 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC5.9□□□□□ -1.46
PDGFAP04085 AC007151.1-201ENST00000572774 483 ntBASIC5.9□□□□□ -1.46
PDGFAP04085 SNORA70D-201ENST00000578836 135 ntBASIC5.9□□□□□ -1.46
PDGFAP04085 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC5.9□□□□□ -1.46
PDGFAP04085 AC004917.1-204ENST00000592441 701 ntTSL 2 BASIC5.9□□□□□ -1.46
PDGFAP04085 AL031666.3-201ENST00000609320 1006 ntBASIC5.9□□□□□ -1.46
PDGFAP04085 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC5.9□□□□□ -1.46
PDGFAP04085 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC5.9□□□□□ -1.46
PDGFAP04085 AL445647.2-201ENST00000615170 130 ntBASIC5.9□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 88.2 ms