Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 U6.112-201ENST00000384129 70 ntBASIC3.79□□□□□ -1.8
MT-ND1P03886 SNORD65C-201ENST00000390962 71 ntBASIC3.79□□□□□ -1.8
MT-ND1P03886 AL603865.2-201ENST00000401679 213 ntBASIC3.79□□□□□ -1.8
MT-ND1P03886 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC3.79□□□□□ -1.8
MT-ND1P03886 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC3.79□□□□□ -1.8
MT-ND1P03886 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC3.79□□□□□ -1.8
MT-ND1P03886 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC3.79□□□□□ -1.8
MT-ND1P03886 PTP4A1P7-201ENST00000423476 514 ntBASIC3.79□□□□□ -1.8
MT-ND1P03886 AC115285.1-201ENST00000424879 736 ntBASIC3.79□□□□□ -1.8
MT-ND1P03886 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC3.79□□□□□ -1.8
MT-ND1P03886 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC3.79□□□□□ -1.8
MT-ND1P03886 OR4F13P-201ENST00000428478 931 ntBASIC3.79□□□□□ -1.8
MT-ND1P03886 CNOT7P1-201ENST00000429006 852 ntBASIC3.79□□□□□ -1.8
MT-ND1P03886 RPL23AP46-201ENST00000438548 490 ntBASIC3.79□□□□□ -1.8
MT-ND1P03886 AC009263.1-201ENST00000441193 1239 ntBASIC3.79□□□□□ -1.8
MT-ND1P03886 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC3.79□□□□□ -1.8
MT-ND1P03886 AC006011.1-201ENST00000442758 349 ntBASIC3.79□□□□□ -1.8
MT-ND1P03886 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC3.79□□□□□ -1.8
MT-ND1P03886 NDUFAF4P2-201ENST00000445374 520 ntBASIC3.79□□□□□ -1.8
MT-ND1P03886 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC3.79□□□□□ -1.8
MT-ND1P03886 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC3.79□□□□□ -1.8
MT-ND1P03886 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC3.79□□□□□ -1.8
MT-ND1P03886 BX276092.4-201ENST00000452056 248 ntBASIC3.79□□□□□ -1.8
MT-ND1P03886 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC3.79□□□□□ -1.8
MT-ND1P03886 SNRPGP5-201ENST00000456003 220 ntBASIC3.79□□□□□ -1.8
MT-ND1P03886 TRAV31-201ENST00000502780 342 ntBASIC3.79□□□□□ -1.8
MT-ND1P03886 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC3.79□□□□□ -1.8
MT-ND1P03886 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC3.79□□□□□ -1.8
MT-ND1P03886 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC3.79□□□□□ -1.8
MT-ND1P03886 KCTD9P2-201ENST00000512203 1013 ntBASIC3.79□□□□□ -1.8
MT-ND1P03886 RNA5SP49-201ENST00000516450 115 ntBASIC3.79□□□□□ -1.8
MT-ND1P03886 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC3.79□□□□□ -1.8
MT-ND1P03886 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC3.79□□□□□ -1.8
MT-ND1P03886 AC112693.1-201ENST00000555297 682 ntTSL 3 BASIC3.79□□□□□ -1.8
MT-ND1P03886 AC068831.4-201ENST00000556118 109 ntBASIC3.79□□□□□ -1.8
MT-ND1P03886 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC3.79□□□□□ -1.8
MT-ND1P03886 AC010735.1-201ENST00000567305 1026 ntBASIC3.79□□□□□ -1.8
MT-ND1P03886 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC3.79□□□□□ -1.8
MT-ND1P03886 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC3.79□□□□□ -1.8
MT-ND1P03886 AL591424.2-201ENST00000617023 128 ntBASIC3.79□□□□□ -1.8
MT-ND1P03886 DDAH1-206ENST00000633113 703 ntTSL 2 BASIC3.79□□□□□ -1.8
MT-ND1P03886 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC3.79□□□□□ -1.8
MT-ND1P03886 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
MT-ND1P03886 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC3.79□□□□□ -1.8
MT-ND1P03886 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
MT-ND1P03886 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
MT-ND1P03886 AC012618.3-205ENST00000637896 1496 ntBASIC3.79□□□□□ -1.8
MT-ND1P03886 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
MT-ND1P03886 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
MT-ND1P03886 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
MT-ND1P03886 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.78□□□□□ -1.8
MT-ND1P03886 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
MT-ND1P03886 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
MT-ND1P03886 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC3.78□□□□□ -1.8
MT-ND1P03886 MIR192-201ENST00000384915 110 ntBASIC3.78□□□□□ -1.8
MT-ND1P03886 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
MT-ND1P03886 RNU6-932P-201ENST00000391108 106 ntBASIC3.78□□□□□ -1.8
MT-ND1P03886 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.78□□□□□ -1.8
MT-ND1P03886 BTBD10P2-201ENST00000404779 676 ntBASIC3.78□□□□□ -1.8
MT-ND1P03886 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC3.78□□□□□ -1.8
MT-ND1P03886 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC3.78□□□□□ -1.8
MT-ND1P03886 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC3.78□□□□□ -1.8
MT-ND1P03886 PSMA2P3-201ENST00000429685 675 ntBASIC3.78□□□□□ -1.8
MT-ND1P03886 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC3.78□□□□□ -1.8
MT-ND1P03886 AC099654.1-201ENST00000442649 407 ntTSL 3 BASIC3.78□□□□□ -1.8
MT-ND1P03886 HSFY3P-201ENST00000444242 1191 ntBASIC3.78□□□□□ -1.8
MT-ND1P03886 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC3.78□□□□□ -1.8
MT-ND1P03886 AL606517.1-201ENST00000446914 387 ntBASIC3.78□□□□□ -1.8
MT-ND1P03886 AC233982.1-201ENST00000451247 436 ntBASIC3.78□□□□□ -1.8
MT-ND1P03886 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC3.78□□□□□ -1.8
MT-ND1P03886 Z95152.1-201ENST00000453556 656 ntBASIC3.78□□□□□ -1.8
MT-ND1P03886 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC3.78□□□□□ -1.8
MT-ND1P03886 HMGB3P30-201ENST00000457863 606 ntBASIC3.78□□□□□ -1.8
MT-ND1P03886 snoU109.3-201ENST00000459477 145 ntBASIC3.78□□□□□ -1.8
MT-ND1P03886 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
MT-ND1P03886 AC010460.2-201ENST00000509054 677 ntBASIC3.78□□□□□ -1.8
MT-ND1P03886 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC3.78□□□□□ -1.8
MT-ND1P03886 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC3.78□□□□□ -1.8
MT-ND1P03886 AC105233.3-201ENST00000531125 744 ntBASIC3.78□□□□□ -1.8
MT-ND1P03886 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
MT-ND1P03886 AC141257.3-201ENST00000572906 215 ntBASIC3.78□□□□□ -1.8
MT-ND1P03886 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
MT-ND1P03886 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC3.78□□□□□ -1.8
MT-ND1P03886 AL022067.1-201ENST00000602426 454 ntBASIC3.78□□□□□ -1.8
MT-ND1P03886 MRPS35P3-201ENST00000603189 709 ntBASIC3.78□□□□□ -1.8
MT-ND1P03886 RPAP2P1-201ENST00000603626 1168 ntBASIC3.78□□□□□ -1.8
MT-ND1P03886 AC091488.1-201ENST00000604239 660 ntBASIC3.78□□□□□ -1.8
MT-ND1P03886 AC034229.4-201ENST00000607861 441 ntBASIC3.78□□□□□ -1.8
MT-ND1P03886 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC3.78□□□□□ -1.8
MT-ND1P03886 RNU6-1192P-201ENST00000612197 107 ntBASIC3.78□□□□□ -1.8
MT-ND1P03886 RNU6-489P-201ENST00000618289 107 ntBASIC3.78□□□□□ -1.8
MT-ND1P03886 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC3.78□□□□□ -1.8
MT-ND1P03886 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
MT-ND1P03886 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
MT-ND1P03886 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC3.78□□□□□ -1.8
MT-ND1P03886 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
MT-ND1P03886 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC3.77□□□□□ -1.81
MT-ND1P03886 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
MT-ND1P03886 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
MT-ND1P03886 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 146.3 ms