Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 AC093331.1-201ENST00000521474 169 ntBASIC3.74□□□□□ -1.81
APOEP02649 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.74□□□□□ -1.81
APOEP02649 IGKV2D-19-201ENST00000523346 262 ntBASIC3.74□□□□□ -1.81
APOEP02649 HIGD1AP10-201ENST00000527837 282 ntBASIC3.74□□□□□ -1.81
APOEP02649 OR8I1P-201ENST00000529291 931 ntBASIC3.74□□□□□ -1.81
APOEP02649 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC3.74□□□□□ -1.81
APOEP02649 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC3.74□□□□□ -1.81
APOEP02649 AC007823.1-201ENST00000569932 1566 ntBASIC3.74□□□□□ -1.81
APOEP02649 AC006077.1-201ENST00000604746 343 ntBASIC3.74□□□□□ -1.81
APOEP02649 SNORA51-201ENST00000606420 132 ntBASIC3.74□□□□□ -1.81
APOEP02649 AL592295.2-201ENST00000612578 206 ntBASIC3.74□□□□□ -1.81
APOEP02649 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
APOEP02649 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC3.74□□□□□ -1.81
APOEP02649 XIST_intron.1-201ENST00000619444 68 ntBASIC3.74□□□□□ -1.81
APOEP02649 AP003355.3-201ENST00000623465 114 ntBASIC3.74□□□□□ -1.81
APOEP02649 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
APOEP02649 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC3.74□□□□□ -1.81
APOEP02649 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.74□□□□□ -1.81
APOEP02649 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.74□□□□□ -1.81
APOEP02649 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
APOEP02649 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
APOEP02649 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.74□□□□□ -1.81
APOEP02649 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.74□□□□□ -1.81
APOEP02649 SPATA2P1-201ENST00000431223 2055 ntBASIC3.74□□□□□ -1.81
APOEP02649 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
APOEP02649 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
APOEP02649 ZNF542P-204ENST00000482727 1305 ntBASIC3.73□□□□□ -1.81
APOEP02649 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
APOEP02649 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
APOEP02649 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
APOEP02649 OR52N4-201ENST00000317254 1037 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
APOEP02649 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
APOEP02649 Y_RNA.62-201ENST00000362840 99 ntBASIC3.73□□□□□ -1.81
APOEP02649 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
APOEP02649 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
APOEP02649 RPS29P4-201ENST00000414733 161 ntBASIC3.73□□□□□ -1.81
APOEP02649 AC007390.1-201ENST00000415722 356 ntBASIC3.73□□□□□ -1.81
APOEP02649 SYF2P2-201ENST00000417620 583 ntBASIC3.73□□□□□ -1.81
APOEP02649 LINC00317-201ENST00000419069 612 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
APOEP02649 AC006989.1-201ENST00000427212 131 ntBASIC3.73□□□□□ -1.81
APOEP02649 GCA-203ENST00000429691 824 ntTSL 3 BASIC3.73□□□□□ -1.81
APOEP02649 VN1R34P-201ENST00000447387 883 ntBASIC3.73□□□□□ -1.81
APOEP02649 AL157884.3-201ENST00000448273 1184 ntBASIC3.73□□□□□ -1.81
APOEP02649 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC3.73□□□□□ -1.81
APOEP02649 TVP23BP2-201ENST00000455082 615 ntBASIC3.73□□□□□ -1.81
APOEP02649 SNRPGP3-201ENST00000469405 227 ntBASIC3.73□□□□□ -1.81
APOEP02649 AC106707.2-201ENST00000484182 374 ntBASIC3.73□□□□□ -1.81
APOEP02649 RPS3AP50-201ENST00000487064 803 ntBASIC3.73□□□□□ -1.81
APOEP02649 AC005726.1-201ENST00000494679 427 ntBASIC3.73□□□□□ -1.81
APOEP02649 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC3.73□□□□□ -1.81
APOEP02649 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC3.73□□□□□ -1.81
APOEP02649 RN7SKP157-201ENST00000516174 282 ntBASIC3.73□□□□□ -1.81
APOEP02649 TBCA-206ENST00000518338 551 ntTSL 2 BASIC3.73□□□□□ -1.81
APOEP02649 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC3.73□□□□□ -1.81
APOEP02649 AC025260.1-201ENST00000548858 430 ntBASIC3.73□□□□□ -1.81
APOEP02649 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC3.73□□□□□ -1.81
APOEP02649 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC3.73□□□□□ -1.81
APOEP02649 MIR4458-201ENST00000578872 75 ntBASIC3.73□□□□□ -1.81
APOEP02649 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC3.73□□□□□ -1.81
APOEP02649 AC006116.10-201ENST00000591836 581 ntBASIC3.73□□□□□ -1.81
APOEP02649 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC3.73□□□□□ -1.81
APOEP02649 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC3.73□□□□□ -1.81
APOEP02649 MIR7851-201ENST00000610611 160 ntBASIC3.73□□□□□ -1.81
APOEP02649 AL450489.1-201ENST00000612071 468 ntBASIC3.73□□□□□ -1.81
APOEP02649 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC3.73□□□□□ -1.81
APOEP02649 ZNF93-209ENST00000638737 1020 ntTSL 5 BASIC3.73□□□□□ -1.81
APOEP02649 AC009093.8-201ENST00000641769 292 ntBASIC3.73□□□□□ -1.81
APOEP02649 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC3.73□□□□□ -1.81
APOEP02649 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.73□□□□□ -1.81
APOEP02649 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.73□□□□□ -1.81
APOEP02649 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.72□□□□□ -1.81
APOEP02649 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.72□□□□□ -1.81
APOEP02649 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.72□□□□□ -1.81
APOEP02649 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
APOEP02649 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.72□□□□□ -1.81
APOEP02649 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
APOEP02649 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.72□□□□□ -1.81
APOEP02649 MIR449B-201ENST00000384995 97 ntBASIC3.72□□□□□ -1.81
APOEP02649 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.72□□□□□ -1.81
APOEP02649 RPL31P52-201ENST00000407532 367 ntBASIC3.72□□□□□ -1.81
APOEP02649 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
APOEP02649 AC069157.1-201ENST00000421749 137 ntBASIC3.72□□□□□ -1.81
APOEP02649 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC3.72□□□□□ -1.81
APOEP02649 AC091286.1-201ENST00000431233 461 ntBASIC3.72□□□□□ -1.81
APOEP02649 AL050321.1-201ENST00000432363 400 ntBASIC3.72□□□□□ -1.81
APOEP02649 OR6C72P-201ENST00000451403 892 ntBASIC3.72□□□□□ -1.81
APOEP02649 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC3.72□□□□□ -1.81
APOEP02649 RPL12P26-201ENST00000452430 487 ntBASIC3.72□□□□□ -1.81
APOEP02649 RPL23AP12-201ENST00000467573 473 ntBASIC3.72□□□□□ -1.81
APOEP02649 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC3.72□□□□□ -1.81
APOEP02649 RNU6-579P-201ENST00000516879 102 ntBASIC3.72□□□□□ -1.81
APOEP02649 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
APOEP02649 AP000926.4-201ENST00000527351 454 ntBASIC3.72□□□□□ -1.81
APOEP02649 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC3.72□□□□□ -1.81
APOEP02649 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC3.72□□□□□ -1.81
APOEP02649 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC3.72□□□□□ -1.81
APOEP02649 MIR4429-201ENST00000580105 73 ntBASIC3.72□□□□□ -1.81
APOEP02649 AC007687.1-201ENST00000602704 304 ntBASIC3.72□□□□□ -1.81
APOEP02649 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.72□□□□□ -1.81
APOEP02649 AL359094.1-202ENST00000629917 1113 ntTSL 5 BASIC3.72□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 107.4 ms