Protein–RNA interactions for Protein: O60663

LMX1B, LIM homeobox transcription factor 1-beta, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1BO60663 AC091178.1-203ENST00000584586 279 ntBASIC3.98□□□□□ -1.77
LMX1BO60663 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC3.98□□□□□ -1.77
LMX1BO60663 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC3.98□□□□□ -1.77
LMX1BO60663 RPL12P25-202ENST00000598100 674 ntBASIC3.98□□□□□ -1.77
LMX1BO60663 BNIP3P26-201ENST00000600827 554 ntBASIC3.98□□□□□ -1.77
LMX1BO60663 AL137072.1-201ENST00000603444 466 ntBASIC3.98□□□□□ -1.77
LMX1BO60663 AC103792.1-201ENST00000603591 919 ntBASIC3.98□□□□□ -1.77
LMX1BO60663 AC104073.3-201ENST00000610942 955 ntBASIC3.98□□□□□ -1.77
LMX1BO60663 5S_rRNA.16-201ENST00000612928 119 ntBASIC3.98□□□□□ -1.77
LMX1BO60663 AL353726.1-201ENST00000614041 1000 ntBASIC3.98□□□□□ -1.77
LMX1BO60663 AL121873.1-201ENST00000616013 524 ntBASIC3.98□□□□□ -1.77
LMX1BO60663 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC3.98□□□□□ -1.77
LMX1BO60663 AC068831.8-201ENST00000620171 435 ntBASIC3.98□□□□□ -1.77
LMX1BO60663 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC3.98□□□□□ -1.77
LMX1BO60663 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC3.98□□□□□ -1.77
LMX1BO60663 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC3.98□□□□□ -1.77
LMX1BO60663 AF001550.2-201ENST00000636643 217 ntBASIC3.98□□□□□ -1.77
LMX1BO60663 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
LMX1BO60663 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
LMX1BO60663 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC3.98□□□□□ -1.77
LMX1BO60663 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
LMX1BO60663 MTCO1P6-201ENST00000481192 1384 ntBASIC3.98□□□□□ -1.77
LMX1BO60663 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
LMX1BO60663 AC017104.4-201ENST00000636283 1592 ntBASIC3.97□□□□□ -1.77
LMX1BO60663 AC006971.1-201ENST00000407916 4486 ntBASIC3.97□□□□□ -1.77
LMX1BO60663 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
LMX1BO60663 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC3.97□□□□□ -1.77
LMX1BO60663 AC093311.1-201ENST00000506586 2021 ntBASIC3.97□□□□□ -1.77
LMX1BO60663 ZFRP1-201ENST00000457579 2970 ntBASIC3.97□□□□□ -1.77
LMX1BO60663 AL356473.1-201ENST00000406203 1408 ntBASIC3.97□□□□□ -1.77
LMX1BO60663 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC3.97□□□□□ -1.77
LMX1BO60663 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC3.97□□□□□ -1.77
LMX1BO60663 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
LMX1BO60663 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC3.97□□□□□ -1.77
LMX1BO60663 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
LMX1BO60663 RNA5SP479-201ENST00000364858 117 ntBASIC3.97□□□□□ -1.77
LMX1BO60663 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC3.97□□□□□ -1.77
LMX1BO60663 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
LMX1BO60663 RNA5SP372-201ENST00000390836 115 ntBASIC3.97□□□□□ -1.77
LMX1BO60663 MIR1193-201ENST00000408109 78 ntBASIC3.97□□□□□ -1.77
LMX1BO60663 Y_RNA.619-201ENST00000410951 90 ntBASIC3.97□□□□□ -1.77
LMX1BO60663 ELOCP19-201ENST00000411919 318 ntBASIC3.97□□□□□ -1.77
LMX1BO60663 AC009237.10-201ENST00000414112 510 ntBASIC3.97□□□□□ -1.77
LMX1BO60663 MTCO1P21-201ENST00000416634 589 ntBASIC3.97□□□□□ -1.77
LMX1BO60663 AC140479.3-201ENST00000418944 1126 ntBASIC3.97□□□□□ -1.77
LMX1BO60663 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC3.97□□□□□ -1.77
LMX1BO60663 AL592293.2-201ENST00000422292 996 ntBASIC3.97□□□□□ -1.77
LMX1BO60663 AL139421.1-201ENST00000423010 169 ntBASIC3.97□□□□□ -1.77
LMX1BO60663 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC3.97□□□□□ -1.77
LMX1BO60663 AC234779.1-201ENST00000425910 285 ntBASIC3.97□□□□□ -1.77
LMX1BO60663 AC004975.1-201ENST00000428733 208 ntBASIC3.97□□□□□ -1.77
LMX1BO60663 SCP2-206ENST00000430330 938 ntTSL 2 BASIC3.97□□□□□ -1.77
LMX1BO60663 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC3.97□□□□□ -1.77
LMX1BO60663 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC3.97□□□□□ -1.77
LMX1BO60663 MTND4P6-201ENST00000438297 472 ntBASIC3.97□□□□□ -1.77
LMX1BO60663 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC3.97□□□□□ -1.77
LMX1BO60663 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC3.97□□□□□ -1.77
LMX1BO60663 H2AFZP5-201ENST00000446960 382 ntBASIC3.97□□□□□ -1.77
LMX1BO60663 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC3.97□□□□□ -1.77
LMX1BO60663 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC3.97□□□□□ -1.77
LMX1BO60663 SUN3-208ENST00000453192 801 ntTSL 5 BASIC3.97□□□□□ -1.77
LMX1BO60663 ISCUP1-201ENST00000454451 448 ntBASIC3.97□□□□□ -1.77
LMX1BO60663 SETP11-201ENST00000473027 690 ntBASIC3.97□□□□□ -1.77
LMX1BO60663 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC3.97□□□□□ -1.77
LMX1BO60663 RPL30P6-201ENST00000475925 342 ntBASIC3.97□□□□□ -1.77
LMX1BO60663 AC073522.1-201ENST00000483312 377 ntBASIC3.97□□□□□ -1.77
LMX1BO60663 AC090013.1-201ENST00000485147 480 ntBASIC3.97□□□□□ -1.77
LMX1BO60663 ARL4AP1-201ENST00000503220 705 ntBASIC3.97□□□□□ -1.77
LMX1BO60663 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC3.97□□□□□ -1.77
LMX1BO60663 TCP11X3P-202ENST00000514289 1254 ntBASIC3.97□□□□□ -1.77
LMX1BO60663 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC3.97□□□□□ -1.77
LMX1BO60663 NDUFA5P2-201ENST00000519723 344 ntBASIC3.97□□□□□ -1.77
LMX1BO60663 AC022880.1-201ENST00000534017 973 ntBASIC3.97□□□□□ -1.77
LMX1BO60663 AC008083.2-201ENST00000546707 476 ntBASIC3.97□□□□□ -1.77
LMX1BO60663 AKIRIN1P1-201ENST00000547384 544 ntBASIC3.97□□□□□ -1.77
LMX1BO60663 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC3.97□□□□□ -1.77
LMX1BO60663 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC3.97□□□□□ -1.77
LMX1BO60663 ACTR3BP3-201ENST00000565577 979 ntBASIC3.97□□□□□ -1.77
LMX1BO60663 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC3.97□□□□□ -1.77
LMX1BO60663 MIR1254-2-201ENST00000579553 63 ntBASIC3.97□□□□□ -1.77
LMX1BO60663 AC233702.9-201ENST00000581528 203 ntBASIC3.97□□□□□ -1.77
LMX1BO60663 AC069061.3-201ENST00000582254 823 ntBASIC3.97□□□□□ -1.77
LMX1BO60663 MIR548Y-201ENST00000582739 110 ntBASIC3.97□□□□□ -1.77
LMX1BO60663 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC3.97□□□□□ -1.77
LMX1BO60663 VN1R82P-201ENST00000601481 356 ntBASIC3.97□□□□□ -1.77
LMX1BO60663 DEFB131E-202ENST00000602581 683 ntBASIC3.97□□□□□ -1.77
LMX1BO60663 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC3.97□□□□□ -1.77
LMX1BO60663 AC090181.2-201ENST00000602975 672 ntBASIC3.97□□□□□ -1.77
LMX1BO60663 AC073091.2-201ENST00000603205 907 ntBASIC3.97□□□□□ -1.77
LMX1BO60663 AC005191.1-201ENST00000603950 358 ntBASIC3.97□□□□□ -1.77
LMX1BO60663 AC008966.2-201ENST00000606157 453 ntBASIC3.97□□□□□ -1.77
LMX1BO60663 RN7SKP299-201ENST00000606679 301 ntBASIC3.97□□□□□ -1.77
LMX1BO60663 AL451074.6-201ENST00000608512 729 ntBASIC3.97□□□□□ -1.77
LMX1BO60663 AC073114.1-201ENST00000612027 490 ntBASIC3.97□□□□□ -1.77
LMX1BO60663 AC023509.5-201ENST00000617434 807 ntBASIC3.97□□□□□ -1.77
LMX1BO60663 AK6-205ENST00000618980 483 ntTSL 2 BASIC3.97□□□□□ -1.77
LMX1BO60663 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC3.97□□□□□ -1.77
LMX1BO60663 AC022509.4-201ENST00000621404 572 ntBASIC3.97□□□□□ -1.77
LMX1BO60663 AF246928.1-201ENST00000623768 87 ntBASIC3.97□□□□□ -1.77
LMX1BO60663 AC068724.3-201ENST00000625906 87 ntBASIC3.97□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 115.9 ms