Protein–RNA interactions for Protein: O43556

SGCE, Epsilon-sarcoglycan, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGCEO43556 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.34□□□□□ -1.87
SGCEO43556 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
SGCEO43556 SNORA31-201ENST00000362607 130 ntBASIC3.34□□□□□ -1.87
SGCEO43556 RNA5SP391-201ENST00000363456 119 ntBASIC3.34□□□□□ -1.87
SGCEO43556 RNA5SP189-201ENST00000364920 115 ntBASIC3.34□□□□□ -1.87
SGCEO43556 RNA5SP283-201ENST00000365604 119 ntBASIC3.34□□□□□ -1.87
SGCEO43556 RAB28P1-201ENST00000411517 641 ntBASIC3.34□□□□□ -1.87
SGCEO43556 Z74696.2-201ENST00000436514 498 ntBASIC3.34□□□□□ -1.87
SGCEO43556 RPL29P29-201ENST00000448725 423 ntBASIC3.34□□□□□ -1.87
SGCEO43556 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
SGCEO43556 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC3.34□□□□□ -1.87
SGCEO43556 OR9M1P-201ENST00000459641 921 ntBASIC3.34□□□□□ -1.87
SGCEO43556 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC3.34□□□□□ -1.87
SGCEO43556 AP002884.2-201ENST00000471647 395 ntBASIC3.34□□□□□ -1.87
SGCEO43556 AC084198.1-201ENST00000477747 402 ntBASIC3.34□□□□□ -1.87
SGCEO43556 TRBV12-2-201ENST00000489763 344 ntBASIC3.34□□□□□ -1.87
SGCEO43556 AC078918.1-201ENST00000498515 228 ntBASIC3.34□□□□□ -1.87
SGCEO43556 AC108941.1-201ENST00000502853 530 ntBASIC3.34□□□□□ -1.87
SGCEO43556 AC111193.1-201ENST00000504097 155 ntBASIC3.34□□□□□ -1.87
SGCEO43556 AC022695.1-201ENST00000522089 237 ntBASIC3.34□□□□□ -1.87
SGCEO43556 EQTN-204ENST00000537675 879 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.87
SGCEO43556 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC3.34□□□□□ -1.87
SGCEO43556 AC084033.1-201ENST00000550830 633 ntBASIC3.34□□□□□ -1.87
SGCEO43556 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC3.34□□□□□ -1.87
SGCEO43556 AC007224.1-201ENST00000564410 144 ntBASIC3.34□□□□□ -1.87
SGCEO43556 AC130650.1-201ENST00000570581 415 ntTSL 2 BASIC3.34□□□□□ -1.87
SGCEO43556 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC3.34□□□□□ -1.87
SGCEO43556 AC107419.1-202ENST00000608735 1081 ntTSL 3 BASIC3.34□□□□□ -1.87
SGCEO43556 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.87
SGCEO43556 MIR8058-201ENST00000615737 89 ntBASIC3.34□□□□□ -1.87
SGCEO43556 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
SGCEO43556 AC091905.1-201ENST00000624400 311 ntBASIC3.34□□□□□ -1.87
SGCEO43556 RNA5SP196-201ENST00000625967 102 ntBASIC3.34□□□□□ -1.87
SGCEO43556 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC3.34□□□□□ -1.87
SGCEO43556 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
SGCEO43556 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
SGCEO43556 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.88
SGCEO43556 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
SGCEO43556 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC3.33□□□□□ -1.88
SGCEO43556 CR381670.1-201ENST00000624291 1693 ntBASIC3.33□□□□□ -1.88
SGCEO43556 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
SGCEO43556 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC3.33□□□□□ -1.88
SGCEO43556 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.33□□□□□ -1.88
SGCEO43556 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
SGCEO43556 MIR421-201ENST00000365696 85 ntBASIC3.33□□□□□ -1.88
SGCEO43556 RNU6-213P-201ENST00000384051 104 ntBASIC3.33□□□□□ -1.88
SGCEO43556 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
SGCEO43556 DNAJC19P6-201ENST00000401853 280 ntBASIC3.33□□□□□ -1.88
SGCEO43556 HSPE1P26-201ENST00000405341 275 ntBASIC3.33□□□□□ -1.88
SGCEO43556 PPIAP31-201ENST00000405422 495 ntBASIC3.33□□□□□ -1.88
SGCEO43556 LINC01881-201ENST00000416103 412 ntBASIC3.33□□□□□ -1.88
SGCEO43556 RPL31P12-201ENST00000422587 358 ntBASIC3.33□□□□□ -1.88
SGCEO43556 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC3.33□□□□□ -1.88
SGCEO43556 HIGD1AP12-201ENST00000427832 281 ntBASIC3.33□□□□□ -1.88
SGCEO43556 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
SGCEO43556 AL161747.1-201ENST00000480068 358 ntBASIC3.33□□□□□ -1.88
SGCEO43556 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
SGCEO43556 OR8L1P-201ENST00000534005 955 ntBASIC3.33□□□□□ -1.88
SGCEO43556 CYCSP30-201ENST00000546447 172 ntBASIC3.33□□□□□ -1.88
SGCEO43556 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
SGCEO43556 AC074029.2-201ENST00000551045 634 ntBASIC3.33□□□□□ -1.88
SGCEO43556 AL121594.4-201ENST00000556211 1196 ntBASIC3.33□□□□□ -1.88
SGCEO43556 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC3.33□□□□□ -1.88
SGCEO43556 ZNF192P1-203ENST00000565888 810 ntBASIC3.33□□□□□ -1.88
SGCEO43556 MIR4286-201ENST00000580651 93 ntBASIC3.33□□□□□ -1.88
SGCEO43556 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC3.33□□□□□ -1.88
SGCEO43556 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC3.33□□□□□ -1.88
SGCEO43556 AC021517.1-203ENST00000590257 421 ntTSL 3 BASIC3.33□□□□□ -1.88
SGCEO43556 BRDTP1-201ENST00000605735 677 ntBASIC3.33□□□□□ -1.88
SGCEO43556 RMST_8.1-201ENST00000610287 165 ntBASIC3.33□□□□□ -1.88
SGCEO43556 MIR6875-201ENST00000617506 72 ntBASIC3.33□□□□□ -1.88
SGCEO43556 AP004607.9-201ENST00000618202 316 ntBASIC3.33□□□□□ -1.88
SGCEO43556 AC018816.2-201ENST00000621460 353 ntBASIC3.33□□□□□ -1.88
SGCEO43556 AL359094.1-201ENST00000627944 566 ntTSL 5 BASIC3.33□□□□□ -1.88
SGCEO43556 MIR4496-201ENST00000635896 61 ntBASIC3.33□□□□□ -1.88
SGCEO43556 PHF11-215ENST00000488958 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
SGCEO43556 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
SGCEO43556 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
SGCEO43556 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.33□□□□□ -1.88
SGCEO43556 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
SGCEO43556 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
SGCEO43556 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
SGCEO43556 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
SGCEO43556 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
SGCEO43556 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
SGCEO43556 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC3.32□□□□□ -1.88
SGCEO43556 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.32□□□□□ -1.88
SGCEO43556 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
SGCEO43556 HMGB1P10-201ENST00000395823 563 ntBASIC3.32□□□□□ -1.88
SGCEO43556 SNORA3.3-201ENST00000408712 125 ntBASIC3.32□□□□□ -1.88
SGCEO43556 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC3.32□□□□□ -1.88
SGCEO43556 AL356806.1-201ENST00000422524 916 ntBASIC3.32□□□□□ -1.88
SGCEO43556 TEX41-204ENST00000423031 491 ntTSL 4 BASIC3.32□□□□□ -1.88
SGCEO43556 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC3.32□□□□□ -1.88
SGCEO43556 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
SGCEO43556 AC004975.1-201ENST00000428733 208 ntBASIC3.32□□□□□ -1.88
SGCEO43556 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC3.32□□□□□ -1.88
SGCEO43556 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.32□□□□□ -1.88
SGCEO43556 TPTE2P6-202ENST00000445572 1007 ntBASIC3.32□□□□□ -1.88
SGCEO43556 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC3.32□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 111.2 ms