Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 SLC10A5P1-201ENST00000379063 1306 ntBASIC4.89□□□□□ -1.63
TRIM38O00635 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC4.89□□□□□ -1.63
TRIM38O00635 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
TRIM38O00635 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC4.89□□□□□ -1.63
TRIM38O00635 AC099654.2-201ENST00000433031 1980 ntBASIC4.89□□□□□ -1.63
TRIM38O00635 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
TRIM38O00635 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC4.89□□□□□ -1.63
TRIM38O00635 DDX18P3-201ENST00000404856 2007 ntBASIC4.89□□□□□ -1.63
TRIM38O00635 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC4.89□□□□□ -1.63
TRIM38O00635 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
TRIM38O00635 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC4.88□□□□□ -1.63
TRIM38O00635 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
TRIM38O00635 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC4.88□□□□□ -1.63
TRIM38O00635 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC4.88□□□□□ -1.63
TRIM38O00635 OFD1P5Y-201ENST00000447585 2590 ntBASIC4.88□□□□□ -1.63
TRIM38O00635 SALL4P2-201ENST00000423288 2910 ntBASIC4.88□□□□□ -1.63
TRIM38O00635 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC4.88□□□□□ -1.63
TRIM38O00635 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
TRIM38O00635 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC4.88□□□□□ -1.63
TRIM38O00635 Y_RNA.194-201ENST00000363985 102 ntBASIC4.88□□□□□ -1.63
TRIM38O00635 RNU6-621P-201ENST00000364752 109 ntBASIC4.88□□□□□ -1.63
TRIM38O00635 SNORA2.3-201ENST00000383920 135 ntBASIC4.88□□□□□ -1.63
TRIM38O00635 IL6-206ENST00000407492 926 ntTSL 3 BASIC4.88□□□□□ -1.63
TRIM38O00635 NUP35P2-201ENST00000416748 943 ntBASIC4.88□□□□□ -1.63
TRIM38O00635 RPS3AP9-201ENST00000417027 792 ntBASIC4.88□□□□□ -1.63
TRIM38O00635 USP9YP26-201ENST00000421008 661 ntBASIC4.88□□□□□ -1.63
TRIM38O00635 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC4.88□□□□□ -1.63
TRIM38O00635 DNAJC19P7-201ENST00000428811 344 ntBASIC4.88□□□□□ -1.63
TRIM38O00635 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC4.88□□□□□ -1.63
TRIM38O00635 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC4.88□□□□□ -1.63
TRIM38O00635 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC4.88□□□□□ -1.63
TRIM38O00635 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC4.88□□□□□ -1.63
TRIM38O00635 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC4.88□□□□□ -1.63
TRIM38O00635 AC006967.1-201ENST00000467608 589 ntBASIC4.88□□□□□ -1.63
TRIM38O00635 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC4.88□□□□□ -1.63
TRIM38O00635 ACTG1P13-201ENST00000486987 1043 ntBASIC4.88□□□□□ -1.63
TRIM38O00635 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC4.88□□□□□ -1.63
TRIM38O00635 HMGB1P21-201ENST00000502313 581 ntBASIC4.88□□□□□ -1.63
TRIM38O00635 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC4.88□□□□□ -1.63
TRIM38O00635 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC4.88□□□□□ -1.63
TRIM38O00635 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC4.88□□□□□ -1.63
TRIM38O00635 MTCYBP41-201ENST00000528913 1123 ntBASIC4.88□□□□□ -1.63
TRIM38O00635 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC4.88□□□□□ -1.63
TRIM38O00635 AC022880.1-201ENST00000534017 973 ntBASIC4.88□□□□□ -1.63
TRIM38O00635 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC4.88□□□□□ -1.63
TRIM38O00635 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC4.88□□□□□ -1.63
TRIM38O00635 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC4.88□□□□□ -1.63
TRIM38O00635 CYCSP40-201ENST00000575927 294 ntBASIC4.88□□□□□ -1.63
TRIM38O00635 OR4K7P-201ENST00000580232 945 ntBASIC4.88□□□□□ -1.63
TRIM38O00635 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC4.88□□□□□ -1.63
TRIM38O00635 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC4.88□□□□□ -1.63
TRIM38O00635 AL512782.1-201ENST00000603093 364 ntBASIC4.88□□□□□ -1.63
TRIM38O00635 AC020910.3-201ENST00000603701 874 ntBASIC4.88□□□□□ -1.63
TRIM38O00635 AC104687.2-201ENST00000604442 342 ntBASIC4.88□□□□□ -1.63
TRIM38O00635 AC121761.2-201ENST00000617300 689 ntBASIC4.88□□□□□ -1.63
TRIM38O00635 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
TRIM38O00635 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
TRIM38O00635 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC4.88□□□□□ -1.63
TRIM38O00635 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
TRIM38O00635 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
TRIM38O00635 AC107068.1-201ENST00000563286 4218 ntBASIC4.88□□□□□ -1.63
TRIM38O00635 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
TRIM38O00635 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
TRIM38O00635 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
TRIM38O00635 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
TRIM38O00635 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC4.87□□□□□ -1.63
TRIM38O00635 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
TRIM38O00635 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC4.87□□□□□ -1.63
TRIM38O00635 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC4.87□□□□□ -1.63
TRIM38O00635 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
TRIM38O00635 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
TRIM38O00635 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
TRIM38O00635 MIR506-201ENST00000384998 124 ntBASIC4.87□□□□□ -1.63
TRIM38O00635 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
TRIM38O00635 HSPD1P16-201ENST00000402302 394 ntBASIC4.87□□□□□ -1.63
TRIM38O00635 RPL23AP47-201ENST00000408017 460 ntBASIC4.87□□□□□ -1.63
TRIM38O00635 SNORA77-201ENST00000408716 125 ntBASIC4.87□□□□□ -1.63
TRIM38O00635 RN7SKP100-201ENST00000411258 284 ntBASIC4.87□□□□□ -1.63
TRIM38O00635 AL136133.1-201ENST00000413694 376 ntBASIC4.87□□□□□ -1.63
TRIM38O00635 AL161449.1-201ENST00000414531 1199 ntBASIC4.87□□□□□ -1.63
TRIM38O00635 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC4.87□□□□□ -1.63
TRIM38O00635 AC069213.2-201ENST00000420238 366 ntBASIC4.87□□□□□ -1.63
TRIM38O00635 COX6CP17-201ENST00000421389 185 ntBASIC4.87□□□□□ -1.63
TRIM38O00635 AL139421.1-201ENST00000423010 169 ntBASIC4.87□□□□□ -1.63
TRIM38O00635 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC4.87□□□□□ -1.63
TRIM38O00635 AC068287.1-201ENST00000430283 295 ntBASIC4.87□□□□□ -1.63
TRIM38O00635 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC4.87□□□□□ -1.63
TRIM38O00635 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC4.87□□□□□ -1.63
TRIM38O00635 AC004980.3-201ENST00000447046 365 ntBASIC4.87□□□□□ -1.63
TRIM38O00635 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC4.87□□□□□ -1.63
TRIM38O00635 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC4.87□□□□□ -1.63
TRIM38O00635 IFNWP4-201ENST00000453148 294 ntBASIC4.87□□□□□ -1.63
TRIM38O00635 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC4.87□□□□□ -1.63
TRIM38O00635 NECAP1P2-201ENST00000455668 727 ntBASIC4.87□□□□□ -1.63
TRIM38O00635 ATG12P2-201ENST00000456830 416 ntBASIC4.87□□□□□ -1.63
TRIM38O00635 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC4.87□□□□□ -1.63
TRIM38O00635 APOOP2-201ENST00000461561 539 ntBASIC4.87□□□□□ -1.63
TRIM38O00635 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC4.87□□□□□ -1.63
TRIM38O00635 AC011005.3-201ENST00000491624 395 ntBASIC4.87□□□□□ -1.63
TRIM38O00635 KRTAP5-14P-201ENST00000502328 121 ntBASIC4.87□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 86.8 ms