Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 AC091167.4-201ENST00000605079 184 ntBASIC1.86□□□□□ -2.11
CHKB-CPT1BH3BT56 AC108865.2-201ENST00000606881 432 ntBASIC1.86□□□□□ -2.11
CHKB-CPT1BH3BT56 RNA5SP440-201ENST00000612665 119 ntBASIC1.86□□□□□ -2.11
CHKB-CPT1BH3BT56 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC1.86□□□□□ -2.11
CHKB-CPT1BH3BT56 AL354976.1-201ENST00000613843 387 ntBASIC1.86□□□□□ -2.11
CHKB-CPT1BH3BT56 AC068831.7-201ENST00000616954 363 ntBASIC1.86□□□□□ -2.11
CHKB-CPT1BH3BT56 SNHG22-203ENST00000617833 660 ntBASIC1.86□□□□□ -2.11
CHKB-CPT1BH3BT56 AC073476.4-201ENST00000628409 72 ntBASIC1.86□□□□□ -2.11
CHKB-CPT1BH3BT56 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC1.86□□□□□ -2.11
CHKB-CPT1BH3BT56 AC090897.3-201ENST00000636973 1157 ntBASIC1.86□□□□□ -2.11
CHKB-CPT1BH3BT56 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC1.86□□□□□ -2.11
CHKB-CPT1BH3BT56 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC1.86□□□□□ -2.11
CHKB-CPT1BH3BT56 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
CHKB-CPT1BH3BT56 DYNAP-201ENST00000321600 2027 ntAPPRIS P3 TSL 2 BASIC1.86□□□□□ -2.11
CHKB-CPT1BH3BT56 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC1.86□□□□□ -2.11
CHKB-CPT1BH3BT56 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
CHKB-CPT1BH3BT56 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
CHKB-CPT1BH3BT56 GABRG2-229ENST00000641017 3628 ntBASIC1.86□□□□□ -2.11
CHKB-CPT1BH3BT56 AC017071.1-201ENST00000564407 2204 ntBASIC1.86□□□□□ -2.11
CHKB-CPT1BH3BT56 MTCO1P8-201ENST00000416914 1523 ntBASIC1.86□□□□□ -2.11
CHKB-CPT1BH3BT56 HSPA8P19-201ENST00000505359 1517 ntBASIC1.86□□□□□ -2.11
CHKB-CPT1BH3BT56 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC1.85□□□□□ -2.11
CHKB-CPT1BH3BT56 INTS6P1-201ENST00000504674 2530 ntBASIC1.85□□□□□ -2.11
CHKB-CPT1BH3BT56 CDY3P-201ENST00000454543 1618 ntBASIC1.85□□□□□ -2.11
CHKB-CPT1BH3BT56 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC1.85□□□□□ -2.11
CHKB-CPT1BH3BT56 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
CHKB-CPT1BH3BT56 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
CHKB-CPT1BH3BT56 MIR199A2-201ENST00000385289 110 ntBASIC1.85□□□□□ -2.11
CHKB-CPT1BH3BT56 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
CHKB-CPT1BH3BT56 AL138880.1-201ENST00000405824 642 ntBASIC1.85□□□□□ -2.11
CHKB-CPT1BH3BT56 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC1.85□□□□□ -2.11
CHKB-CPT1BH3BT56 HMGN2P35-201ENST00000412164 270 ntBASIC1.85□□□□□ -2.11
CHKB-CPT1BH3BT56 BX682237.1-201ENST00000415016 335 ntBASIC1.85□□□□□ -2.11
CHKB-CPT1BH3BT56 TOMM22P1-201ENST00000418578 312 ntBASIC1.85□□□□□ -2.11
CHKB-CPT1BH3BT56 NIPA2P1-201ENST00000426223 976 ntBASIC1.85□□□□□ -2.11
CHKB-CPT1BH3BT56 AC104837.2-201ENST00000427236 424 ntBASIC1.85□□□□□ -2.11
CHKB-CPT1BH3BT56 CKS1BP5-201ENST00000434172 273 ntBASIC1.85□□□□□ -2.11
CHKB-CPT1BH3BT56 NDUFB1P1-201ENST00000435191 180 ntBASIC1.85□□□□□ -2.11
CHKB-CPT1BH3BT56 CLNS1AP1-201ENST00000435954 682 ntBASIC1.85□□□□□ -2.11
CHKB-CPT1BH3BT56 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC1.85□□□□□ -2.11
CHKB-CPT1BH3BT56 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC1.85□□□□□ -2.11
CHKB-CPT1BH3BT56 RPS27AP2-201ENST00000457576 465 ntBASIC1.85□□□□□ -2.11
CHKB-CPT1BH3BT56 ANK3-207ENST00000460468 677 ntTSL 3 BASIC1.85□□□□□ -2.11
CHKB-CPT1BH3BT56 RPS23P7-201ENST00000466210 444 ntBASIC1.85□□□□□ -2.11
CHKB-CPT1BH3BT56 HMGB1P25-201ENST00000468402 607 ntBASIC1.85□□□□□ -2.11
CHKB-CPT1BH3BT56 AC078828.1-201ENST00000471993 458 ntTSL 3 BASIC1.85□□□□□ -2.11
CHKB-CPT1BH3BT56 AC023598.1-201ENST00000472521 361 ntBASIC1.85□□□□□ -2.11
CHKB-CPT1BH3BT56 AC021205.2-201ENST00000480069 347 ntBASIC1.85□□□□□ -2.11
CHKB-CPT1BH3BT56 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC1.85□□□□□ -2.11
CHKB-CPT1BH3BT56 AIG1P1-201ENST00000503376 148 ntBASIC1.85□□□□□ -2.11
CHKB-CPT1BH3BT56 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
CHKB-CPT1BH3BT56 RAC1P2-201ENST00000511164 579 ntBASIC1.85□□□□□ -2.11
CHKB-CPT1BH3BT56 MTCO2P32-201ENST00000514865 403 ntBASIC1.85□□□□□ -2.11
CHKB-CPT1BH3BT56 TBCA-203ENST00000517679 545 ntTSL 3 BASIC1.85□□□□□ -2.11
CHKB-CPT1BH3BT56 AC022695.1-201ENST00000522089 237 ntBASIC1.85□□□□□ -2.11
CHKB-CPT1BH3BT56 AC008033.2-201ENST00000542626 177 ntBASIC1.85□□□□□ -2.11
CHKB-CPT1BH3BT56 REXO2-218ENST00000544827 880 ntTSL 3 BASIC1.85□□□□□ -2.11
CHKB-CPT1BH3BT56 AC068768.1-204ENST00000544890 796 ntTSL 4 BASIC1.85□□□□□ -2.11
CHKB-CPT1BH3BT56 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC1.85□□□□□ -2.11
CHKB-CPT1BH3BT56 AC091042.1-201ENST00000579213 173 ntBASIC1.85□□□□□ -2.11
CHKB-CPT1BH3BT56 AC022884.3-201ENST00000579571 248 ntBASIC1.85□□□□□ -2.11
CHKB-CPT1BH3BT56 AC138207.8-204ENST00000579588 527 ntBASIC1.85□□□□□ -2.11
CHKB-CPT1BH3BT56 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC1.85□□□□□ -2.11
CHKB-CPT1BH3BT56 MIR4715-201ENST00000584117 79 ntBASIC1.85□□□□□ -2.11
CHKB-CPT1BH3BT56 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC1.85□□□□□ -2.11
CHKB-CPT1BH3BT56 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
CHKB-CPT1BH3BT56 AC006116.9-203ENST00000591036 566 ntTSL 4 BASIC1.85□□□□□ -2.11
CHKB-CPT1BH3BT56 AC020915.5-201ENST00000596836 964 ntBASIC1.85□□□□□ -2.11
CHKB-CPT1BH3BT56 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC1.85□□□□□ -2.11
CHKB-CPT1BH3BT56 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC1.85□□□□□ -2.11
CHKB-CPT1BH3BT56 AC113368.1-201ENST00000603736 382 ntBASIC1.85□□□□□ -2.11
CHKB-CPT1BH3BT56 AC112230.1-201ENST00000604342 547 ntBASIC1.85□□□□□ -2.11
CHKB-CPT1BH3BT56 AC006077.1-201ENST00000604746 343 ntBASIC1.85□□□□□ -2.11
CHKB-CPT1BH3BT56 MUC1-221ENST00000610359 1101 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
CHKB-CPT1BH3BT56 MIR6868-201ENST00000611215 58 ntBASIC1.85□□□□□ -2.11
CHKB-CPT1BH3BT56 MUC1-227ENST00000615517 951 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
CHKB-CPT1BH3BT56 MIR6071-201ENST00000616741 78 ntBASIC1.85□□□□□ -2.11
CHKB-CPT1BH3BT56 AC126175.1-201ENST00000617041 758 ntBASIC1.85□□□□□ -2.11
CHKB-CPT1BH3BT56 AC002044.3-201ENST00000623314 541 ntBASIC1.85□□□□□ -2.11
CHKB-CPT1BH3BT56 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC1.85□□□□□ -2.11
CHKB-CPT1BH3BT56 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC1.85□□□□□ -2.11
CHKB-CPT1BH3BT56 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC1.85□□□□□ -2.11
CHKB-CPT1BH3BT56 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC1.85□□□□□ -2.11
CHKB-CPT1BH3BT56 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC1.85□□□□□ -2.11
CHKB-CPT1BH3BT56 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC1.85□□□□□ -2.11
CHKB-CPT1BH3BT56 AF117829.1-206ENST00000621883 3802 ntBASIC1.85□□□□□ -2.11
CHKB-CPT1BH3BT56 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC1.85□□□□□ -2.11
CHKB-CPT1BH3BT56 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
CHKB-CPT1BH3BT56 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.11
CHKB-CPT1BH3BT56 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.11
CHKB-CPT1BH3BT56 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
CHKB-CPT1BH3BT56 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC1.84□□□□□ -2.11
CHKB-CPT1BH3BT56 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC1.84□□□□□ -2.11
CHKB-CPT1BH3BT56 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
CHKB-CPT1BH3BT56 MIR323A-201ENST00000362199 86 ntBASIC1.84□□□□□ -2.11
CHKB-CPT1BH3BT56 RNU1-70P-201ENST00000362618 164 ntBASIC1.84□□□□□ -2.11
CHKB-CPT1BH3BT56 SNORD56.5-201ENST00000364281 72 ntBASIC1.84□□□□□ -2.11
CHKB-CPT1BH3BT56 CD24P4-201ENST00000382840 243 ntBASIC1.84□□□□□ -2.11
CHKB-CPT1BH3BT56 SNORA46-201ENST00000384762 135 ntBASIC1.84□□□□□ -2.11
CHKB-CPT1BH3BT56 SEPT7P2-202ENST00000398921 823 ntBASIC1.84□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 93.6 ms