Protein–RNA interactions for Protein: E9PL57

NEDD8-MDP1, NEDD8-MDP1 readthrough (Fragment), humanhuman

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1E9PL57 MIR4444-2-201ENST00000584390 74 ntBASIC3.99□□□□□ -1.77
NEDD8-MDP1E9PL57 AC006116.7-201ENST00000590141 756 ntBASIC3.99□□□□□ -1.77
NEDD8-MDP1E9PL57 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC3.99□□□□□ -1.77
NEDD8-MDP1E9PL57 AC116447.1-201ENST00000613153 453 ntBASIC3.99□□□□□ -1.77
NEDD8-MDP1E9PL57 LYRM2-211ENST00000626778 696 ntTSL 5 BASIC3.99□□□□□ -1.77
NEDD8-MDP1E9PL57 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC3.99□□□□□ -1.77
NEDD8-MDP1E9PL57 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
NEDD8-MDP1E9PL57 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC3.99□□□□□ -1.77
NEDD8-MDP1E9PL57 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
NEDD8-MDP1E9PL57 AC097504.1-201ENST00000515103 2415 ntBASIC3.99□□□□□ -1.77
NEDD8-MDP1E9PL57 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
NEDD8-MDP1E9PL57 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC3.98□□□□□ -1.77
NEDD8-MDP1E9PL57 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
NEDD8-MDP1E9PL57 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.98□□□□□ -1.77
NEDD8-MDP1E9PL57 AL451142.2-201ENST00000429076 2090 ntBASIC3.98□□□□□ -1.77
NEDD8-MDP1E9PL57 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
NEDD8-MDP1E9PL57 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC3.98□□□□□ -1.77
NEDD8-MDP1E9PL57 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
NEDD8-MDP1E9PL57 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
NEDD8-MDP1E9PL57 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
NEDD8-MDP1E9PL57 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC3.98□□□□□ -1.77
NEDD8-MDP1E9PL57 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC3.98□□□□□ -1.77
NEDD8-MDP1E9PL57 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
NEDD8-MDP1E9PL57 U1.1-201ENST00000384101 164 ntBASIC3.98□□□□□ -1.77
NEDD8-MDP1E9PL57 RNU6-1257P-201ENST00000384625 110 ntBASIC3.98□□□□□ -1.77
NEDD8-MDP1E9PL57 U8.11-201ENST00000384699 133 ntBASIC3.98□□□□□ -1.77
NEDD8-MDP1E9PL57 U8.12-201ENST00000384701 133 ntBASIC3.98□□□□□ -1.77
NEDD8-MDP1E9PL57 AP002784.2-201ENST00000397300 549 ntBASIC3.98□□□□□ -1.77
NEDD8-MDP1E9PL57 AL355143.1-201ENST00000407101 841 ntBASIC3.98□□□□□ -1.77
NEDD8-MDP1E9PL57 RNA5SP39-201ENST00000411245 120 ntBASIC3.98□□□□□ -1.77
NEDD8-MDP1E9PL57 AL024507.1-201ENST00000412741 274 ntBASIC3.98□□□□□ -1.77
NEDD8-MDP1E9PL57 AC069157.1-201ENST00000421749 137 ntBASIC3.98□□□□□ -1.77
NEDD8-MDP1E9PL57 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC3.98□□□□□ -1.77
NEDD8-MDP1E9PL57 RPS26P47-201ENST00000427219 348 ntBASIC3.98□□□□□ -1.77
NEDD8-MDP1E9PL57 AL451062.2-201ENST00000427515 271 ntBASIC3.98□□□□□ -1.77
NEDD8-MDP1E9PL57 OR4F13P-201ENST00000428478 931 ntBASIC3.98□□□□□ -1.77
NEDD8-MDP1E9PL57 NANOGP6-201ENST00000429190 847 ntBASIC3.98□□□□□ -1.77
NEDD8-MDP1E9PL57 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC3.98□□□□□ -1.77
NEDD8-MDP1E9PL57 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC3.98□□□□□ -1.77
NEDD8-MDP1E9PL57 AL096803.2-201ENST00000450032 677 ntBASIC3.98□□□□□ -1.77
NEDD8-MDP1E9PL57 AL451050.1-201ENST00000450126 415 ntBASIC3.98□□□□□ -1.77
NEDD8-MDP1E9PL57 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC3.98□□□□□ -1.77
NEDD8-MDP1E9PL57 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
NEDD8-MDP1E9PL57 U8.18-201ENST00000459285 133 ntBASIC3.98□□□□□ -1.77
NEDD8-MDP1E9PL57 ANK3-207ENST00000460468 677 ntTSL 3 BASIC3.98□□□□□ -1.77
NEDD8-MDP1E9PL57 RPL7P15-201ENST00000461190 712 ntBASIC3.98□□□□□ -1.77
NEDD8-MDP1E9PL57 AC104687.1-201ENST00000485829 412 ntBASIC3.98□□□□□ -1.77
NEDD8-MDP1E9PL57 AC111193.1-201ENST00000504097 155 ntBASIC3.98□□□□□ -1.77
NEDD8-MDP1E9PL57 AC025554.1-201ENST00000505641 188 ntBASIC3.98□□□□□ -1.77
NEDD8-MDP1E9PL57 SCARNA14-201ENST00000516903 136 ntBASIC3.98□□□□□ -1.77
NEDD8-MDP1E9PL57 PAICSP4-201ENST00000517543 1253 ntBASIC3.98□□□□□ -1.77
NEDD8-MDP1E9PL57 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC3.98□□□□□ -1.77
NEDD8-MDP1E9PL57 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC3.98□□□□□ -1.77
NEDD8-MDP1E9PL57 AC104115.2-201ENST00000523026 687 ntBASIC3.98□□□□□ -1.77
NEDD8-MDP1E9PL57 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC3.98□□□□□ -1.77
NEDD8-MDP1E9PL57 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
NEDD8-MDP1E9PL57 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC3.98□□□□□ -1.77
NEDD8-MDP1E9PL57 GNRHR2P1-201ENST00000555315 631 ntBASIC3.98□□□□□ -1.77
NEDD8-MDP1E9PL57 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC3.98□□□□□ -1.77
NEDD8-MDP1E9PL57 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC3.98□□□□□ -1.77
NEDD8-MDP1E9PL57 AC096586.1-201ENST00000610267 561 ntBASIC3.98□□□□□ -1.77
NEDD8-MDP1E9PL57 AP000255.1-201ENST00000610276 676 ntBASIC3.98□□□□□ -1.77
NEDD8-MDP1E9PL57 AC005156.1-201ENST00000613371 573 ntBASIC3.98□□□□□ -1.77
NEDD8-MDP1E9PL57 STMN1P1-201ENST00000617809 440 ntBASIC3.98□□□□□ -1.77
NEDD8-MDP1E9PL57 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC3.98□□□□□ -1.77
NEDD8-MDP1E9PL57 AL049777.1-201ENST00000622740 518 ntBASIC3.98□□□□□ -1.77
NEDD8-MDP1E9PL57 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC3.98□□□□□ -1.77
NEDD8-MDP1E9PL57 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC3.98□□□□□ -1.77
NEDD8-MDP1E9PL57 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC3.98□□□□□ -1.77
NEDD8-MDP1E9PL57 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC3.98□□□□□ -1.77
NEDD8-MDP1E9PL57 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
NEDD8-MDP1E9PL57 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC3.98□□□□□ -1.77
NEDD8-MDP1E9PL57 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
NEDD8-MDP1E9PL57 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
NEDD8-MDP1E9PL57 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
NEDD8-MDP1E9PL57 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3.97□□□□□ -1.77
NEDD8-MDP1E9PL57 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
NEDD8-MDP1E9PL57 ZNF285B-201ENST00000561698 1767 ntBASIC3.97□□□□□ -1.77
NEDD8-MDP1E9PL57 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
NEDD8-MDP1E9PL57 ENSAP3-201ENST00000312710 333 ntBASIC3.97□□□□□ -1.77
NEDD8-MDP1E9PL57 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC3.97□□□□□ -1.77
NEDD8-MDP1E9PL57 RNU6-468P-201ENST00000384003 109 ntBASIC3.97□□□□□ -1.77
NEDD8-MDP1E9PL57 MIR3074-201ENST00000384885 81 ntBASIC3.97□□□□□ -1.77
NEDD8-MDP1E9PL57 RNU6-603P-201ENST00000411403 107 ntBASIC3.97□□□□□ -1.77
NEDD8-MDP1E9PL57 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC3.97□□□□□ -1.77
NEDD8-MDP1E9PL57 AC092647.1-201ENST00000420654 287 ntBASIC3.97□□□□□ -1.77
NEDD8-MDP1E9PL57 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
NEDD8-MDP1E9PL57 AC015971.1-204ENST00000424788 1147 ntTSL 5 BASIC3.97□□□□□ -1.77
NEDD8-MDP1E9PL57 DEFB130D-201ENST00000426866 237 ntBASIC3.97□□□□□ -1.77
NEDD8-MDP1E9PL57 AL591419.1-201ENST00000427423 339 ntBASIC3.97□□□□□ -1.77
NEDD8-MDP1E9PL57 NPM1P34-201ENST00000428821 893 ntBASIC3.97□□□□□ -1.77
NEDD8-MDP1E9PL57 HSFY7P-201ENST00000432672 318 ntBASIC3.97□□□□□ -1.77
NEDD8-MDP1E9PL57 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC3.97□□□□□ -1.77
NEDD8-MDP1E9PL57 AL031663.1-201ENST00000437445 219 ntBASIC3.97□□□□□ -1.77
NEDD8-MDP1E9PL57 HSFY8P-201ENST00000437934 318 ntBASIC3.97□□□□□ -1.77
NEDD8-MDP1E9PL57 HMGB1P37-201ENST00000439613 609 ntBASIC3.97□□□□□ -1.77
NEDD8-MDP1E9PL57 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
NEDD8-MDP1E9PL57 AC068135.1-201ENST00000446164 246 ntBASIC3.97□□□□□ -1.77
NEDD8-MDP1E9PL57 NDUFS5P3-201ENST00000450668 321 ntBASIC3.97□□□□□ -1.77
NEDD8-MDP1E9PL57 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC3.97□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms