Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 Y_RNA.145-201ENST00000363527 102 ntBASIC5.2□□□□□ -1.58
SHISA3A0PJX4 RNU105B-201ENST00000364478 208 ntBASIC5.2□□□□□ -1.58
SHISA3A0PJX4 Y_RNA.367-201ENST00000365544 101 ntBASIC5.2□□□□□ -1.58
SHISA3A0PJX4 RNU6-43P-201ENST00000384302 107 ntBASIC5.2□□□□□ -1.58
SHISA3A0PJX4 SNORA7A-201ENST00000384765 139 ntBASIC5.2□□□□□ -1.58
SHISA3A0PJX4 MIR92A2-201ENST00000385299 75 ntBASIC5.2□□□□□ -1.58
SHISA3A0PJX4 Y_RNA.579-201ENST00000390939 94 ntBASIC5.2□□□□□ -1.58
SHISA3A0PJX4 AC026310.1-201ENST00000396004 378 ntBASIC5.2□□□□□ -1.58
SHISA3A0PJX4 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
SHISA3A0PJX4 AC234779.1-201ENST00000425910 285 ntBASIC5.2□□□□□ -1.58
SHISA3A0PJX4 LYPLA1P1-201ENST00000434514 622 ntBASIC5.2□□□□□ -1.58
SHISA3A0PJX4 TIMM9P1-201ENST00000436122 256 ntBASIC5.2□□□□□ -1.58
SHISA3A0PJX4 AC012075.1-201ENST00000436549 580 ntBASIC5.2□□□□□ -1.58
SHISA3A0PJX4 UBE2V1P13-201ENST00000436983 439 ntBASIC5.2□□□□□ -1.58
SHISA3A0PJX4 AC234771.4-201ENST00000441416 730 ntBASIC5.2□□□□□ -1.58
SHISA3A0PJX4 AC092168.1-201ENST00000443030 236 ntTSL 5 BASIC5.2□□□□□ -1.58
SHISA3A0PJX4 COX4I1P2-201ENST00000447446 547 ntBASIC5.2□□□□□ -1.58
SHISA3A0PJX4 AC009518.1-201ENST00000452219 559 ntTSL 4 BASIC5.2□□□□□ -1.58
SHISA3A0PJX4 AC073476.1-201ENST00000452854 407 ntBASIC5.2□□□□□ -1.58
SHISA3A0PJX4 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC5.2□□□□□ -1.58
SHISA3A0PJX4 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC5.2□□□□□ -1.58
SHISA3A0PJX4 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC5.2□□□□□ -1.58
SHISA3A0PJX4 Y_RNA.631-201ENST00000459607 101 ntBASIC5.2□□□□□ -1.58
SHISA3A0PJX4 AC006512.1-201ENST00000468816 291 ntBASIC5.2□□□□□ -1.58
SHISA3A0PJX4 RN7SL790P-201ENST00000474043 298 ntBASIC5.2□□□□□ -1.58
SHISA3A0PJX4 GM2AP2-201ENST00000491764 562 ntBASIC5.2□□□□□ -1.58
SHISA3A0PJX4 RN7SL350P-201ENST00000492591 299 ntBASIC5.2□□□□□ -1.58
SHISA3A0PJX4 AC010181.1-202ENST00000509191 798 ntTSL 3 BASIC5.2□□□□□ -1.58
SHISA3A0PJX4 RNA5SP434-201ENST00000516647 121 ntBASIC5.2□□□□□ -1.58
SHISA3A0PJX4 LINC00967-201ENST00000517689 792 ntTSL 5 BASIC5.2□□□□□ -1.58
SHISA3A0PJX4 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC5.2□□□□□ -1.58
SHISA3A0PJX4 AL137224.1-201ENST00000527984 389 ntTSL 2 BASIC5.2□□□□□ -1.58
SHISA3A0PJX4 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC5.2□□□□□ -1.58
SHISA3A0PJX4 ELOCP31-201ENST00000540463 467 ntBASIC5.2□□□□□ -1.58
SHISA3A0PJX4 NCAPGP2-201ENST00000557911 754 ntBASIC5.2□□□□□ -1.58
SHISA3A0PJX4 RPL21P12-201ENST00000559810 515 ntBASIC5.2□□□□□ -1.58
SHISA3A0PJX4 AP3S2-214ENST00000560940 519 ntTSL 5 BASIC5.2□□□□□ -1.58
SHISA3A0PJX4 AC060771.1-201ENST00000582031 164 ntBASIC5.2□□□□□ -1.58
SHISA3A0PJX4 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC5.2□□□□□ -1.58
SHISA3A0PJX4 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC5.2□□□□□ -1.58
SHISA3A0PJX4 AC011516.1-201ENST00000599129 180 ntTSL 3 BASIC5.2□□□□□ -1.58
SHISA3A0PJX4 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC5.2□□□□□ -1.58
SHISA3A0PJX4 AL132655.1-201ENST00000601795 1153 ntTSL 3 BASIC5.2□□□□□ -1.58
SHISA3A0PJX4 AC012175.1-201ENST00000603755 531 ntBASIC5.2□□□□□ -1.58
SHISA3A0PJX4 AC010424.2-201ENST00000607594 443 ntBASIC5.2□□□□□ -1.58
SHISA3A0PJX4 MUC1-221ENST00000610359 1101 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
SHISA3A0PJX4 MUC1-227ENST00000615517 951 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
SHISA3A0PJX4 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
SHISA3A0PJX4 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC5.2□□□□□ -1.58
SHISA3A0PJX4 AC009313.2-201ENST00000417893 1941 ntBASIC5.2□□□□□ -1.58
SHISA3A0PJX4 MDM4-216ENST00000616250 9597 ntTSL 5 BASIC5.2□□□□□ -1.58
SHISA3A0PJX4 PSD3-219ENST00000614430 6136 ntTSL 5 BASIC5.2□□□□□ -1.58
SHISA3A0PJX4 MTND5P28-201ENST00000438005 1594 ntBASIC5.2□□□□□ -1.58
SHISA3A0PJX4 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
SHISA3A0PJX4 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC5.2□□□□□ -1.58
SHISA3A0PJX4 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC5.2□□□□□ -1.58
SHISA3A0PJX4 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
SHISA3A0PJX4 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC5.2□□□□□ -1.58
SHISA3A0PJX4 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC5.19□□□□□ -1.58
SHISA3A0PJX4 AC097461.1-201ENST00000568928 2821 ntBASIC5.19□□□□□ -1.58
SHISA3A0PJX4 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC5.19□□□□□ -1.58
SHISA3A0PJX4 AL606537.1-201ENST00000607258 2011 ntBASIC5.19□□□□□ -1.58
SHISA3A0PJX4 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC5.19□□□□□ -1.58
SHISA3A0PJX4 RFTN2-201ENST00000295049 5827 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
SHISA3A0PJX4 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC5.19□□□□□ -1.58
SHISA3A0PJX4 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC5.19□□□□□ -1.58
SHISA3A0PJX4 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC5.19□□□□□ -1.58
SHISA3A0PJX4 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC5.19□□□□□ -1.58
SHISA3A0PJX4 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC5.19□□□□□ -1.58
SHISA3A0PJX4 AP005435.3-201ENST00000531260 3198 ntBASIC5.19□□□□□ -1.58
SHISA3A0PJX4 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
SHISA3A0PJX4 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
SHISA3A0PJX4 DDX47-201ENST00000352940 1698 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
SHISA3A0PJX4 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
SHISA3A0PJX4 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC5.19□□□□□ -1.58
SHISA3A0PJX4 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
SHISA3A0PJX4 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC5.19□□□□□ -1.58
SHISA3A0PJX4 SNORA5.1-201ENST00000384275 131 ntBASIC5.19□□□□□ -1.58
SHISA3A0PJX4 RNU6-1297P-201ENST00000384415 104 ntBASIC5.19□□□□□ -1.58
SHISA3A0PJX4 MIR454-201ENST00000390180 115 ntBASIC5.19□□□□□ -1.58
SHISA3A0PJX4 TOMM6-202ENST00000398884 637 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
SHISA3A0PJX4 MRPL35-203ENST00000409180 651 ntAPPRIS ALT1 TSL 3 BASIC5.19□□□□□ -1.58
SHISA3A0PJX4 RNU2-62P-201ENST00000410868 191 ntBASIC5.19□□□□□ -1.58
SHISA3A0PJX4 LINC00354-201ENST00000412119 347 ntTSL 5 BASIC5.19□□□□□ -1.58
SHISA3A0PJX4 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC5.19□□□□□ -1.58
SHISA3A0PJX4 AL391811.1-201ENST00000416908 423 ntTSL 3 BASIC5.19□□□□□ -1.58
SHISA3A0PJX4 CRIP1P1-201ENST00000427567 185 ntBASIC5.19□□□□□ -1.58
SHISA3A0PJX4 PRH1-201ENST00000428168 603 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
SHISA3A0PJX4 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC5.19□□□□□ -1.58
SHISA3A0PJX4 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC5.19□□□□□ -1.58
SHISA3A0PJX4 AL022324.2-201ENST00000434827 780 ntBASIC5.19□□□□□ -1.58
SHISA3A0PJX4 MTND3P2-201ENST00000438452 342 ntBASIC5.19□□□□□ -1.58
SHISA3A0PJX4 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC5.19□□□□□ -1.58
SHISA3A0PJX4 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC5.19□□□□□ -1.58
SHISA3A0PJX4 AL133319.1-201ENST00000447848 777 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
SHISA3A0PJX4 AC104073.1-201ENST00000451988 151 ntBASIC5.19□□□□□ -1.58
SHISA3A0PJX4 NANOGP10-201ENST00000453325 895 ntBASIC5.19□□□□□ -1.58
SHISA3A0PJX4 AL354710.1-201ENST00000453641 246 ntBASIC5.19□□□□□ -1.58
SHISA3A0PJX4 RPL31P11-202ENST00000454082 372 ntBASIC5.19□□□□□ -1.58
SHISA3A0PJX4 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC5.19□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 106.9 ms