Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
TCRBV7S3A2A0A539 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
TCRBV7S3A2A0A539 AC107982.1-201ENST00000507171 1300 ntBASIC4.47□□□□□ -1.69
TCRBV7S3A2A0A539 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC4.47□□□□□ -1.69
TCRBV7S3A2A0A539 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
TCRBV7S3A2A0A539 AC021755.1-201ENST00000559747 1447 ntBASIC4.47□□□□□ -1.69
TCRBV7S3A2A0A539 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
TCRBV7S3A2A0A539 MAPK10-286ENST00000641208 8747 ntBASIC4.47□□□□□ -1.69
TCRBV7S3A2A0A539 AC021242.1-201ENST00000507315 2035 ntBASIC4.47□□□□□ -1.69
TCRBV7S3A2A0A539 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
TCRBV7S3A2A0A539 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC4.47□□□□□ -1.69
TCRBV7S3A2A0A539 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
TCRBV7S3A2A0A539 RNA5SP52-201ENST00000362448 134 ntBASIC4.47□□□□□ -1.69
TCRBV7S3A2A0A539 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
TCRBV7S3A2A0A539 SNORA70F-201ENST00000384142 135 ntBASIC4.47□□□□□ -1.69
TCRBV7S3A2A0A539 SNORD66.1-201ENST00000391230 76 ntBASIC4.47□□□□□ -1.69
TCRBV7S3A2A0A539 GLULP6-201ENST00000399502 913 ntBASIC4.47□□□□□ -1.69
TCRBV7S3A2A0A539 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
TCRBV7S3A2A0A539 AC097374.1-203ENST00000400783 485 ntBASIC4.47□□□□□ -1.69
TCRBV7S3A2A0A539 AL121978.1-201ENST00000402778 359 ntBASIC4.47□□□□□ -1.69
TCRBV7S3A2A0A539 MTCO3P31-201ENST00000405526 789 ntBASIC4.47□□□□□ -1.69
TCRBV7S3A2A0A539 AC092634.6-201ENST00000418558 192 ntBASIC4.47□□□□□ -1.69
TCRBV7S3A2A0A539 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC4.47□□□□□ -1.69
TCRBV7S3A2A0A539 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC4.47□□□□□ -1.69
TCRBV7S3A2A0A539 RPL7AP25-201ENST00000423357 805 ntBASIC4.47□□□□□ -1.69
TCRBV7S3A2A0A539 BX119904.4-201ENST00000424402 301 ntBASIC4.47□□□□□ -1.69
TCRBV7S3A2A0A539 RPL31P54-201ENST00000429803 370 ntBASIC4.47□□□□□ -1.69
TCRBV7S3A2A0A539 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC4.47□□□□□ -1.69
TCRBV7S3A2A0A539 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC4.47□□□□□ -1.69
TCRBV7S3A2A0A539 ABCF2P2-201ENST00000450549 296 ntBASIC4.47□□□□□ -1.69
TCRBV7S3A2A0A539 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC4.47□□□□□ -1.69
TCRBV7S3A2A0A539 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC4.47□□□□□ -1.69
TCRBV7S3A2A0A539 MTND3P7-201ENST00000474435 343 ntBASIC4.47□□□□□ -1.69
TCRBV7S3A2A0A539 RPL30P6-201ENST00000475925 342 ntBASIC4.47□□□□□ -1.69
TCRBV7S3A2A0A539 RPL7P38-201ENST00000488396 739 ntBASIC4.47□□□□□ -1.69
TCRBV7S3A2A0A539 IGKV1OR2-1-201ENST00000514060 354 ntBASIC4.47□□□□□ -1.69
TCRBV7S3A2A0A539 MTCO1P30-201ENST00000515244 580 ntBASIC4.47□□□□□ -1.69
TCRBV7S3A2A0A539 RN7SKP96-201ENST00000516948 297 ntBASIC4.47□□□□□ -1.69
TCRBV7S3A2A0A539 SNORA48.10-201ENST00000516965 160 ntBASIC4.47□□□□□ -1.69
TCRBV7S3A2A0A539 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC4.47□□□□□ -1.69
TCRBV7S3A2A0A539 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC4.47□□□□□ -1.69
TCRBV7S3A2A0A539 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
TCRBV7S3A2A0A539 REXO2-218ENST00000544827 880 ntTSL 3 BASIC4.47□□□□□ -1.69
TCRBV7S3A2A0A539 PCNPP1-201ENST00000552501 511 ntBASIC4.47□□□□□ -1.69
TCRBV7S3A2A0A539 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC4.47□□□□□ -1.69
TCRBV7S3A2A0A539 AC138915.2-201ENST00000569776 97 ntBASIC4.47□□□□□ -1.69
TCRBV7S3A2A0A539 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC4.47□□□□□ -1.69
TCRBV7S3A2A0A539 DPRXP4-201ENST00000578053 568 ntBASIC4.47□□□□□ -1.69
TCRBV7S3A2A0A539 DUXAP11-201ENST00000603858 526 ntBASIC4.47□□□□□ -1.69
TCRBV7S3A2A0A539 AL022161.1-201ENST00000604390 213 ntBASIC4.47□□□□□ -1.69
TCRBV7S3A2A0A539 AC105129.3-201ENST00000605455 485 ntBASIC4.47□□□□□ -1.69
TCRBV7S3A2A0A539 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC4.47□□□□□ -1.69
TCRBV7S3A2A0A539 SNX18P1Y-201ENST00000616231 511 ntBASIC4.47□□□□□ -1.69
TCRBV7S3A2A0A539 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC4.47□□□□□ -1.69
TCRBV7S3A2A0A539 AC010608.2-201ENST00000624830 470 ntBASIC4.47□□□□□ -1.69
TCRBV7S3A2A0A539 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC4.47□□□□□ -1.69
TCRBV7S3A2A0A539 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
TCRBV7S3A2A0A539 CDR1-202ENST00000625883 1485 ntBASIC4.47□□□□□ -1.69
TCRBV7S3A2A0A539 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC4.47□□□□□ -1.69
TCRBV7S3A2A0A539 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC4.47□□□□□ -1.69
TCRBV7S3A2A0A539 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
TCRBV7S3A2A0A539 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
TCRBV7S3A2A0A539 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
TCRBV7S3A2A0A539 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC4.46□□□□□ -1.69
TCRBV7S3A2A0A539 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
TCRBV7S3A2A0A539 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.46□□□□□ -1.69
TCRBV7S3A2A0A539 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
TCRBV7S3A2A0A539 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
TCRBV7S3A2A0A539 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC4.46□□□□□ -1.7
TCRBV7S3A2A0A539 AC107027.3-201ENST00000565095 3473 ntBASIC4.46□□□□□ -1.7
TCRBV7S3A2A0A539 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
TCRBV7S3A2A0A539 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC4.46□□□□□ -1.7
TCRBV7S3A2A0A539 AC091046.3-201ENST00000631455 1574 ntBASIC4.46□□□□□ -1.7
TCRBV7S3A2A0A539 SNORD113.2-201ENST00000364166 89 ntBASIC4.46□□□□□ -1.7
TCRBV7S3A2A0A539 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
TCRBV7S3A2A0A539 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
TCRBV7S3A2A0A539 MIR298-201ENST00000401212 88 ntBASIC4.46□□□□□ -1.7
TCRBV7S3A2A0A539 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC4.46□□□□□ -1.7
TCRBV7S3A2A0A539 AL136133.1-201ENST00000413694 376 ntBASIC4.46□□□□□ -1.7
TCRBV7S3A2A0A539 AC008280.1-201ENST00000418851 412 ntBASIC4.46□□□□□ -1.7
TCRBV7S3A2A0A539 SEPT2P1-201ENST00000419651 180 ntBASIC4.46□□□□□ -1.7
TCRBV7S3A2A0A539 DNAJA1P2-201ENST00000421360 1197 ntBASIC4.46□□□□□ -1.7
TCRBV7S3A2A0A539 EIF4EP1-201ENST00000422311 642 ntBASIC4.46□□□□□ -1.7
TCRBV7S3A2A0A539 AL022400.1-201ENST00000423946 935 ntBASIC4.46□□□□□ -1.7
TCRBV7S3A2A0A539 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC4.46□□□□□ -1.7
TCRBV7S3A2A0A539 VN1R108P-201ENST00000431580 830 ntBASIC4.46□□□□□ -1.7
TCRBV7S3A2A0A539 B3GNT2P1-201ENST00000434960 952 ntBASIC4.46□□□□□ -1.7
TCRBV7S3A2A0A539 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC4.46□□□□□ -1.7
TCRBV7S3A2A0A539 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC4.46□□□□□ -1.7
TCRBV7S3A2A0A539 UBE2D3P4-201ENST00000441973 436 ntBASIC4.46□□□□□ -1.7
TCRBV7S3A2A0A539 AC099654.1-201ENST00000442649 407 ntTSL 3 BASIC4.46□□□□□ -1.7
TCRBV7S3A2A0A539 MTND2P4-201ENST00000445034 1004 ntBASIC4.46□□□□□ -1.7
TCRBV7S3A2A0A539 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
TCRBV7S3A2A0A539 RPL23AP15-201ENST00000450202 459 ntBASIC4.46□□□□□ -1.7
TCRBV7S3A2A0A539 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
TCRBV7S3A2A0A539 VN1R32P-201ENST00000452234 905 ntBASIC4.46□□□□□ -1.7
TCRBV7S3A2A0A539 AC073387.1-201ENST00000453261 709 ntBASIC4.46□□□□□ -1.7
TCRBV7S3A2A0A539 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC4.46□□□□□ -1.7
TCRBV7S3A2A0A539 SYPL1P1-201ENST00000473622 768 ntBASIC4.46□□□□□ -1.7
TCRBV7S3A2A0A539 RAD51AP1P1-201ENST00000484195 1001 ntBASIC4.46□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 116.4 ms