Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 AC091152.2-201ENST00000591628 2569 ntBASIC2.73□□□□□ -1.97
HLA-DRB4X5D2U9 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC2.73□□□□□ -1.97
HLA-DRB4X5D2U9 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC2.72□□□□□ -1.97
HLA-DRB4X5D2U9 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
HLA-DRB4X5D2U9 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
HLA-DRB4X5D2U9 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC2.72□□□□□ -1.97
HLA-DRB4X5D2U9 RN7SKP280-201ENST00000364196 304 ntBASIC2.72□□□□□ -1.97
HLA-DRB4X5D2U9 AP002088.1-201ENST00000382740 395 ntBASIC2.72□□□□□ -1.97
HLA-DRB4X5D2U9 SOD2P1-201ENST00000396543 562 ntBASIC2.72□□□□□ -1.97
HLA-DRB4X5D2U9 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
HLA-DRB4X5D2U9 AL136116.1-201ENST00000403591 381 ntBASIC2.72□□□□□ -1.97
HLA-DRB4X5D2U9 TEX41-203ENST00000420472 765 ntTSL 3 BASIC2.72□□□□□ -1.97
HLA-DRB4X5D2U9 OR4F13P-201ENST00000428478 931 ntBASIC2.72□□□□□ -1.97
HLA-DRB4X5D2U9 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC2.72□□□□□ -1.97
HLA-DRB4X5D2U9 MRPS18BP2-201ENST00000434310 759 ntBASIC2.72□□□□□ -1.97
HLA-DRB4X5D2U9 B3GNT2P1-201ENST00000434960 952 ntBASIC2.72□□□□□ -1.97
HLA-DRB4X5D2U9 AC125238.1-201ENST00000448842 249 ntBASIC2.72□□□□□ -1.97
HLA-DRB4X5D2U9 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC2.72□□□□□ -1.97
HLA-DRB4X5D2U9 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC2.72□□□□□ -1.97
HLA-DRB4X5D2U9 RPS20P32-201ENST00000456044 356 ntBASIC2.72□□□□□ -1.97
HLA-DRB4X5D2U9 UBDP1-202ENST00000457888 382 ntBASIC2.72□□□□□ -1.97
HLA-DRB4X5D2U9 AC007688.1-201ENST00000475592 759 ntBASIC2.72□□□□□ -1.97
HLA-DRB4X5D2U9 TAF8-207ENST00000482432 556 ntTSL 2 BASIC2.72□□□□□ -1.97
HLA-DRB4X5D2U9 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC2.72□□□□□ -1.97
HLA-DRB4X5D2U9 RPL5P23-201ENST00000496040 868 ntBASIC2.72□□□□□ -1.97
HLA-DRB4X5D2U9 LINC02278-201ENST00000512170 500 ntTSL 5 BASIC2.72□□□□□ -1.97
HLA-DRB4X5D2U9 AC026402.1-201ENST00000513642 170 ntBASIC2.72□□□□□ -1.97
HLA-DRB4X5D2U9 RFESD-208ENST00000513950 464 ntTSL 5 BASIC2.72□□□□□ -1.97
HLA-DRB4X5D2U9 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC2.72□□□□□ -1.97
HLA-DRB4X5D2U9 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC2.72□□□□□ -1.97
HLA-DRB4X5D2U9 AP004242.1-201ENST00000533701 349 ntBASIC2.72□□□□□ -1.97
HLA-DRB4X5D2U9 CD36-221ENST00000534394 1741 ntTSL 2 BASIC2.72□□□□□ -1.97
HLA-DRB4X5D2U9 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC2.72□□□□□ -1.97
HLA-DRB4X5D2U9 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC2.72□□□□□ -1.97
HLA-DRB4X5D2U9 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC2.72□□□□□ -1.97
HLA-DRB4X5D2U9 AC037471.2-201ENST00000564941 598 ntBASIC2.72□□□□□ -1.97
HLA-DRB4X5D2U9 AC010511.1-202ENST00000590229 573 ntTSL 4 BASIC2.72□□□□□ -1.97
HLA-DRB4X5D2U9 IGKV1OR2-6-201ENST00000603485 277 ntBASIC2.72□□□□□ -1.97
HLA-DRB4X5D2U9 RNU1-30P-201ENST00000606575 163 ntBASIC2.72□□□□□ -1.97
HLA-DRB4X5D2U9 AC019131.2-201ENST00000609071 870 ntBASIC2.72□□□□□ -1.97
HLA-DRB4X5D2U9 AL732618.1-201ENST00000623251 301 ntBASIC2.72□□□□□ -1.97
HLA-DRB4X5D2U9 AL732372.2-225ENST00000642124 456 ntBASIC2.72□□□□□ -1.97
HLA-DRB4X5D2U9 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC2.72□□□□□ -1.97
HLA-DRB4X5D2U9 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
HLA-DRB4X5D2U9 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC2.71□□□□□ -1.97
HLA-DRB4X5D2U9 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.97
HLA-DRB4X5D2U9 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC2.71□□□□□ -1.98
HLA-DRB4X5D2U9 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC2.71□□□□□ -1.98
HLA-DRB4X5D2U9 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
HLA-DRB4X5D2U9 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC2.71□□□□□ -1.98
HLA-DRB4X5D2U9 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
HLA-DRB4X5D2U9 AL513302.2-201ENST00000562313 1842 ntBASIC2.71□□□□□ -1.98
HLA-DRB4X5D2U9 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
HLA-DRB4X5D2U9 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC2.71□□□□□ -1.98
HLA-DRB4X5D2U9 HSPE1P26-201ENST00000405341 275 ntBASIC2.71□□□□□ -1.98
HLA-DRB4X5D2U9 AL583834.1-201ENST00000406943 343 ntBASIC2.71□□□□□ -1.98
HLA-DRB4X5D2U9 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC2.71□□□□□ -1.98
HLA-DRB4X5D2U9 RN7SKP222-201ENST00000410651 315 ntBASIC2.71□□□□□ -1.98
HLA-DRB4X5D2U9 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC2.71□□□□□ -1.98
HLA-DRB4X5D2U9 RPL31P45-201ENST00000419532 356 ntBASIC2.71□□□□□ -1.98
HLA-DRB4X5D2U9 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC2.71□□□□□ -1.98
HLA-DRB4X5D2U9 AL158071.1-201ENST00000430315 461 ntBASIC2.71□□□□□ -1.98
HLA-DRB4X5D2U9 BX679664.1-201ENST00000434429 253 ntBASIC2.71□□□□□ -1.98
HLA-DRB4X5D2U9 NDUFB1P1-201ENST00000435191 180 ntBASIC2.71□□□□□ -1.98
HLA-DRB4X5D2U9 LMO7DN-IT1-201ENST00000436872 321 ntTSL 3 BASIC2.71□□□□□ -1.98
HLA-DRB4X5D2U9 CYCSP43-201ENST00000438233 310 ntBASIC2.71□□□□□ -1.98
HLA-DRB4X5D2U9 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC2.71□□□□□ -1.98
HLA-DRB4X5D2U9 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC2.71□□□□□ -1.98
HLA-DRB4X5D2U9 RN7SL442P-201ENST00000473804 320 ntBASIC2.71□□□□□ -1.98
HLA-DRB4X5D2U9 AL161747.1-201ENST00000480068 358 ntBASIC2.71□□□□□ -1.98
HLA-DRB4X5D2U9 RPS3AP50-201ENST00000487064 803 ntBASIC2.71□□□□□ -1.98
HLA-DRB4X5D2U9 HMGN1P11-201ENST00000508668 303 ntBASIC2.71□□□□□ -1.98
HLA-DRB4X5D2U9 RNU4ATAC3P-201ENST00000516699 126 ntBASIC2.71□□□□□ -1.98
HLA-DRB4X5D2U9 NDUFB9P3-201ENST00000521269 501 ntBASIC2.71□□□□□ -1.98
HLA-DRB4X5D2U9 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC2.71□□□□□ -1.98
HLA-DRB4X5D2U9 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC2.71□□□□□ -1.98
HLA-DRB4X5D2U9 AP000926.4-201ENST00000527351 454 ntBASIC2.71□□□□□ -1.98
HLA-DRB4X5D2U9 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
HLA-DRB4X5D2U9 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC2.71□□□□□ -1.98
HLA-DRB4X5D2U9 OR5AP1P-201ENST00000529730 940 ntBASIC2.71□□□□□ -1.98
HLA-DRB4X5D2U9 OR5D17P-201ENST00000531492 978 ntBASIC2.71□□□□□ -1.98
HLA-DRB4X5D2U9 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC2.71□□□□□ -1.98
HLA-DRB4X5D2U9 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC2.71□□□□□ -1.98
HLA-DRB4X5D2U9 AC004024.1-201ENST00000549244 247 ntBASIC2.71□□□□□ -1.98
HLA-DRB4X5D2U9 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC2.71□□□□□ -1.98
HLA-DRB4X5D2U9 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC2.71□□□□□ -1.98
HLA-DRB4X5D2U9 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC2.71□□□□□ -1.98
HLA-DRB4X5D2U9 AL845331.3-202ENST00000562856 261 ntBASIC2.71□□□□□ -1.98
HLA-DRB4X5D2U9 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
HLA-DRB4X5D2U9 SS18L2P2-201ENST00000583960 235 ntBASIC2.71□□□□□ -1.98
HLA-DRB4X5D2U9 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC2.71□□□□□ -1.98
HLA-DRB4X5D2U9 AL391497.1-201ENST00000608671 547 ntBASIC2.71□□□□□ -1.98
HLA-DRB4X5D2U9 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
HLA-DRB4X5D2U9 5S_rRNA.12-201ENST00000617631 107 ntBASIC2.71□□□□□ -1.98
HLA-DRB4X5D2U9 AL731566.2-201ENST00000618971 317 ntBASIC2.71□□□□□ -1.98
HLA-DRB4X5D2U9 AP003072.4-201ENST00000624580 310 ntBASIC2.71□□□□□ -1.98
HLA-DRB4X5D2U9 FTO-223ENST00000640179 210 ntTSL 5 BASIC2.71□□□□□ -1.98
HLA-DRB4X5D2U9 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
HLA-DRB4X5D2U9 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC2.71□□□□□ -1.98
HLA-DRB4X5D2U9 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 97.3 ms