Protein–RNA interactions for Protein: Q9UPP1

PHF8, Histone lysine demethylase PHF8, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF8Q9UPP1 AC108727.2-201ENST00000512277 392 ntTSL 3 BASIC8.41□□□□□ -1.06
PHF8Q9UPP1 HMGN1P9-201ENST00000515212 298 ntBASIC8.41□□□□□ -1.06
PHF8Q9UPP1 SNORA70.20-201ENST00000516848 126 ntBASIC8.41□□□□□ -1.06
PHF8Q9UPP1 SNORD116.3-201ENST00000517176 78 ntBASIC8.41□□□□□ -1.06
PHF8Q9UPP1 IGKV2-18-201ENST00000522607 343 ntBASIC8.41□□□□□ -1.06
PHF8Q9UPP1 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC8.41□□□□□ -1.06
PHF8Q9UPP1 MIR3910-1-201ENST00000580936 111 ntBASIC8.41□□□□□ -1.06
PHF8Q9UPP1 AL354984.3-201ENST00000604803 325 ntBASIC8.41□□□□□ -1.06
PHF8Q9UPP1 AL021879.1-201ENST00000611756 288 ntBASIC8.41□□□□□ -1.06
PHF8Q9UPP1 SRGAP1-206ENST00000543397 5652 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
PHF8Q9UPP1 ESRRG-203ENST00000361395 5216 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
PHF8Q9UPP1 ESRRG-209ENST00000408911 5216 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
PHF8Q9UPP1 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
PHF8Q9UPP1 C9-201ENST00000263408 2713 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
PHF8Q9UPP1 SLC16A4-210ENST00000541986 2496 ntTSL 2 BASIC8.41□□□□□ -1.06
PHF8Q9UPP1 TRIM6-TRIM34-201ENST00000354852 3391 ntAPPRIS P1 TSL 2 BASIC8.41□□□□□ -1.06
PHF8Q9UPP1 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC8.41□□□□□ -1.06
PHF8Q9UPP1 HSPA8P18-201ENST00000439846 1928 ntBASIC8.41□□□□□ -1.06
PHF8Q9UPP1 TPMT-201ENST00000309983 3181 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
PHF8Q9UPP1 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
PHF8Q9UPP1 FMN1-211ENST00000561249 4251 ntAPPRIS ALT2 TSL 5 BASIC8.4□□□□□ -1.06
PHF8Q9UPP1 PUS3-203ENST00000530811 1792 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
PHF8Q9UPP1 LINC-ROR-201ENST00000553704 2603 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
PHF8Q9UPP1 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC8.4□□□□□ -1.06
PHF8Q9UPP1 ORC3-206ENST00000546266 2470 ntTSL 2 BASIC8.4□□□□□ -1.06
PHF8Q9UPP1 RXFP2-201ENST00000298386 3319 ntAPPRIS P3 TSL 1 (best) BASIC8.4□□□□□ -1.06
PHF8Q9UPP1 MEF2C-AS1-214ENST00000514794 2350 ntTSL 4 BASIC8.4□□□□□ -1.06
PHF8Q9UPP1 GATAD2B-204ENST00000634544 2342 ntAPPRIS P1 TSL 5 BASIC8.4□□□□□ -1.06
PHF8Q9UPP1 ZSCAN12-202ENST00000396827 3909 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
PHF8Q9UPP1 SNORA62.1-201ENST00000364287 154 ntBASIC8.4□□□□□ -1.06
PHF8Q9UPP1 RNA5SP500-201ENST00000364486 119 ntBASIC8.4□□□□□ -1.06
PHF8Q9UPP1 RNU6-472P-201ENST00000384299 107 ntBASIC8.4□□□□□ -1.06
PHF8Q9UPP1 MIR558-201ENST00000384920 94 ntBASIC8.4□□□□□ -1.06
PHF8Q9UPP1 RNU6-823P-201ENST00000391042 103 ntBASIC8.4□□□□□ -1.06
PHF8Q9UPP1 AC139712.2-201ENST00000424302 339 ntBASIC8.4□□□□□ -1.06
PHF8Q9UPP1 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC8.4□□□□□ -1.06
PHF8Q9UPP1 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC8.4□□□□□ -1.06
PHF8Q9UPP1 SNAP23P1-201ENST00000433229 246 ntBASIC8.4□□□□□ -1.06
PHF8Q9UPP1 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC8.4□□□□□ -1.06
PHF8Q9UPP1 NANOGP10-201ENST00000453325 895 ntBASIC8.4□□□□□ -1.06
PHF8Q9UPP1 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC8.4□□□□□ -1.06
PHF8Q9UPP1 MRE11P1-201ENST00000464884 2127 ntBASIC8.4□□□□□ -1.06
PHF8Q9UPP1 RN7SL799P-201ENST00000475891 298 ntBASIC8.4□□□□□ -1.06
PHF8Q9UPP1 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC8.4□□□□□ -1.06
PHF8Q9UPP1 COX6B1P2-201ENST00000489624 230 ntBASIC8.4□□□□□ -1.06
PHF8Q9UPP1 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC8.4□□□□□ -1.06
PHF8Q9UPP1 RNA5SP503-201ENST00000517047 117 ntBASIC8.4□□□□□ -1.06
PHF8Q9UPP1 RNU6-699P-201ENST00000517081 110 ntBASIC8.4□□□□□ -1.06
PHF8Q9UPP1 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC8.4□□□□□ -1.06
PHF8Q9UPP1 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC8.4□□□□□ -1.06
PHF8Q9UPP1 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC8.4□□□□□ -1.06
PHF8Q9UPP1 AC027229.1-201ENST00000583887 253 ntBASIC8.4□□□□□ -1.06
PHF8Q9UPP1 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC8.4□□□□□ -1.06
PHF8Q9UPP1 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC8.4□□□□□ -1.06
PHF8Q9UPP1 CDRT1-208ENST00000630868 794 ntBASIC8.4□□□□□ -1.06
PHF8Q9UPP1 WDR75-207ENST00000631047 270 ntTSL 5 BASIC8.4□□□□□ -1.06
PHF8Q9UPP1 CEP120-202ENST00000306481 4629 ntTSL 5 BASIC8.4□□□□□ -1.06
PHF8Q9UPP1 AL121950.1-201ENST00000624993 2077 ntBASIC8.4□□□□□ -1.06
PHF8Q9UPP1 GAGE1-204ENST00000619375 2873 ntAPPRIS P1 TSL 5 BASIC8.4□□□□□ -1.06
PHF8Q9UPP1 CC2D2B-202ENST00000410012 1792 ntAPPRIS ALT2 TSL 2 BASIC8.4□□□□□ -1.07
PHF8Q9UPP1 IL2RA-203ENST00000379959 3176 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.07
PHF8Q9UPP1 CAMSAP2-201ENST00000236925 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC8.4□□□□□ -1.07
PHF8Q9UPP1 PTK2-201ENST00000340930 4414 ntTSL 2 BASIC8.4□□□□□ -1.07
PHF8Q9UPP1 KAT6B-204ENST00000372724 7106 ntAPPRIS ALT2 TSL 5 BASIC8.4□□□□□ -1.07
PHF8Q9UPP1 DAZ1-201ENST00000382510 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC8.4□□□□□ -1.07
PHF8Q9UPP1 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC8.4□□□□□ -1.07
PHF8Q9UPP1 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.07
PHF8Q9UPP1 AC012254.3-201ENST00000591183 2117 ntBASIC8.39□□□□□ -1.07
PHF8Q9UPP1 POLA1-202ENST00000379068 5486 ntAPPRIS ALT2 TSL 5 BASIC8.39□□□□□ -1.07
PHF8Q9UPP1 BDNF-212ENST00000525528 4766 ntAPPRIS P1 BASIC8.39□□□□□ -1.07
PHF8Q9UPP1 MAPK10-251ENST00000640858 3052 ntTSL 5 BASIC8.39□□□□□ -1.07
PHF8Q9UPP1 KCNN3-205ENST00000618040 13057 ntTSL 5 BASIC8.39□□□□□ -1.07
PHF8Q9UPP1 SREK1-203ENST00000380918 2433 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
PHF8Q9UPP1 DMTF1-213ENST00000432937 2411 ntTSL 2 BASIC8.39□□□□□ -1.07
PHF8Q9UPP1 AC105114.1-201ENST00000624795 1862 ntBASIC8.39□□□□□ -1.07
PHF8Q9UPP1 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
PHF8Q9UPP1 RABGEF1-202ENST00000380828 3864 ntTSL 2 BASIC8.39□□□□□ -1.07
PHF8Q9UPP1 NSUN4-208ENST00000498008 3867 ntTSL 2 BASIC8.39□□□□□ -1.07
PHF8Q9UPP1 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
PHF8Q9UPP1 SNORA20.1-201ENST00000364790 130 ntBASIC8.39□□□□□ -1.07
PHF8Q9UPP1 MIR105-2-201ENST00000385083 81 ntBASIC8.39□□□□□ -1.07
PHF8Q9UPP1 EIF4E2P1-201ENST00000393781 255 ntBASIC8.39□□□□□ -1.07
PHF8Q9UPP1 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC8.39□□□□□ -1.07
PHF8Q9UPP1 AL137014.1-201ENST00000420490 1226 ntBASIC8.39□□□□□ -1.07
PHF8Q9UPP1 AL355433.1-201ENST00000422804 300 ntBASIC8.39□□□□□ -1.07
PHF8Q9UPP1 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC8.39□□□□□ -1.07
PHF8Q9UPP1 RPL23AP74-201ENST00000437246 471 ntBASIC8.39□□□□□ -1.07
PHF8Q9UPP1 AC104332.1-201ENST00000440471 797 ntBASIC8.39□□□□□ -1.07
PHF8Q9UPP1 AL035551.1-201ENST00000446931 348 ntBASIC8.39□□□□□ -1.07
PHF8Q9UPP1 RN7SL466P-201ENST00000497546 295 ntBASIC8.39□□□□□ -1.07
PHF8Q9UPP1 SLC25A15P5-201ENST00000508033 253 ntBASIC8.39□□□□□ -1.07
PHF8Q9UPP1 RNU6-488P-201ENST00000515918 99 ntBASIC8.39□□□□□ -1.07
PHF8Q9UPP1 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC8.39□□□□□ -1.07
PHF8Q9UPP1 AC128657.1-201ENST00000549459 145 ntBASIC8.39□□□□□ -1.07
PHF8Q9UPP1 MIR4703-201ENST00000577728 79 ntBASIC8.39□□□□□ -1.07
PHF8Q9UPP1 MIR3128-201ENST00000581957 66 ntBASIC8.39□□□□□ -1.07
PHF8Q9UPP1 AC017100.2-201ENST00000584628 355 ntBASIC8.39□□□□□ -1.07
PHF8Q9UPP1 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC8.39□□□□□ -1.07
PHF8Q9UPP1 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC8.39□□□□□ -1.07
PHF8Q9UPP1 MPP6-209ENST00000625307 126 ntTSL 5 BASIC8.39□□□□□ -1.07
Retrieved 100 of 98,524 protein–RNA pairs in 111 ms