Protein–RNA interactions for Protein: Q9ULT6

ZNRF3, E3 ubiquitin-protein ligase ZNRF3, humanhuman

Predictions only

Length 936 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNRF3Q9ULT6 AC016745.2-201ENST00000608834 3443 ntBASIC6.07□□□□□ -1.44
ZNRF3Q9ULT6 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
ZNRF3Q9ULT6 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC6.07□□□□□ -1.44
ZNRF3Q9ULT6 OR4K15-201ENST00000305051 1216 ntBASIC6.07□□□□□ -1.44
ZNRF3Q9ULT6 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC6.07□□□□□ -1.44
ZNRF3Q9ULT6 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC6.07□□□□□ -1.44
ZNRF3Q9ULT6 RN7SKP226-201ENST00000364912 300 ntBASIC6.07□□□□□ -1.44
ZNRF3Q9ULT6 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC6.07□□□□□ -1.44
ZNRF3Q9ULT6 MIR181A1-201ENST00000385026 110 ntBASIC6.07□□□□□ -1.44
ZNRF3Q9ULT6 U8.14-201ENST00000390843 143 ntBASIC6.07□□□□□ -1.44
ZNRF3Q9ULT6 AL049693.1-201ENST00000402760 611 ntBASIC6.07□□□□□ -1.44
ZNRF3Q9ULT6 SNORA77-201ENST00000408716 125 ntBASIC6.07□□□□□ -1.44
ZNRF3Q9ULT6 Y_RNA.598-201ENST00000410480 95 ntBASIC6.07□□□□□ -1.44
ZNRF3Q9ULT6 RN7SKP17-201ENST00000411242 351 ntBASIC6.07□□□□□ -1.44
ZNRF3Q9ULT6 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC6.07□□□□□ -1.44
ZNRF3Q9ULT6 B3GALNT1P1-201ENST00000420569 975 ntBASIC6.07□□□□□ -1.44
ZNRF3Q9ULT6 GLRXP1-201ENST00000423261 334 ntBASIC6.07□□□□□ -1.44
ZNRF3Q9ULT6 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC6.07□□□□□ -1.44
ZNRF3Q9ULT6 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC6.07□□□□□ -1.44
ZNRF3Q9ULT6 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC6.07□□□□□ -1.44
ZNRF3Q9ULT6 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC6.07□□□□□ -1.44
ZNRF3Q9ULT6 USP9YP12-201ENST00000450481 570 ntBASIC6.07□□□□□ -1.44
ZNRF3Q9ULT6 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC6.07□□□□□ -1.44
ZNRF3Q9ULT6 AC098824.1-201ENST00000453565 980 ntBASIC6.07□□□□□ -1.44
ZNRF3Q9ULT6 LARP1BP2-201ENST00000486594 519 ntBASIC6.07□□□□□ -1.44
ZNRF3Q9ULT6 RPL9P6-201ENST00000492764 598 ntBASIC6.07□□□□□ -1.44
ZNRF3Q9ULT6 AC105252.1-201ENST00000503089 286 ntBASIC6.07□□□□□ -1.44
ZNRF3Q9ULT6 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC6.07□□□□□ -1.44
ZNRF3Q9ULT6 ENPP7P9-201ENST00000514456 627 ntBASIC6.07□□□□□ -1.44
ZNRF3Q9ULT6 AC090502.2-201ENST00000549267 280 ntBASIC6.07□□□□□ -1.44
ZNRF3Q9ULT6 SERPINE4P-201ENST00000554978 281 ntBASIC6.07□□□□□ -1.44
ZNRF3Q9ULT6 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC6.07□□□□□ -1.44
ZNRF3Q9ULT6 AC006960.3-201ENST00000561845 705 ntBASIC6.07□□□□□ -1.44
ZNRF3Q9ULT6 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
ZNRF3Q9ULT6 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC6.07□□□□□ -1.44
ZNRF3Q9ULT6 SNORA59B-202ENST00000578183 701 ntBASIC6.07□□□□□ -1.44
ZNRF3Q9ULT6 MIR4277-201ENST00000578298 84 ntBASIC6.07□□□□□ -1.44
ZNRF3Q9ULT6 AP000403.1-201ENST00000603349 851 ntBASIC6.07□□□□□ -1.44
ZNRF3Q9ULT6 AC020910.2-201ENST00000603635 610 ntBASIC6.07□□□□□ -1.44
ZNRF3Q9ULT6 AP000860.1-201ENST00000605250 559 ntBASIC6.07□□□□□ -1.44
ZNRF3Q9ULT6 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC6.07□□□□□ -1.44
ZNRF3Q9ULT6 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC6.07□□□□□ -1.44
ZNRF3Q9ULT6 AC098614.4-201ENST00000607601 462 ntBASIC6.07□□□□□ -1.44
ZNRF3Q9ULT6 AL159169.3-201ENST00000608871 561 ntBASIC6.07□□□□□ -1.44
ZNRF3Q9ULT6 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC6.07□□□□□ -1.44
ZNRF3Q9ULT6 DLEU1_2.1-201ENST00000617920 342 ntBASIC6.07□□□□□ -1.44
ZNRF3Q9ULT6 CR381653.2-201ENST00000624041 768 ntBASIC6.07□□□□□ -1.44
ZNRF3Q9ULT6 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC6.07□□□□□ -1.44
ZNRF3Q9ULT6 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
ZNRF3Q9ULT6 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
ZNRF3Q9ULT6 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
ZNRF3Q9ULT6 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC6.07□□□□□ -1.44
ZNRF3Q9ULT6 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC6.07□□□□□ -1.44
ZNRF3Q9ULT6 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC6.07□□□□□ -1.44
ZNRF3Q9ULT6 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC6.07□□□□□ -1.44
ZNRF3Q9ULT6 AC140479.2-201ENST00000421567 3130 ntBASIC6.07□□□□□ -1.44
ZNRF3Q9ULT6 AC010928.1-201ENST00000592477 1447 ntBASIC6.07□□□□□ -1.44
ZNRF3Q9ULT6 OR4G11P-202ENST00000642116 1414 ntBASIC6.07□□□□□ -1.44
ZNRF3Q9ULT6 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC6.07□□□□□ -1.44
ZNRF3Q9ULT6 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC6.07□□□□□ -1.44
ZNRF3Q9ULT6 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
ZNRF3Q9ULT6 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
ZNRF3Q9ULT6 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
ZNRF3Q9ULT6 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
ZNRF3Q9ULT6 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC6.06□□□□□ -1.44
ZNRF3Q9ULT6 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC6.06□□□□□ -1.44
ZNRF3Q9ULT6 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
ZNRF3Q9ULT6 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
ZNRF3Q9ULT6 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
ZNRF3Q9ULT6 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC6.06□□□□□ -1.44
ZNRF3Q9ULT6 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC6.06□□□□□ -1.44
ZNRF3Q9ULT6 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
ZNRF3Q9ULT6 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
ZNRF3Q9ULT6 SNORA2.3-201ENST00000383920 135 ntBASIC6.06□□□□□ -1.44
ZNRF3Q9ULT6 RNU6-444P-201ENST00000383988 108 ntBASIC6.06□□□□□ -1.44
ZNRF3Q9ULT6 RNY3P14-201ENST00000384309 102 ntBASIC6.06□□□□□ -1.44
ZNRF3Q9ULT6 RPL17P50-201ENST00000396131 546 ntBASIC6.06□□□□□ -1.44
ZNRF3Q9ULT6 SNRPEP2-201ENST00000397592 279 ntBASIC6.06□□□□□ -1.44
ZNRF3Q9ULT6 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC6.06□□□□□ -1.44
ZNRF3Q9ULT6 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC6.06□□□□□ -1.44
ZNRF3Q9ULT6 USP9YP18-201ENST00000425912 695 ntBASIC6.06□□□□□ -1.44
ZNRF3Q9ULT6 AL158073.1-201ENST00000426848 1104 ntBASIC6.06□□□□□ -1.44
ZNRF3Q9ULT6 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC6.06□□□□□ -1.44
ZNRF3Q9ULT6 AC010881.1-201ENST00000433830 235 ntBASIC6.06□□□□□ -1.44
ZNRF3Q9ULT6 MTCO1P48-201ENST00000448024 1096 ntBASIC6.06□□□□□ -1.44
ZNRF3Q9ULT6 HMGN3P1-201ENST00000453847 193 ntBASIC6.06□□□□□ -1.44
ZNRF3Q9ULT6 RPL23AP56-201ENST00000460778 453 ntBASIC6.06□□□□□ -1.44
ZNRF3Q9ULT6 RPS3AP17-201ENST00000472594 777 ntBASIC6.06□□□□□ -1.44
ZNRF3Q9ULT6 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC6.06□□□□□ -1.44
ZNRF3Q9ULT6 RN7SL814P-201ENST00000487715 300 ntBASIC6.06□□□□□ -1.44
ZNRF3Q9ULT6 AC005912.1-201ENST00000495392 255 ntBASIC6.06□□□□□ -1.44
ZNRF3Q9ULT6 PRDX4P1-201ENST00000507189 574 ntBASIC6.06□□□□□ -1.44
ZNRF3Q9ULT6 AC022483.1-201ENST00000514020 567 ntBASIC6.06□□□□□ -1.44
ZNRF3Q9ULT6 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC6.06□□□□□ -1.44
ZNRF3Q9ULT6 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC6.06□□□□□ -1.44
ZNRF3Q9ULT6 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC6.06□□□□□ -1.44
ZNRF3Q9ULT6 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC6.06□□□□□ -1.44
ZNRF3Q9ULT6 TVP23CP2-201ENST00000571473 623 ntBASIC6.06□□□□□ -1.44
ZNRF3Q9ULT6 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC6.06□□□□□ -1.44
ZNRF3Q9ULT6 MIR4433B-201ENST00000581329 102 ntBASIC6.06□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 106.5 ms