Protein–RNA interactions for Protein: Q9UIU6

SIX4, Homeobox protein SIX4, humanhuman

Predictions only

Length 781 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4Q9UIU6 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
SIX4Q9UIU6 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
SIX4Q9UIU6 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC4.42□□□□□ -1.7
SIX4Q9UIU6 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC4.42□□□□□ -1.7
SIX4Q9UIU6 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC4.42□□□□□ -1.7
SIX4Q9UIU6 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
SIX4Q9UIU6 LINC01355-201ENST00000566551 5444 ntBASIC4.42□□□□□ -1.7
SIX4Q9UIU6 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
SIX4Q9UIU6 PHKBP1-201ENST00000450951 1951 ntBASIC4.42□□□□□ -1.7
SIX4Q9UIU6 MIR372-201ENST00000362225 67 ntBASIC4.42□□□□□ -1.7
SIX4Q9UIU6 RNU6-549P-201ENST00000384433 107 ntBASIC4.42□□□□□ -1.7
SIX4Q9UIU6 SNORA37-201ENST00000384504 129 ntBASIC4.42□□□□□ -1.7
SIX4Q9UIU6 ENSAP1-201ENST00000392855 326 ntBASIC4.42□□□□□ -1.7
SIX4Q9UIU6 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
SIX4Q9UIU6 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC4.42□□□□□ -1.7
SIX4Q9UIU6 AL008987.1-201ENST00000415528 237 ntBASIC4.42□□□□□ -1.7
SIX4Q9UIU6 ELOCP9-201ENST00000418624 239 ntBASIC4.42□□□□□ -1.7
SIX4Q9UIU6 AL358176.3-201ENST00000420757 454 ntBASIC4.42□□□□□ -1.7
SIX4Q9UIU6 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC4.42□□□□□ -1.7
SIX4Q9UIU6 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC4.42□□□□□ -1.7
SIX4Q9UIU6 AL358472.1-201ENST00000431295 329 ntBASIC4.42□□□□□ -1.7
SIX4Q9UIU6 RPS6P15-201ENST00000431996 751 ntBASIC4.42□□□□□ -1.7
SIX4Q9UIU6 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
SIX4Q9UIU6 HMGB1P45-201ENST00000435986 653 ntBASIC4.42□□□□□ -1.7
SIX4Q9UIU6 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC4.42□□□□□ -1.7
SIX4Q9UIU6 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC4.42□□□□□ -1.7
SIX4Q9UIU6 AC069528.1-202ENST00000482888 637 ntBASIC4.42□□□□□ -1.7
SIX4Q9UIU6 AC104687.1-201ENST00000485829 412 ntBASIC4.42□□□□□ -1.7
SIX4Q9UIU6 ARL4AP1-201ENST00000503220 705 ntBASIC4.42□□□□□ -1.7
SIX4Q9UIU6 AC093311.1-201ENST00000506586 2021 ntBASIC4.42□□□□□ -1.7
SIX4Q9UIU6 AC008565.1-201ENST00000509046 885 ntBASIC4.42□□□□□ -1.7
SIX4Q9UIU6 snoZ278.1-201ENST00000517059 112 ntBASIC4.42□□□□□ -1.7
SIX4Q9UIU6 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC4.42□□□□□ -1.7
SIX4Q9UIU6 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC4.42□□□□□ -1.7
SIX4Q9UIU6 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
SIX4Q9UIU6 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC4.42□□□□□ -1.7
SIX4Q9UIU6 AC091515.1-201ENST00000548110 679 ntBASIC4.42□□□□□ -1.7
SIX4Q9UIU6 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC4.42□□□□□ -1.7
SIX4Q9UIU6 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC4.42□□□□□ -1.7
SIX4Q9UIU6 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC4.42□□□□□ -1.7
SIX4Q9UIU6 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC4.42□□□□□ -1.7
SIX4Q9UIU6 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC4.42□□□□□ -1.7
SIX4Q9UIU6 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC4.42□□□□□ -1.7
SIX4Q9UIU6 AC007224.1-201ENST00000564410 144 ntBASIC4.42□□□□□ -1.7
SIX4Q9UIU6 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC4.42□□□□□ -1.7
SIX4Q9UIU6 AC007599.1-201ENST00000568688 1174 ntBASIC4.42□□□□□ -1.7
SIX4Q9UIU6 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC4.42□□□□□ -1.7
SIX4Q9UIU6 MTND6P33-201ENST00000571794 183 ntBASIC4.42□□□□□ -1.7
SIX4Q9UIU6 AL121834.1-201ENST00000572284 509 ntBASIC4.42□□□□□ -1.7
SIX4Q9UIU6 MIR5684-201ENST00000585074 65 ntBASIC4.42□□□□□ -1.7
SIX4Q9UIU6 AC013444.2-201ENST00000603317 787 ntBASIC4.42□□□□□ -1.7
SIX4Q9UIU6 AC009948.4-201ENST00000604692 675 ntBASIC4.42□□□□□ -1.7
SIX4Q9UIU6 AC016877.3-201ENST00000606778 504 ntBASIC4.42□□□□□ -1.7
SIX4Q9UIU6 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC4.42□□□□□ -1.7
SIX4Q9UIU6 ZYXP1-201ENST00000617638 118 ntBASIC4.42□□□□□ -1.7
SIX4Q9UIU6 U6.48-201ENST00000618523 106 ntBASIC4.42□□□□□ -1.7
SIX4Q9UIU6 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC4.42□□□□□ -1.7
SIX4Q9UIU6 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC4.42□□□□□ -1.7
SIX4Q9UIU6 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.42□□□□□ -1.7
SIX4Q9UIU6 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
SIX4Q9UIU6 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC4.42□□□□□ -1.7
SIX4Q9UIU6 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
SIX4Q9UIU6 BX005019.1-201ENST00000561881 1810 ntBASIC4.42□□□□□ -1.7
SIX4Q9UIU6 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
SIX4Q9UIU6 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC4.41□□□□□ -1.7
SIX4Q9UIU6 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
SIX4Q9UIU6 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
SIX4Q9UIU6 SNORA62.2-201ENST00000364672 152 ntBASIC4.41□□□□□ -1.7
SIX4Q9UIU6 CD2-201ENST00000369477 478 ntTSL 2 BASIC4.41□□□□□ -1.7
SIX4Q9UIU6 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
SIX4Q9UIU6 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
SIX4Q9UIU6 AL049545.1-201ENST00000401856 572 ntBASIC4.41□□□□□ -1.7
SIX4Q9UIU6 RNA5SP146-201ENST00000410743 123 ntBASIC4.41□□□□□ -1.7
SIX4Q9UIU6 GSTM3P2-201ENST00000412746 530 ntBASIC4.41□□□□□ -1.7
SIX4Q9UIU6 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC4.41□□□□□ -1.7
SIX4Q9UIU6 MTND5P25-201ENST00000430499 799 ntBASIC4.41□□□□□ -1.7
SIX4Q9UIU6 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC4.41□□□□□ -1.7
SIX4Q9UIU6 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC4.41□□□□□ -1.7
SIX4Q9UIU6 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC4.41□□□□□ -1.7
SIX4Q9UIU6 RPL5P32-201ENST00000454085 879 ntBASIC4.41□□□□□ -1.7
SIX4Q9UIU6 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC4.41□□□□□ -1.7
SIX4Q9UIU6 RPL36AP13-201ENST00000457490 317 ntBASIC4.41□□□□□ -1.7
SIX4Q9UIU6 XACT-201ENST00000468762 497 ntTSL 5 BASIC4.41□□□□□ -1.7
SIX4Q9UIU6 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC4.41□□□□□ -1.7
SIX4Q9UIU6 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC4.41□□□□□ -1.7
SIX4Q9UIU6 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC4.41□□□□□ -1.7
SIX4Q9UIU6 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC4.41□□□□□ -1.7
SIX4Q9UIU6 RNU7-143P-201ENST00000516781 65 ntBASIC4.41□□□□□ -1.7
SIX4Q9UIU6 HMGB1P19-201ENST00000517578 577 ntBASIC4.41□□□□□ -1.7
SIX4Q9UIU6 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC4.41□□□□□ -1.7
SIX4Q9UIU6 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC4.41□□□□□ -1.7
SIX4Q9UIU6 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC4.41□□□□□ -1.7
SIX4Q9UIU6 EMP1-206ENST00000537612 505 ntTSL 3 BASIC4.41□□□□□ -1.7
SIX4Q9UIU6 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC4.41□□□□□ -1.7
SIX4Q9UIU6 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC4.41□□□□□ -1.7
SIX4Q9UIU6 DYNLL1P4-201ENST00000549314 266 ntBASIC4.41□□□□□ -1.7
SIX4Q9UIU6 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC4.41□□□□□ -1.7
SIX4Q9UIU6 CYP4A43P-201ENST00000568156 121 ntBASIC4.41□□□□□ -1.7
SIX4Q9UIU6 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC4.41□□□□□ -1.7
SIX4Q9UIU6 MTND4LP24-201ENST00000572277 291 ntBASIC4.41□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 117.4 ms