Protein–RNA interactions for Protein: Q9UBP4

DKK3, Dickkopf-related protein 3, humanhuman

Predictions only

Length 350 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DKK3Q9UBP4 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC4.95□□□□□ -1.62
DKK3Q9UBP4 LSM5-205ENST00000409952 687 ntTSL 4 BASIC4.95□□□□□ -1.62
DKK3Q9UBP4 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC4.95□□□□□ -1.62
DKK3Q9UBP4 MTCO1P21-201ENST00000416634 589 ntBASIC4.95□□□□□ -1.62
DKK3Q9UBP4 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC4.95□□□□□ -1.62
DKK3Q9UBP4 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC4.95□□□□□ -1.62
DKK3Q9UBP4 Z99497.1-201ENST00000421282 135 ntBASIC4.95□□□□□ -1.62
DKK3Q9UBP4 OFD1P2Y-201ENST00000421895 1149 ntBASIC4.95□□□□□ -1.62
DKK3Q9UBP4 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC4.95□□□□□ -1.62
DKK3Q9UBP4 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC4.95□□□□□ -1.62
DKK3Q9UBP4 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC4.95□□□□□ -1.62
DKK3Q9UBP4 RPL23AP56-201ENST00000460778 453 ntBASIC4.95□□□□□ -1.62
DKK3Q9UBP4 RN7SL517P-201ENST00000462240 305 ntBASIC4.95□□□□□ -1.62
DKK3Q9UBP4 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC4.95□□□□□ -1.62
DKK3Q9UBP4 AC083829.1-201ENST00000503756 657 ntBASIC4.95□□□□□ -1.62
DKK3Q9UBP4 MYL12BP2-201ENST00000503948 512 ntBASIC4.95□□□□□ -1.62
DKK3Q9UBP4 Y_RNA.695-201ENST00000516715 107 ntBASIC4.95□□□□□ -1.62
DKK3Q9UBP4 Y_RNA.719-201ENST00000517156 106 ntBASIC4.95□□□□□ -1.62
DKK3Q9UBP4 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC4.95□□□□□ -1.62
DKK3Q9UBP4 AC106038.2-201ENST00000520706 568 ntBASIC4.95□□□□□ -1.62
DKK3Q9UBP4 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC4.95□□□□□ -1.62
DKK3Q9UBP4 PYM1-205ENST00000547925 499 ntTSL 3 BASIC4.95□□□□□ -1.62
DKK3Q9UBP4 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
DKK3Q9UBP4 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC4.95□□□□□ -1.62
DKK3Q9UBP4 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC4.95□□□□□ -1.62
DKK3Q9UBP4 AC011260.1-201ENST00000578420 472 ntBASIC4.95□□□□□ -1.62
DKK3Q9UBP4 RN7SL176P-201ENST00000580352 264 ntBASIC4.95□□□□□ -1.62
DKK3Q9UBP4 AL390838.2-201ENST00000602394 274 ntBASIC4.95□□□□□ -1.62
DKK3Q9UBP4 AC078795.2-201ENST00000602835 1252 ntBASIC4.95□□□□□ -1.62
DKK3Q9UBP4 AC107304.1-201ENST00000604229 296 ntBASIC4.95□□□□□ -1.62
DKK3Q9UBP4 AC090525.3-201ENST00000605601 189 ntBASIC4.95□□□□□ -1.62
DKK3Q9UBP4 AL136981.2-201ENST00000617319 734 ntBASIC4.95□□□□□ -1.62
DKK3Q9UBP4 BX005214.3-202ENST00000619809 325 ntBASIC4.95□□□□□ -1.62
DKK3Q9UBP4 AL607023.1-201ENST00000620045 248 ntBASIC4.95□□□□□ -1.62
DKK3Q9UBP4 AL590240.3-201ENST00000621416 943 ntBASIC4.95□□□□□ -1.62
DKK3Q9UBP4 AC009878.1-201ENST00000621819 340 ntBASIC4.95□□□□□ -1.62
DKK3Q9UBP4 AC008443.7-201ENST00000622195 246 ntBASIC4.95□□□□□ -1.62
DKK3Q9UBP4 MIR6715B-201ENST00000637172 77 ntBASIC4.95□□□□□ -1.62
DKK3Q9UBP4 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC4.95□□□□□ -1.62
DKK3Q9UBP4 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC4.95□□□□□ -1.62
DKK3Q9UBP4 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.95□□□□□ -1.62
DKK3Q9UBP4 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
DKK3Q9UBP4 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
DKK3Q9UBP4 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
DKK3Q9UBP4 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
DKK3Q9UBP4 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
DKK3Q9UBP4 FAP-203ENST00000443424 2598 ntTSL 2 BASIC4.95□□□□□ -1.62
DKK3Q9UBP4 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC4.95□□□□□ -1.62
DKK3Q9UBP4 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC4.94□□□□□ -1.62
DKK3Q9UBP4 AC012020.1-201ENST00000624541 1728 ntBASIC4.94□□□□□ -1.62
DKK3Q9UBP4 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC4.94□□□□□ -1.62
DKK3Q9UBP4 SLC2A3P1-201ENST00000519666 1451 ntBASIC4.94□□□□□ -1.62
DKK3Q9UBP4 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC4.94□□□□□ -1.62
DKK3Q9UBP4 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC4.94□□□□□ -1.62
DKK3Q9UBP4 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
DKK3Q9UBP4 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC4.94□□□□□ -1.62
DKK3Q9UBP4 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC4.94□□□□□ -1.62
DKK3Q9UBP4 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
DKK3Q9UBP4 Y_RNA.311-201ENST00000365068 96 ntBASIC4.94□□□□□ -1.62
DKK3Q9UBP4 OR5H15-201ENST00000383696 930 ntBASIC4.94□□□□□ -1.62
DKK3Q9UBP4 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
DKK3Q9UBP4 LAP3P1-201ENST00000403648 294 ntBASIC4.94□□□□□ -1.62
DKK3Q9UBP4 RNA5SP113-201ENST00000410486 84 ntBASIC4.94□□□□□ -1.62
DKK3Q9UBP4 RN7SKP222-201ENST00000410651 315 ntBASIC4.94□□□□□ -1.62
DKK3Q9UBP4 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC4.94□□□□□ -1.62
DKK3Q9UBP4 AF274854.1-201ENST00000413236 615 ntBASIC4.94□□□□□ -1.62
DKK3Q9UBP4 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
DKK3Q9UBP4 AC004022.2-201ENST00000413824 193 ntBASIC4.94□□□□□ -1.62
DKK3Q9UBP4 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC4.94□□□□□ -1.62
DKK3Q9UBP4 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC4.94□□□□□ -1.62
DKK3Q9UBP4 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC4.94□□□□□ -1.62
DKK3Q9UBP4 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC4.94□□□□□ -1.62
DKK3Q9UBP4 RPL21P110-201ENST00000433345 446 ntBASIC4.94□□□□□ -1.62
DKK3Q9UBP4 RPS24P1-201ENST00000438550 371 ntBASIC4.94□□□□□ -1.62
DKK3Q9UBP4 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC4.94□□□□□ -1.62
DKK3Q9UBP4 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC4.94□□□□□ -1.62
DKK3Q9UBP4 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC4.94□□□□□ -1.62
DKK3Q9UBP4 AURKAPS2-201ENST00000454983 333 ntBASIC4.94□□□□□ -1.62
DKK3Q9UBP4 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC4.94□□□□□ -1.62
DKK3Q9UBP4 RNU7-27P-201ENST00000459281 62 ntBASIC4.94□□□□□ -1.62
DKK3Q9UBP4 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
DKK3Q9UBP4 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC4.94□□□□□ -1.62
DKK3Q9UBP4 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
DKK3Q9UBP4 HSPE1P23-201ENST00000509838 286 ntBASIC4.94□□□□□ -1.62
DKK3Q9UBP4 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC4.94□□□□□ -1.62
DKK3Q9UBP4 RN7SKP46-201ENST00000515942 234 ntBASIC4.94□□□□□ -1.62
DKK3Q9UBP4 RNU6-1225P-201ENST00000516336 65 ntBASIC4.94□□□□□ -1.62
DKK3Q9UBP4 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC4.94□□□□□ -1.62
DKK3Q9UBP4 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC4.94□□□□□ -1.62
DKK3Q9UBP4 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
DKK3Q9UBP4 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC4.94□□□□□ -1.62
DKK3Q9UBP4 AC022880.1-201ENST00000534017 973 ntBASIC4.94□□□□□ -1.62
DKK3Q9UBP4 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC4.94□□□□□ -1.62
DKK3Q9UBP4 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC4.94□□□□□ -1.62
DKK3Q9UBP4 AC063949.1-201ENST00000552900 865 ntBASIC4.94□□□□□ -1.62
DKK3Q9UBP4 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC4.94□□□□□ -1.62
DKK3Q9UBP4 AC010546.1-201ENST00000569391 485 ntBASIC4.94□□□□□ -1.62
DKK3Q9UBP4 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC4.94□□□□□ -1.62
DKK3Q9UBP4 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC4.94□□□□□ -1.62
DKK3Q9UBP4 AP003465.2-201ENST00000602571 373 ntBASIC4.94□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 123.7 ms