Protein–RNA interactions for Protein: Q9P2D1

CHD7, Chromodomain-helicase-DNA-binding protein 7, humanhuman

Predictions only

Length 2,997 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7Q9P2D1 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC3.29□□□□□ -1.88
CHD7Q9P2D1 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
CHD7Q9P2D1 AC011287.1-204ENST00000640300 1213 ntTSL 5 BASIC3.29□□□□□ -1.88
CHD7Q9P2D1 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
CHD7Q9P2D1 AC104446.1-201ENST00000613728 1321 ntBASIC3.29□□□□□ -1.88
CHD7Q9P2D1 SLC38A9-218ENST00000512595 1756 ntTSL 2 BASIC3.29□□□□□ -1.88
CHD7Q9P2D1 AC139713.2-215ENST00000641428 5037 ntBASIC3.29□□□□□ -1.88
CHD7Q9P2D1 AC108206.1-201ENST00000570186 4159 ntBASIC3.29□□□□□ -1.88
CHD7Q9P2D1 TSPAN8-201ENST00000247829 1227 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
CHD7Q9P2D1 EIF4EP1-201ENST00000422311 642 ntBASIC3.29□□□□□ -1.88
CHD7Q9P2D1 AC005189.1-201ENST00000431286 310 ntBASIC3.29□□□□□ -1.88
CHD7Q9P2D1 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC3.29□□□□□ -1.88
CHD7Q9P2D1 AC069540.1-201ENST00000446320 988 ntBASIC3.29□□□□□ -1.88
CHD7Q9P2D1 AC104058.1-201ENST00000448028 297 ntBASIC3.29□□□□□ -1.88
CHD7Q9P2D1 AC021205.2-201ENST00000480069 347 ntBASIC3.29□□□□□ -1.88
CHD7Q9P2D1 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC3.29□□□□□ -1.88
CHD7Q9P2D1 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC3.29□□□□□ -1.88
CHD7Q9P2D1 RN7SKP116-201ENST00000516902 319 ntBASIC3.29□□□□□ -1.88
CHD7Q9P2D1 PCA3_2.1-201ENST00000612507 409 ntBASIC3.29□□□□□ -1.88
CHD7Q9P2D1 CASC15-208ENST00000636388 1174 ntTSL 5 BASIC3.29□□□□□ -1.88
CHD7Q9P2D1 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC3.29□□□□□ -1.88
CHD7Q9P2D1 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC3.29□□□□□ -1.88
CHD7Q9P2D1 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
CHD7Q9P2D1 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
CHD7Q9P2D1 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC3.28□□□□□ -1.88
CHD7Q9P2D1 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
CHD7Q9P2D1 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC3.28□□□□□ -1.88
CHD7Q9P2D1 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC3.28□□□□□ -1.88
CHD7Q9P2D1 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC3.28□□□□□ -1.88
CHD7Q9P2D1 RPL21P109-201ENST00000422213 475 ntBASIC3.28□□□□□ -1.88
CHD7Q9P2D1 MYL8P-204ENST00000431574 518 ntBASIC3.28□□□□□ -1.88
CHD7Q9P2D1 SEPT14P1-201ENST00000458703 648 ntBASIC3.28□□□□□ -1.88
CHD7Q9P2D1 AC013652.1-202ENST00000561058 570 ntTSL 4 BASIC3.28□□□□□ -1.88
CHD7Q9P2D1 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.28□□□□□ -1.88
CHD7Q9P2D1 AC023394.1-201ENST00000578673 312 ntTSL 5 BASIC3.28□□□□□ -1.88
CHD7Q9P2D1 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC3.28□□□□□ -1.88
CHD7Q9P2D1 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC3.28□□□□□ -1.88
CHD7Q9P2D1 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
CHD7Q9P2D1 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC3.28□□□□□ -1.88
CHD7Q9P2D1 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC3.28□□□□□ -1.88
CHD7Q9P2D1 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC3.28□□□□□ -1.88
CHD7Q9P2D1 RNA5SP184-201ENST00000411071 108 ntBASIC3.28□□□□□ -1.88
CHD7Q9P2D1 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC3.28□□□□□ -1.88
CHD7Q9P2D1 YWHAQP9-201ENST00000445891 512 ntBASIC3.28□□□□□ -1.88
CHD7Q9P2D1 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.28□□□□□ -1.88
CHD7Q9P2D1 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC3.28□□□□□ -1.88
CHD7Q9P2D1 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC3.28□□□□□ -1.88
CHD7Q9P2D1 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
CHD7Q9P2D1 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC3.28□□□□□ -1.88
CHD7Q9P2D1 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
CHD7Q9P2D1 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
CHD7Q9P2D1 AC009963.1-201ENST00000417265 157 ntBASIC3.27□□□□□ -1.89
CHD7Q9P2D1 AC233981.1-201ENST00000423224 461 ntBASIC3.27□□□□□ -1.89
CHD7Q9P2D1 SKP1P1-201ENST00000438081 489 ntBASIC3.27□□□□□ -1.89
CHD7Q9P2D1 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC3.27□□□□□ -1.89
CHD7Q9P2D1 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC3.27□□□□□ -1.89
CHD7Q9P2D1 TRBV12-1-201ENST00000479785 344 ntBASIC3.27□□□□□ -1.89
CHD7Q9P2D1 PPP1R11P1-201ENST00000486095 376 ntBASIC3.27□□□□□ -1.89
CHD7Q9P2D1 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC3.27□□□□□ -1.89
CHD7Q9P2D1 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC3.27□□□□□ -1.89
CHD7Q9P2D1 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC3.27□□□□□ -1.89
CHD7Q9P2D1 AC138761.3-201ENST00000579993 334 ntBASIC3.27□□□□□ -1.89
CHD7Q9P2D1 AL590808.1-201ENST00000618696 141 ntBASIC3.27□□□□□ -1.89
CHD7Q9P2D1 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
CHD7Q9P2D1 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
CHD7Q9P2D1 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
CHD7Q9P2D1 ANP32BP2-201ENST00000454525 545 ntBASIC3.27□□□□□ -1.89
CHD7Q9P2D1 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.27□□□□□ -1.89
CHD7Q9P2D1 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC3.27□□□□□ -1.89
CHD7Q9P2D1 AC007619.2-201ENST00000605743 379 ntBASIC3.27□□□□□ -1.89
CHD7Q9P2D1 OSBPL9P4-201ENST00000371707 1800 ntBASIC3.27□□□□□ -1.89
CHD7Q9P2D1 AL049780.3-201ENST00000624612 1583 ntBASIC3.27□□□□□ -1.89
CHD7Q9P2D1 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC3.27□□□□□ -1.89
CHD7Q9P2D1 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
CHD7Q9P2D1 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
CHD7Q9P2D1 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
CHD7Q9P2D1 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.27□□□□□ -1.89
CHD7Q9P2D1 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
CHD7Q9P2D1 RNU6-304P-201ENST00000364855 107 ntBASIC3.27□□□□□ -1.89
CHD7Q9P2D1 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC3.27□□□□□ -1.89
CHD7Q9P2D1 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC3.27□□□□□ -1.89
CHD7Q9P2D1 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC3.27□□□□□ -1.89
CHD7Q9P2D1 AK5-208ENST00000478255 556 ntTSL 2 BASIC3.27□□□□□ -1.89
CHD7Q9P2D1 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC3.27□□□□□ -1.89
CHD7Q9P2D1 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
CHD7Q9P2D1 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC3.26□□□□□ -1.89
CHD7Q9P2D1 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC3.26□□□□□ -1.89
CHD7Q9P2D1 RNU6-851P-201ENST00000384565 107 ntBASIC3.26□□□□□ -1.89
CHD7Q9P2D1 MIR504-201ENST00000385065 83 ntBASIC3.26□□□□□ -1.89
CHD7Q9P2D1 MIR9-1-201ENST00000385198 89 ntBASIC3.26□□□□□ -1.89
CHD7Q9P2D1 ELOCP18-201ENST00000434209 337 ntBASIC3.26□□□□□ -1.89
CHD7Q9P2D1 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC3.26□□□□□ -1.89
CHD7Q9P2D1 AP002812.4-201ENST00000532139 286 ntBASIC3.26□□□□□ -1.89
CHD7Q9P2D1 MIR4524B-201ENST00000581569 115 ntBASIC3.26□□□□□ -1.89
CHD7Q9P2D1 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC3.26□□□□□ -1.89
CHD7Q9P2D1 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
CHD7Q9P2D1 AC018529.3-201ENST00000624212 2254 ntBASIC3.26□□□□□ -1.89
CHD7Q9P2D1 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC3.26□□□□□ -1.89
CHD7Q9P2D1 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
CHD7Q9P2D1 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 99.1 ms